KEGG   Ailuropoda melanoleuca (giant panda): 100484974
Entry
100484974         CDS       T01329                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 2 chain
  KO
K06752  MHC class II antigen
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04145  Phagosome
aml04514  Cell adhesion molecules
aml04612  Antigen processing and presentation
aml04640  Hematopoietic cell lineage
aml04658  Th1 and Th2 cell differentiation
aml04659  Th17 cell differentiation
aml04672  Intestinal immune network for IgA production
aml04940  Type I diabetes mellitus
aml05140  Leishmaniasis
aml05145  Toxoplasmosis
aml05150  Staphylococcus aureus infection
aml05152  Tuberculosis
aml05164  Influenza A
aml05166  Human T-cell leukemia virus 1 infection
aml05168  Herpes simplex virus 1 infection
aml05169  Epstein-Barr virus infection
aml05310  Asthma
aml05320  Autoimmune thyroid disease
aml05321  Inflammatory bowel disease
aml05322  Systemic lupus erythematosus
aml05323  Rheumatoid arthritis
aml05330  Allograft rejection
aml05332  Graft-versus-host disease
aml05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100484974
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100484974
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100484974
   04612 Antigen processing and presentation
    100484974
   04658 Th1 and Th2 cell differentiation
    100484974
   04659 Th17 cell differentiation
    100484974
   04672 Intestinal immune network for IgA production
    100484974
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100484974
   05164 Influenza A
    100484974
   05168 Herpes simplex virus 1 infection
    100484974
   05169 Epstein-Barr virus infection
    100484974
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100484974
   05152 Tuberculosis
    100484974
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100484974
   05140 Leishmaniasis
    100484974
  09163 Immune disease
   05310 Asthma
    100484974
   05322 Systemic lupus erythematosus
    100484974
   05323 Rheumatoid arthritis
    100484974
   05320 Autoimmune thyroid disease
    100484974
   05321 Inflammatory bowel disease
    100484974
   05330 Allograft rejection
    100484974
   05332 Graft-versus-host disease
    100484974
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100484974
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100484974
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100484974
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100484974
  Exosomal proteins of epithelial cells
   100484974
  Exosomal proteins of breast milk
   100484974
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 C2-set_2 ig Ig_2 Marek_A CSLinker
Other DBs
NCBI-GeneID: 100484974
NCBI-ProteinID: XP_034516404
UniProt: A0A7N5KM11
LinkDB
Position
5:complement(28009682..28019546)
AA seq 273 aa
MFPVTPGKMAPWIPRGLWTAAVMMILVVLSVPVAEGRDSPQDFVFQFKGECYFTNGTERV
RLLARYIYNREEFLRYDDDVGEHRPVTELGRSWAEDFNQQKDFMERKRAEVDTVCRHNYQ
IEDRFILQRRVEPTVTISPSRTEVLNHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVS
TPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSESARSKMLSGIG
GFVLGLIFLGLGLIIRHRSQKGPRGSPPAGLLC
NT seq 822 nt   +upstreamnt  +downstreamnt
atgttcccagtgacgcctgggaagatggcaccgtggatccccagaggcctctggacagca
gctgtgatgatgatcctggtggtgctgagcgtcccagtggctgagggcagagactctcca
caggatttcgtgttccagtttaagggcgagtgctacttcaccaacgggacggagcgggtg
cggctactggccagatacatctataaccgggaggagttcctgcgctacgacgacgacgtg
ggggagcaccggccggtgacggagctggggcggtcctgggccgaggacttcaaccagcag
aaggacttcatggagcggaagcgggccgaggtggacacggtgtgcagacacaactaccag
attgaggacaggttcatcctgcagcggcgagtggaacctacagtgaccatctccccatcc
aggacggaggttctgaaccaccacaatctgctggtctgctcagtgacagatttctaccca
ggccagatcaaggttcggtggtttcggaatgaccaggaagagacagctggtgtcgtgtcc
actccacttattaggaatggggactggaccttccagatcctggtgatgctggaaatgact
ccccagcgaggagatgtctacacctgccatgtggagcatcccagcctccagagccccatc
acggtggagtggcgggcacagtctgaatctgcccggagcaagatgctgagtggcatcgga
ggctttgtgctggggctgatcttccttgggctgggccttatcatccgtcacaggagccag
aaaggacctcgtgggtctcccccagcagggctcctgtgctga

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