KEGG   Amycolatopsis mediterranei S699: RAM_29775
Entry
RAM_29775         CDS       T01822                                 
Name
(GenBank) hypothetical protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
amn  Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:amn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amn02048]
    RAM_29775
Prokaryotic defense system [BR:amn02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    RAM_29775
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: AEK44430
UniProt: A0A9R0UB76
LinkDB
Position
complement(6445610..6446320)
AA seq 236 aa
MTHTLALCFDAPMQSWGLRSRGILRDTAREPTKSGVVGLLAAATGVERDDEAGIATLAAL
RLGVRVDREGLLERDYHTTQNVPTTTGSGHRTVVSERYYLADALFLVAIEGPETLLSELA
DAVTNPRWPLFFGRRAFVSARPLFDDGLHAGNLEQILREHRWLEHPDRAGAMIPGQQQIA
LRTVVDCPTGTVGAEPRHDVPRSFAHGARSFATRTVLVGEVPLTDNMIPAGDTTCS
NT seq 711 nt   +upstreamnt  +downstreamnt
atgacccacacgctggcgctgtgcttcgacgcccccatgcagtcctggggtctacgctcc
cgcggcatcttgcgtgacaccgcccgagaacccaccaaatccggagtcgtcggactgctg
gccgctgccaccggagtcgaacgcgacgacgaagccggcatcgccacgctggccgcgctg
cgtctcggtgtccgcgtcgaccgggaaggcctgctcgaacgggactaccacaccacgcag
aacgtgcccaccacaaccggatccgggcaccgcacggtcgtcagcgaacgctactacctc
gccgacgccctgttcctcgtcgcgatcgaaggaccagaaaccctgctcagcgagctggcc
gatgcggtaacgaaccctcgctggccgctgttctttggccgccgcgccttcgtgtccgcc
cgtccgctgtttgacgacggtctccatgctggcaaccttgagcagatcctgcgtgagcac
cgctggctcgaacaccccgaccgagccggtgcgatgatcccaggtcagcagcagatcgcc
ttacgcaccgttgtcgactgtccgaccggcaccgtgggtgccgaaccacgtcacgacgtc
ccccgctccttcgcccacggtgcccgtagcttcgccactcgcacggtactcgtcggcgaa
gtcccgctgaccgacaacatgatccccgccggagacaccacgtgttcctga

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