KEGG   Amycolatopsis mediterranei S699: RAM_40855
Entry
RAM_40855         CDS       T01822                                 
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
  KO
K01616  multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
Organism
amn  Amycolatopsis mediterranei S699
Pathway
amn00020  Citrate cycle (TCA cycle)
amn00630  Glyoxylate and dicarboxylate metabolism
amn00785  Lipoic acid metabolism
amn01100  Metabolic pathways
amn01110  Biosynthesis of secondary metabolites
amn01120  Microbial metabolism in diverse environments
amn01200  Carbon metabolism
amn01210  2-Oxocarboxylic acid metabolism
Module
amn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
amn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:amn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    RAM_40855 (kgd)
   00630 Glyoxylate and dicarboxylate metabolism
    RAM_40855 (kgd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RAM_40855 (kgd)
Enzymes [BR:amn01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.4  With a disulfide as acceptor
    1.2.4.2  oxoglutarate dehydrogenase (succinyl-transferring)
     RAM_40855 (kgd)
 2. Transferases
  2.2  Transferring aldehyde or ketonic groups
   2.2.1  Transketolases and transaldolases
    2.2.1.5  2-hydroxy-3-oxoadipate synthase
     RAM_40855 (kgd)
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.61  dihydrolipoyllysine-residue succinyltransferase
     RAM_40855 (kgd)
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.71  2-oxoglutarate decarboxylase
     RAM_40855 (kgd)
SSDB
Motif
Pfam: E1_dh 2-oxoacid_dh OxoGdeHyase_C Transket_pyr 2-oxogl_dehyd_N
Other DBs
NCBI-ProteinID: AEK46638
UniProt: A0A9R0P5B5
LinkDB
Position
8746225..8749932
AA seq 1235 aa
MSSSSPASQFGPNEWLVEEMYDQFLADPSSVDAAWHDFFADFKPTQSAQAKADTARQQQA
GAKPAANGQAAQPSAKAVQNAESAAKQSSTAPAAKPAPAKAAPKQAPKPAAKAEPKAEAK
KEEPESKQLRGAAAAIAKNMDASLSVPTATSVRAVPAKLMADNRIVINNHLKRTRGGKIS
FTHLIGYAMVRALKAYPNMNRHYQLIDGKPFAITPEHVNFGLAIDMKGKDGSRTLVVASI
KGCEDMSFLQFWQAYEDIVKKARNNKLTADDFSGTTISLTNPGGIGTNHSVPRLQAGQGA
IIGVGAMQYPAAFEGTSEKTLVDLGISKIMTLTSTYDHRIIQGAESGEFLKRIHQLLLGE
DGFYDDVFTSLRLPYEPIRWVADIPDGPVDKTARVIELIDAFRMRGHLMADTDPLNYRQR
SHADLDVLSHGLTLWDLDREFPVGGFAGQERMKLRDILGVLRNSYCRTVGIEYTHILDPE
ERRWIQERVEIPHEKPDPAVQKYVLSKLNAAEAFETFLQTKYVGQKRFSLEGGETAIPLL
DTILDKAAEHELDEVVIGMPHRGRLNVLANIVGKPISQIFQEFEGNLDPGQAHGSGDVKY
HLGAEGKYFRMFGDGETKVSLTANPSHLETVDPVLEGIVRAKQDILDKGGEGYTVLPVLM
HGDAAFAGQGVVAETLNLSLLRGYRTGGTVHVIVNNQVGFTTAPEHSRSSQYATDVAKMI
GSPIFHVNGDDPEAAHWVAKLAVEYRQAFHKDVVIDLICYRRRGHNEGDDPSMTQPAMYD
IIDTKRSVRKTYTESLIGRGDISVEEAEAALRDFSSQLEHVFNEVRELEKHPAKASPSVE
EEQQVPAKVATAITGKTLEHIGDAFVNVPDGFTPHPRVKPVMERRHKMSREGDIDWAFGE
LLAFGSLAMEGRLVRLSGQDSRRGTFTQRHSVFIDRKTGQEYSPLQNLADGQGRVMIYDS
ALSEYAAVGFEYGYSVANPESLVMWEAQFGDFVNGAQTVIDEYISSGEAKWGQRSDVVLL
LPHGHEGQGPDHTSGRIERFLSLCAEGSMTVAVPSTPANYFHLLRRHALDGIQRPLVVFT
PKSMLRNKAATSPTEDFTGESRFMSVIDDVTPDPAKIRKVLLTSGKLYWELVAERTKREA
DDVAIVRIEQYYPLPKKKLLAALERYTNATQVAWVQEEPENQGAWPFFGLNLPRKFPEVL
SGLQVVSRRPMAAPSAGSSKVHEVEQKALIAKAFD
NT seq 3708 nt   +upstreamnt  +downstreamnt
gtgtccagcagcagccctgcgtcacagttcggccccaacgagtggctggtcgaagagatg
tacgaccagttcctcgcagacccttcttcagtcgatgccgcctggcacgacttcttcgcg
gacttcaagccgacgcagagcgcgcaggccaaggcggacaccgcccggcagcagcaggcc
ggagccaagccggcggccaacggccaggcggcgcagccctcggccaaggccgtgcagaac
gcggagtcggcggccaagcagtcgtcgacggcgccggccgccaagccggcccccgcgaag
gcggccccgaagcaggcgccgaagccggccgcgaaggccgagcccaaggccgaagcgaag
aaggaagagccggagtcgaagcagctgcgcggcgccgcggcggccatcgccaagaacatg
gacgcctcgctgagcgtccccaccgcgaccagcgtgcgcgcggtcccggcgaagctgatg
gcggacaaccgcatcgtcatcaacaaccacctcaagcgcacccgcggcggcaagatctcc
ttcacgcacctcatcggctacgccatggtgcgggcgctgaaggcgtacccgaacatgaac
cggcactaccagctgatcgacgggaagccgttcgcgatcacgccggagcacgtcaacttc
gggctcgcgatcgacatgaagggcaaggacggctcccgcacgctcgtcgtggcctcgatc
aagggctgcgaggacatgtcgttcctgcagttctggcaggcctacgaggacatcgtcaag
aaggcccgcaacaacaagctcaccgccgacgacttctccggcaccacgatctcgctgacc
aacccgggcggcatcggcaccaaccactcggtgccgcgcctgcaggccggccaaggcgcc
atcatcggcgtcggcgccatgcagtacccggccgccttcgagggcaccagcgagaagacg
ctggtcgacctcggcatcagcaagatcatgacgctgacctcgacctacgaccaccgcatc
atccagggcgcggagtcgggcgagttcctcaagcgcatccaccagctgctgctcggcgag
gacggcttctacgacgacgtcttcaccagcctgcgcctgccgtacgagccgatccgctgg
gtcgccgacatcccggacggcccggtcgacaagaccgcccgcgtgatcgagctgatcgac
gcgttccggatgcgcggccacctgatggccgacaccgacccgctgaactaccgccagcgc
agccacgcggacctggacgtgctgtcccacggtctcacgctctgggacctcgaccgcgag
ttcccggtcggcggcttcgccggccaggagcggatgaagctgcgcgacatcctcggcgtg
ctgcgcaactcgtactgccgcacggtcggcatcgagtacacccacatcctcgaccccgag
gagcgccgctggatccaggagcgcgtcgagatcccgcacgagaagccggaccccgcggtc
cagaagtacgtgctctcgaagctgaacgccgccgaggcgttcgagacgttcctgcagacc
aagtacgtcggccagaagcggttctcgctcgagggcggcgagacggcgatcccgctgctc
gataccatcctcgacaaggccgccgagcacgagctcgacgaggtcgtcatcggcatgccg
caccgcgggcggctgaacgtgctggcgaacatcgtcggcaagccgatcagccagatcttc
caggagttcgagggcaacctcgacccgggccaggcgcacggctccggtgacgtgaagtac
cacctcggcgccgagggcaagtacttccggatgttcggcgacggcgagaccaaggtgtcg
ctgacggcgaacccgtcccacctggagacggtcgacccggtgctcgagggcatcgtccgc
gccaagcaggacatcctggacaagggcggcgagggctacaccgtgctgccggtcctgatg
cacggcgacgcggccttcgcgggccagggcgtcgtcgccgagacgctgaacctgtcgctg
ctgcgcgggtaccgcaccggcggcaccgtgcacgtcatcgtcaacaaccaggtcggcttc
acgaccgcgccggagcactcgcgctcgtcgcagtacgccaccgacgtcgcgaagatgatc
ggctcgccgatcttccacgtgaacggcgacgaccccgaagccgcgcactgggtggccaag
ctcgccgtcgagtaccgccaggcgttccacaaggacgtcgtcatcgacctgatctgctac
cgccgccgcggccacaacgagggcgacgacccctcgatgacgcagccggcgatgtacgac
atcatcgacaccaagcgttcggtgcggaagacctacaccgagtcgctgatcggccgcggc
gacatctccgtcgaggaggccgaggccgcgttgcgcgacttctcgagccagctggagcac
gtcttcaacgaggtgcgtgagctggaaaagcacccggcgaaggccagcccctccgtcgag
gaggagcagcaggtgccggccaaggtggcgacggcgatcaccggcaagacgctggagcac
atcggcgacgcgttcgtgaacgtgccggacggcttcaccccgcacccgcgcgtcaagccg
gtcatggagcgccgccacaagatgtcccgcgagggcgacatcgactgggcgttcggcgag
ctgctggcgttcgggtcgctggcgatggaaggccggctggtccggctgtccggccaggac
tcgcgccgcggcacgttcacccagcggcactcggtgttcatcgaccgcaagaccggccag
gagtactcgccgctgcagaacctggccgacggccagggccgcgtgatgatctacgactcg
gcgctgtcggagtacgcggccgtcggcttcgagtacggctactcggtggccaaccccgag
tcgctggtcatgtgggaagcgcagttcggcgacttcgtcaacggcgcccagacggtgatc
gacgagtacatctcctccggcgaggccaagtggggccagcgttcggacgtcgtgctgctg
ctgccgcacggccacgagggccagggcccggaccacacgtccggccgcatcgagcgcttc
ctctcgctgtgcgcggagggctcgatgacggtggcggtcccgtcaaccccggcgaactac
ttccacctgctgcgccgccacgccctcgacggcatccagcgcccgctggtcgtcttcacg
ccgaagtcgatgctgcgcaacaaggccgcgacctcgccgaccgaggacttcaccggcgaa
agccggttcatgtccgtcatcgacgacgtcaccccggacccggcgaagatccgcaaggtg
ctgctgacctccgggaagctgtactgggagctggtggcggagcggacgaagcgcgaggcc
gacgacgtcgcgatcgtgcggatcgagcagtactacccgctgccgaagaagaagctgctg
gcggcgctggagcgctacacgaacgcgacgcaggtcgcgtgggtccaggaggagccggaa
aaccagggtgcgtggccgttcttcggcctgaacctgccccggaagttcccggaggtgctc
tcgggcctgcaggtcgtgtcgcgccgcccgatggcggccccgtcggccggctcgtcgaag
gtgcacgaggtcgagcagaaggcgctgatcgcgaaggcgttcgactga

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