Amycolatopsis mediterranei S699: RAM_42550
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Entry
RAM_42550 CDS
T01822
Name
(GenBank) two-component system response regulator
KO
K18352
two-component system, OmpR family, response regulator VanR
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn01502
Vancomycin resistance
amn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAM_42550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RAM_42550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
amn02022
]
RAM_42550
01504 Antimicrobial resistance genes [BR:
amn01504
]
RAM_42550
Two-component system [BR:
amn02022
]
OmpR family
VanS-VanR (actinomycete type vancomycin resistance)
RAM_42550
Antimicrobial resistance genes [BR:
amn01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RAM_42550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
bPH_6
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-ProteinID:
AEK46977
UniProt:
A0A9R0P5Z5
LinkDB
All DBs
Position
9113204..9113881
Genome browser
AA seq
225 aa
AA seq
DB search
MRVLIVEDEPYLADAIRDGLRLEAIAADTAGDGDTALELLSVNTYDIAVLDRDIPGPSGD
EIARQIVASGSGMPILMLTAADRLDDKATGFGLGADDYLTKPFELRELVLRLRALDRRRA
HNRPPVHEIAGLRLDPFRREVYRDGRYVALTRKQFAVLEVLVAAGGGVISAEELLERAWD
ENADPFTNAVRITVSVLRKRLGEPGIIATVPGVGYRIDTGGEHRG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgtcttgatcgtcgaggacgagccctacctggccgacgccatccgcgacggcctc
cggctggaggccatcgcggcggacaccgccggagacggcgacaccgcgctggaactgctg
agcgtcaacacctacgacatcgccgtcctggaccgcgacatccccggcccgtccggtgac
gaaatcgcccggcagatcgtcgcctccggcagcgggatgccgatcctcatgctcaccgcc
gccgaccggctcgacgacaaggccaccgggttcgggctcggcgccgacgactacctcacg
aagccgttcgaactccgggaactcgtgctccggctccgggcgctggaccggcggcgtgcg
cacaaccggcccccggtgcacgaaatcgccgggttacgtctggatccgttccgccgggag
gtctaccgcgacggccggtacgtggccctgacgcgcaagcagttcgccgtgctcgaagtc
ctcgtggcggccggaggcggggtgatcagcgccgaagaactgctggaacgggcgtgggac
gagaacgcggacccgttcaccaacgccgtgcgcatcacggtttccgtgctgcgcaaacgg
ctcggcgaacccgggatcatcgcgaccgtgcccggcgtcggctaccgcatcgacaccggg
ggcgagcaccgtggatag
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