Anopheles marshallii: 128718448
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Entry
128718448 CDS
T10928
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
amrs Anopheles marshallii
Pathway
amrs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128718448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amrs03400
]
128718448
Enzymes [BR:
amrs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
128718448
DNA repair and recombination proteins [BR:
amrs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128718448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
128718448
NCBI-ProteinID:
XP_053668050
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All DBs
Position
X:6651820..6654643
Genome browser
AA seq
919 aa
AA seq
DB search
MSVKQESFSELSSLLEKVRQSPLHVKETVMRKFFQDFERYRQSFGDVGNQPSIYPWLRLL
LPGMDRERKAYGLRERTLAEAYIRALGLDRRNEKVQQLLGTGNDLAERLAPLLHGRCPAD
GDLTVGDVNSRLDAIGEGGRVVAARDALVTLIERGSPLDQRWLVRIVLKNLRLGVSNRRI
LQLYHPNAPTLYDGASDLKQMVQLIETKAPEAMETAAGSGGVVLLTHFIRPMLCQRVELR
QVGELLRKDTYWLETKMDGERFQVHWDGTSFRYYSRNGHDYSEAFGQTPDQVSGTLTPML
ATLLAPSTRDIILDGEMMVFDRRDLRYRDKCDGTDVKALRPGNANLRPCFCVYDVLYHNG
RSLTSVPYAERARLLTNVIREQFGFVKHCHRERVRDEDHLIELINAAIDAQQEGVVLKRE
DALYQPNRRAGTGWYKIKPDYIDGLVVDFDLLVLGGFYNMRRTYVNALLVGVARGPGEYV
SVAKVSMGLGVAEWQQLNQSLRPHWRTEPLEGLHCGRTQPDVWITPTNSIVLQLKGSELV
RSDSYGAGFTIRFPRIVTTRADKLPDEVCTLEELQQLGTNTAGSAVQTDTRKATKLAKRH
VTLEDLNAPAPVKQTKSGRKRVITVERTLIADHRDVSPLPDGMLQGRDVCVMSVGTQTGA
PSIDALERLVRRHGGRAVANPSPDTYAIVAGRVTFKVRKYMETGRWDVVQDGWLLRAGLD
GRLEPFRPEDILAATETTRMKLTEQYDRYGDSYTRPTTPTTFGALLRRMTGDGEQGPMTS
QLTGLETVRAEATLLGVRQATRRRLFRGVNARLYQNRDGPVLRTGEDEALVGVDAYRAQR
AMLRFVMHGGQWLRDTEPGPVRYVFVASPVEVLEVEEWIDTVTGTNKSVLPKLLRVQWIG
RSIEAGRLYDETYFTYNDF
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaagcaggaatcgttcagtgagctaagctccctgttggagaaggttcgccaa
tcaccgctgcacgtgaaggaaacggtgatgcgaaagtttttccaagactttgaacgctac
cgtcaatcgtttggggatgtgggaaatcaaccttcaatctacccatggttacggctgctg
ctgcctggcatggaccgtgaacggaaggcgtacggtttgcgtgaacgaaccctggccgag
gcgtacattcgtgcactcgggctcgatcggcgcaatgaaaaagtgcagcagttgttggga
acgggtaatgatttggcggaacggttagcaccattgctgcatggtcgttgtccggctgac
ggtgatctgaccgtcggtgatgtaaatagccggctggatgcgatcggtgaaggtggtcga
gtggtggcagcgcgcgatgcgctggtgacattgattgaacggggcagtccactcgatcag
cggtggctggtgcggatagtactgaagaatttgcgactaggcgtgagcaaccgtcgtata
ttacagctgtaccacccgaacgcaccgacgctgtacgatggtgccagtgatttgaaacag
atggtgcagctgatcgaaacgaaggcaccagaagcgatggaaactgcagctggtagtggt
ggtgtggtgctgctaacacactttatccgtccgatgctgtgccagcgagtggaacttcgt
caggttggtgagttgttgcgtaaggatacgtactggctcgagacaaagatggacggggag
cggttccaggtgcactgggatggaacttcgtttcggtactactccaggaacgggcacgac
tacagtgaagcgttcggtcagacgccggatcaggtgagtggtacattgacacccatgctc
gcaacactgctcgctccatccacccgtgacatcatcttggacggtgagatgatggtgttc
gatcggcgtgatcttcgctatcgggataagtgtgatgggacggacgtaaaagcactccga
ccgggcaatgcaaatcttcgaccatgcttttgcgtgtacgatgtgctttaccataatgga
cgttcgcttaccagcgtaccgtacgccgaacgggcccgactactaacgaacgtgatacgg
gaacagttcgggtttgtaaaacattgccatcgggagcgggtacgtgatgaggaccatctg
atcgagctaattaatgcggccatcgatgcgcagcaggagggtgtggtgttgaagcgtgag
gacgcactgtaccaaccgaatcgacgggctggcaccggttggtacaagatcaaacccgac
tacatcgacggactggtggtggactttgatctgctcgtgctaggcggtttttacaatatg
cgccgaacgtacgtgaacgcattgctggtcggtgtggctcgcggtcccggtgagtacgtc
tcggtggcgaaggtttcgatggggctcggagtggccgaatggcaacagcttaaccaatcc
ctacgaccacactggcggacagaaccgctcgaaggattgcactgtggtcgcacccagccc
gatgtgtggattacgcccaccaactcgatcgtgctgcagctgaaaggttccgagctggta
cggagtgattcgtatggggccggttttacgatacgcttcccgcgcatcgttaccacgcgt
gccgataagctgccggacgaggtgtgtacgctggaggagttacagcagctcggcaccaac
actgctggcagtgcggtacaaacggacacgcgcaaagcgacaaagcttgccaagcggcac
gtaacgctggaggatttaaatgcacccgcaccggtaaaacaaacaaagtccggtaggaaa
cgtgtgataacggtggagcgaacgttgatcgcggaccaccgggacgtatcacccttgccg
gatgggatgctgcagggtcgggatgtgtgtgtgatgagcgtcggcacacagaccggcgca
ccgtcgatcgatgcgttggaaaggttggtgcgacggcacggtggccgcgctgttgctaac
cccagcccggacacgtacgccatcgttgccggccgggtaacgttcaaggtgcgcaagtac
atggaaacgggccggtgggatgtggtgcaggacggttggttgttacgggccgggctggac
ggccggttggaaccgttccggccggaggatatactcgccgcaacggaaacgacccggatg
aagctgaccgagcagtacgatcgctacggtgactcatacacgcgtcccaccacacctaca
acctttggcgcgttgcttcgccgcatgaccggggacggtgagcaaggaccgatgacgtcc
cagctgaccggtttggaaacggtacgggccgaggcgaccctgttgggtgtgcggcaagcg
acaaggaggcgtttgtttcggggtgttaacgcacggctctaccagaaccgggacggtccg
gtgctaaggacgggcgaggacgaagctttggtgggtgtggacgcgtaccgggcacagcgt
gcaatgttgcggttcgtgatgcacggtggccagtggttgcgcgatacggaacccggtccg
gtcaggtacgtgtttgtggcgtcgccggtcgaggtgcttgaggtggaagaatggattgac
acggtgaccggtacgaataaaagcgtcctaccgaagcttttacgcgtgcaatggatcgga
cgatccatcgaggccggacggctgtatgacgagacctattttacctacaatgacttctga
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