Akanthomyces muscarius: LMH87_006822
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Entry
LMH87_006822 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
amus
Akanthomyces muscarius
Pathway
amus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMH87_006822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amus03041
]
LMH87_006822
Spliceosome [BR:
amus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
LMH87_006822
Complex C
U5 SnRNP specific factors
LMH87_006822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
DUF6716
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
80893981
NCBI-ProteinID:
XP_056060094
UniProt:
A0A9W8QP18
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Position
1:<5384016..>5387086
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AA seq
981 aa
AA seq
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MDDLYDEFGNFIGEEVESEAGSDAGVDAGDYVYDDATGDIQDDEELMEVDDGPSNAVILH
EDKQYYPTAEQVYGQDVETRVEEEDAQPLTQPIIAPIETKKFTIEEEDLPPVYYSREFMT
DLMNFPDQIRNVALAGHLHHGKTAFTDMLVLETHDILEKLDKRVGRKRDEALRYTDIHIL
ERERGVSLKSSPMSFVLPNSKGKSHLVNVIDTPGHVNFVDEVAAAFRLVDGVCLVVDVVE
GVQINTEQIIKHAVLQDLPLTLIVNKMDRLIVELRLPPKDAYFKLKHVIEEVNTIITNTA
PAASAAKRISPEKGNVLFACTDMGWCFTLQSFAKMYADTYGDVSAEDLAKRLWGDVYFNP
RKRTFSRKPLEDRTSRSFVHFVLEPIYKIFTHSISDSPEDLRPVLESLGIQLKPAQYKAD
AKVILRLVCEQFFGPSTGFVDMLVQHVPSPVESVQRLLERHYTGPLDSKVAGSMLQCNQD
GPLVVHIAKLFNKPDAKSFYSFGRVLSGTARPGMQVRVLGEGYSLDDEEDMTMTTINQVF
IGETRYNIPTDGVPAGNLVLLDGVDNSIVKTATIVAPKLEDDEDAYIFKPINHFTESVLK
VAVEPINPSELPKMLDGLRKIQKSYPLLNTKVEESGEHIIIGTGELYMDCVLHDLRRLYA
DMDIKVSDPVTRFCETVVETSATKCYAITPNKKNKITMVAEQLEKGISTDIETGAVKIRD
PIKKTAKFFEENHGWDKLAARSIWAFGPDEAGPNILQDDTLPTEVDKKLLNTVRESIRQG
FSWATREGPLCEEPIRNTKFKVTDIVLAGEAIFRGGGQIIPTSRRACYSSFLMASPRLME
PVYAVSVTGPEDSYMEVYNVLARRRGHVLSDGPVTGTPLYRVNGLLPVVDSFGFEADLRI
KTQGSSMVSLVFDSWSIVPGDPLDREQVIRPLQPAAVQATARDFVLKTRRRKGLSEDVSV
KTFLEPEFYQSLMESGMLGEL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctatatgacgagttcggcaacttcattggcgaggaagtcgagtcggaggcg
ggctccgacgcgggcgttgatgccggtgattatgtctatgatgacgcgaccggcgacatt
caggatgatgaggagctcatggaggttgatgatggcccctccaacgcagtgattcttcac
gaagacaagcagtactacccgaccgccgagcaggtgtatggccaagatgtcgagactcgt
gtcgaggaggaggatgcgcagcctctcacccagcccatcatcgcgccgattgagacgaaa
aagttcacaattgaagaggaggatctcccgcccgtgtactacagccgcgagttcatgacg
gacttgatgaactttcccgaccaaatacgaaacgtcgccctcgctggccatctgcaccac
ggaaagaccgcctttaccgatatgcttgttctggaaacacacgacatcctcgagaagttg
gacaagagagtgggccgaaagcgtgacgaggcgctccgatacacagacattcacatcctc
gagcgcgaacgtggcgtctctctcaaatcctcacccatgagctttgtgctgcctaattcc
aagggcaagtcacatctggtcaatgtcatcgacactcccggccatgtcaactttgtggac
gaagtcgctgctgcgttccgactggtcgacggtgtctgcttggtcgtcgacgtggtggag
ggtgtgcagatcaatacagaacagattatcaagcacgccgttctgcaggacctgccgctg
acgctgattgtcaacaagatggaccgcctcatcgtcgagctgagactgccgcccaaggac
gcatactttaagctcaagcacgtcatcgaggaagtcaacaccataatcacaaacactgcc
cccgccgcctccgcggcaaagcgcatcagccccgaaaagggaaatgtgctttttgcttgc
acggatatgggctggtgctttacgttacagtcatttgccaaaatgtacgccgacacctac
ggcgacgtcagcgccgaggacttggccaagcgtctctggggagacgtctacttcaacccc
aggaaacgaaccttttcgcggaaaccactcgaggatagaacctcgagatcattcgtacac
tttgtcctggaacccatttacaaaatcttcacacattccatcagcgacagcccagaggat
ttgcgccctgtcctagagtctctcggcattcagctgaaacccgcacaatacaaggctgat
gccaaggtcattctcaggcttgtgtgcgagcagttcttcgggccctctactggcttcgtc
gatatgcttgttcagcatgtgccttcgccagtcgagtcagtgcaacgattactggagcgc
cactacactggccccctggatagcaaggttgccggctccatgctgcaatgcaaccaagat
ggaccgcttgtcgttcacatcgctaagcttttcaacaaacccgacgccaagagtttctat
tcattcggccgagttttgagcggaaccgcgcgtcccggcatgcaggtccgagtgctggga
gaagggtactcgctagacgacgaggaagatatgacgatgacgacgataaaccaagtcttt
attggtgagacgagatataacattcccaccgatggcgtgccagccggcaacctcgtgttg
ctggacggagtcgacaactcaatagtcaagacagccacgattgtcgcacctaagctggag
gatgacgaggatgcgtacattttcaaacctatcaaccactttacagaatccgttctcaag
gtcgccgtggagccgatcaacccgtcggagctgcccaagatgcttgacggcttacgaaaa
atccaaaagtcatatcctcttctcaacaccaaggtcgaggagtctggcgagcacattatc
atcggcactggcgagctttatatggactgcgttctgcacgacttgcgtcgtctatacgca
gacatggacatcaaggtgtcggatcctgtcacgagattctgcgagacggtagtggaaacg
tcggccaccaagtgctacgccattacaccgaacaagaagaacaagatcactatggttgcc
gagcagctggagaagggtatctcaaccgacattgagacgggagccgtcaagatccgcgat
cccatcaagaagacggccaagttctttgaggagaaccacggctgggacaagctggcggcg
cgaagcatctgggcgtttggccctgacgaggctggccccaacattctccaagacgacacg
ctacccaccgaggtcgacaagaagctcctcaacacggtccgcgagtcgatccgccagggc
ttcagctgggcgacgcgtgagggcccgctgtgcgaggagccgatccgcaacacaaagttc
aaggtgacggacattgtgctcgccggcgaggccatcttccgcggtggcggccagatcatc
ccgacgtcgcgccgcgcgtgctactcgtcgttcctcatggcctcgccgcggctcatggag
cccgtgtacgccgtgtccgtcacggggcccgaggattcgtacatggaggtgtacaacgtg
ctcgcgcgccgccgcgggcacgtgctctcggacgggcccgtcaccggcacgccgctgtac
cgcgtcaacggcctgctgcccgtcgtcgactcgtttggcttcgaggcggacctgcgcatc
aagacgcagggcagctccatggtctcgctcgtctttgactcgtggagcatcgtccccggc
gacccgctcgaccgcgagcaggtcatccgcccgctccagcccgcggctgtgcaggccacg
gcgcgcgactttgtcctcaagacgaggcgccgcaagggtcttagcgaggacgtcagcgtc
aagacgttcctggagccggaattctaccagagcctgatggagagcggcatgcttggcgag
ctgtag
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