KEGG   Akanthomyces muscarius: LMH87_010666
Entry
LMH87_010666      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
amus  Akanthomyces muscarius
Pathway
amus03018  RNA degradation
amus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LMH87_010666
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMH87_010666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amus03019]
    LMH87_010666
   03041 Spliceosome [BR:amus03041]
    LMH87_010666
Messenger RNA biogenesis [BR:amus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LMH87_010666
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LMH87_010666
Spliceosome [BR:amus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LMH87_010666
 Complex C
  U2 snRNP components
    LMH87_010666
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 80897825
NCBI-ProteinID: XP_056051604
LinkDB
Position
4
AA seq 96 aa
MADEADGSSHVAEPLDLVRLLLNEVVFVKLRGDRELKGKLHAYDSHCNLVLGEVEETIYG
VDEEDDEEEAKTISRKSEMLFVRGDSVVLISPQVPF
NT seq 291 nt   +upstreamnt  +downstreamnt
atggccgatgaagcggacggatcaagtcatgtcgcggagcctttggaccttgtgcgcctg
ctcctcaacgaagtcgtgtttgtcaagcttcgaggcgacagagagctcaagggcaagctg
catgcctacgatagccactgcaacctggtgctgggtgaggtagaggagaccatttacggc
gttgatgaggaggatgatgaagaagaggccaagaccatcagccgcaagtcggagatgctc
tttgttagaggtgacagcgttgtcttgatctccccccaagttccgttttga

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