Amycolatopsis sp. EV170708-02-1: MJQ72_44415
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Entry
MJQ72_44415 CDS
T10873
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJQ72_44415 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_44415 (nth)
Enzymes [BR:
amye01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MJQ72_44415 (nth)
DNA repair and recombination proteins [BR:
amye03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MJQ72_44415 (nth)
Prokaryotic type
MJQ72_44415 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UMP03279
LinkDB
All DBs
Position
9632457..9633140
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AA seq
227 aa
AA seq
DB search
MKRCLDDEFPDAHCELDFTTPLELLVAVVLSAQTTDVRVNQVTPALFARYRTAADYAGAD
RAELEEYLRPTGFFRAKANSVLGLGAALVERYDGEVPGKLKDLVTLPGVGRKTANVVLGD
AFGVPGITVDTHFGRLVRRWGWTEEEDPVKVEHAVGELIPRKEWTLLSHRTIFHGRRVCH
ARKPACGACPLAKMCPSYGTGPTGFEEAAKLVKGEEREHILELAARR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttgcctcgacgacgagttccccgacgcgcactgtgagctcgacttcaccact
ccgctcgaactgctggtcgcggtcgtgctctcggcacagaccaccgacgtccgcgtgaat
caggtcacgcccgcgctcttcgcgcgctaccggaccgcggcggactacgccggcgccgac
cgcgccgaactcgaggagtacctccgaccgacgggcttcttccgcgccaaggcgaactcg
gtgctggggctgggcgccgcgctggtggagcgctacgacggcgaagtgcccggcaagctg
aaggacctcgtcacgctgccgggggtcggccgtaagacggccaacgtcgtgctcggggac
gccttcggggtccccgggatcaccgtcgacacccatttcggccgcctggtccgccgctgg
ggctggaccgaggaggaggacccggtcaaggtcgagcacgccgtcggcgagctgatcccg
cgcaaggagtggacgctcctctcgcatcggacgatcttccacggacgccgcgtctgccac
gcccgcaaaccggcctgcggcgcctgcccgctggcgaagatgtgcccctcgtacggaacc
ggcccgacgggcttcgaagaggccgcgaagctcgtcaagggcgaagagcgcgagcacatc
ctggaactggcggcccgccggtga
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