Amylibacter sp. IMCC11727: QBD29_04615
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Entry
QBD29_04615 CDS
T08989
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QBD29_04615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_04615 (nth)
Enzymes [BR:
amyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QBD29_04615 (nth)
DNA repair and recombination proteins [BR:
amyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QBD29_04615 (nth)
Prokaryotic type
QBD29_04615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WGI22705
LinkDB
All DBs
Position
900840..901487
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AA seq
215 aa
AA seq
DB search
MTKQLDYHTIHAMFSRFRDSEPEPKGELDHVNAYTLVVAVALSAQATDVGVNKATKELFK
IADTPEKMLALGLDGVTEHIKTIGLYRNKAKNVMKMSQILVDEYNSVVPSSRAALESLPG
VGRKTANVVLNMWFKQPTQAVDTHIFRFGNRTGVCPGKDVVVVERAIEDHIPAEFAMHAH
HWMILHGRYVCKARKPVCGNCIVEDLCPFEEKNFG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaactcgattaccacacgatccacgcgatgttttcgcggtttcgggacagt
gagccagagcccaaaggggagctggatcatgtgaatgcctataccctcgtggtggcggtg
gcgttgtcggcgcaggcgacggatgtgggggtgaataaggcgacgaaggagctgttcaag
attgcggatacgcctgagaagatgctcgcacttggccttgatggggtgacggagcatatt
aagacgattgggctttatcgcaacaaagccaagaacgtcatgaagatgtcccagatattg
gtggatgagtataacagcgttgtgccgtcctcgcgcgcggcgttggagagcctgccaggg
gtcgggcgtaagacggcgaatgtggttttgaacatgtggttcaagcagccaacacaggcg
gtggacacgcatatttttcggtttgggaataggactggggtatgccctggtaaggatgtc
gtggttgtagaacgggcgatagaggatcatatccccgccgaatttgccatgcacgcgcat
cattggatgattttacacgggcgttatgtgtgcaaagcgcgtaaacccgtctgcggaaac
tgtatcgttgaggacttatgtccgtttgaggagaagaattttggctaa
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