Amycolatopsis sp. TNS106: CVV72_31500
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Entry
CVV72_31500 CDS
T10876
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVV72_31500 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_31500 (nth)
Enzymes [BR:
amys01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CVV72_31500 (nth)
DNA repair and recombination proteins [BR:
amys03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVV72_31500 (nth)
Prokaryotic type
CVV72_31500 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QXV61078
LinkDB
All DBs
Position
6870926..6871609
Genome browser
AA seq
227 aa
AA seq
DB search
MKRCLDDEFPDAHCELDFTTPLELLVAVVLSAQTTDVRVNQVTPALFARYRTAADYAGAD
RAELEEYLRPTGFFRAKANSVMGLGAALVERYDGEVPGKLKDLVTLPGVGRKTANVVLGD
AFGVPGITVDTHFGRLVRRWGWTEEEDPVKVEHAVGELIPRKEWTLLSHRTIFHGRRVCH
ARKPACGACPLAKMCPSYGIGPTGFEEAAKLVKGEERDHILELAARR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttgcctcgacgacgagttcccggacgcgcactgtgagcttgacttcaccact
ccgctcgaattgctggtcgcggtcgtgctttcggcgcagaccaccgacgtccgcgtgaat
caggtcacgcccgcgctcttcgcccgctatcggacggccgccgattacgccggcgccgac
cgcgccgaactcgaggagtacctccgtccgacggggttcttccgcgccaaggcgaactcg
gtgatggggctgggcgccgccctggtcgagcgctacgacggcgaagtgcccggcaagctc
aaagacctcgtcacgctgccgggtgtcggccgcaagaccgccaacgtcgtgctcggcgac
gccttcggggttcccgggatcaccgtcgacacgcacttcggccgtctcgtccgccgctgg
ggctggaccgaggaggaggacccggtcaaggtcgagcacgccgtcggcgagctgatcccg
cgcaaggagtggacgctcctctcgcaccggacgatcttccacggccgtcgcgtgtgccac
gcccgtaaacccgcctgtggcgcctgcccgctggcgaagatgtgcccctcgtacggaatc
ggcccgacgggcttcgaagaggccgcgaagctggtcaagggcgaagaacgcgaccacatc
ctggaactggcggcccgccggtga
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integrated database retrieval system
