Ancylobacter sp. TS-1: GBB76_09565 Help Entry GBB76_09565       CDS       T06239                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism anc  Ancylobacter sp. TS-1 Pathway anc03030   DNA replication anc03410   Base excision repair anc03420   Nucleotide excision repair anc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:anc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GBB76_09565 (ligA)    03410 Base excision repair     GBB76_09565 (ligA)    03420 Nucleotide excision repair     GBB76_09565 (ligA)    03430 Mismatch repair     GBB76_09565 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:anc03032]     GBB76_09565 (ligA)    03400 DNA repair and recombination proteins [BR:anc03400]     GBB76_09565 (ligA) Enzymes [BR:anc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GBB76_09565 (ligA) DNA replication proteins [BR:anc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GBB76_09565 (ligA) DNA repair and recombination proteins [BR:anc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GBB76_09565 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      GBB76_09565 (ligA)    MMR (mismatch excision repair)     DNA ligase      GBB76_09565 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GBB76_09565 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia Zn_ribbon_NUD HHH Bep_C_terminal HALZ Motif Other DBs NCBI-ProteinID:  QFR33364 UniProt:  A0A5P8MZF1 LinkDB All DBs Position complement(1998540..2000741) Genome browser AA seq 733 aa AA seqDB search MTNSANSPAPGSQAPAAVETLTADEAAGEHARLGDAIAHADRLYYQDDAPTLTDADYDAL RRRYEAIEAQFPELKGIDSLSERVGAAPSAKFAKVRHAVPMLSLGNAFEDGDVEEFVARV RRFLGLGPETEIAFTAEPKIDGLSCNLRYENGVFVQAATRGDGFEGEDVTNNVRTIGEIP ARLTGDDVPDVFEVRGEVYMGHADFAAINERQQAAGKPLFANPRNAAAGSLRQLDPRITA SRPLRFFAYAWGEVSGSALPADTQFGVIEAFSRWGLPTNPLTVRCTSAEELLAHYHRIGE GRASLGYDIDGVVYKVDSLALQQRLGFVSRSPRWALAHKFPAQRAATQLQAIDIQVGRTG ALTPVAKLAPITVGGVVVSNASLHNEDYIRGIGGDGAPIRGEVDGAPVDIRVGDWVEVQR AGDVIPQVVSVDLARRPPEAVRYEFPTICPACGSHAVREEGESVRRCTGGLICPAQAVER IRHFVSRDAFDIEGLGEKQVQAFFEWGLVKQPADIFTLEARDSDPTALTRLKNRDGWGET SAKNLFAAIEARRRVPVNRLLYGLGIRHVGETNAKRLLRHFAGIEALREVALAAVPPGEA HPKGNEAWQELVGIEGIGAVVAEAVVDFFTEPNNEAALAALMREVSPEPMETVAASGAVA GKTVVFTGALEKMTRDEAKAMAERLGAKVAGSVSKKTDYVVAGADAGSKLAKARELGVPV LTEDEWLALAGGG NT seq 2202 nt NT seq  +upstreamnt  +downstreamnt atgacgaacagcgccaattcccccgccccgggttcgcaggcgcccgccgccgtcgagacg ctgaccgccgacgaggccgccggcgagcatgcccggctcggcgacgccatcgcccatgcc gaccggctctattaccaggacgacgcgccgacgctgaccgacgcggactatgatgcgctg cgccggcgctacgaggcgatcgaggcgcagtttcccgagttgaagggcatcgacagcctc tccgagagggtgggcgcggcgccgtcggcgaagttcgccaaggtccgccatgccgtgccg atgctctcgctcggcaacgccttcgaggacggcgatgtcgaggagttcgtggcccgcgtg cgccgcttcctcggccttggccccgagacggagatcgccttcaccgccgaaccgaagatc gacggcctgtcctgcaacctgcgctatgagaacggtgtgttcgtgcaggcggcgacgcgc ggcgacggcttcgagggcgaggacgtcaccaataatgtgcgcaccatcggcgaaattccc gcgcggctgacgggcgacgacgtgcctgacgtgttcgaggtgcgcggcgaggtctatatg ggccacgccgatttcgccgccatcaacgagcgccagcaggcggcgggaaagccgctcttc gccaatccgcgcaacgcggcggccggcagcctgcgccagctcgaccccaggatcaccgcc agccgtccgctgcgcttcttcgcctatgcctggggcgaggtgagtgggagcgcgctgccg gccgacacccagttcggcgtgatcgaggcgttcagtcgctggggcctgccgaccaatccg ctgaccgtgcgctgcacctctgcggaggaactgctggcgcattatcaccgcatcggcgag gggcgggccagcctcggctacgacattgacggcgtggtctacaaggtcgacagcctcgcc ctgcagcagcggctcggcttcgtctcgcgctcgccgcgctgggcgctggcgcacaaattc ccggcgcagcgcgcggcgacgcagcttcaggccatcgacattcaggtcgggcgcaccggc gcgctgaccccggtcgccaagctggcgccgatcacggtcggcggcgtggtggtgtcgaac gcctcgctgcacaatgaggactatattcgcggcattggcggcgacggtgcgccgatccgc ggcgaggtcgacggcgcgccggtcgacatccgcgtcggcgactgggtggaggtgcagcgc gccggcgacgtcatcccgcaggtcgtgtcggtcgacctcgcgcgccgtccgcccgaggcg gtgcgctacgagttccccactatttgcccggcctgcggctcgcatgccgtgcgcgaggag ggcgaatcggtgcgccgctgcaccggcggcctgatctgcccggcgcaggcggtggagcgc atccgccacttcgtctcgcgcgacgccttcgacatagaagggctgggcgagaagcaggtg caggccttcttcgaatgggggctggtgaagcagccggccgacatcttcacgctggaggcg cgcgattccgaccccacggcgctgacgcggctgaagaaccgcgacggctggggcgagacc tcggccaagaatctcttcgcggccatcgaggcgcgccggcgcgtgccggtgaaccggctg ctgtacgggctgggcatccgccatgtcggcgagaccaacgccaagcggctgctgcgccac ttcgccggcatcgaggcgctgcgcgaggtggctctggccgccgtgccgccgggcgaagcg cacccgaagggcaacgaggcgtggcaggaactcgtcggcatcgagggcatcggcgcggtg gtggccgaggcggtggtcgacttcttcaccgagccgaacaacgaggcggcgctcgccgcg ctgatgcgggaggtgagccccgagccgatggagaccgtcgccgcctccggcgcggttgcc ggcaagacggtggtgttcaccggcgcgctggagaagatgacccgcgacgaggccaaggcg atggccgagcggctgggcgccaaggtggcgggctcggtgtcgaagaagaccgattacgtg gtggccggcgccgatgccggctccaagctcgccaaggcgcgcgaactcggcgtgccggtg ctgaccgaggacgaatggctggcgctggccggcggcggttga

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