Aneurinibacillus sp. Ricciae_BoGa-3: PP175_26530
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Entry
PP175_26530 CDS
T10201
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aneu Aneurinibacillus sp. Ricciae_BoGa-3
Pathway
aneu03030
DNA replication
aneu03410
Base excision repair
aneu03420
Nucleotide excision repair
aneu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aneu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP175_26530 (ligA)
03410 Base excision repair
PP175_26530 (ligA)
03420 Nucleotide excision repair
PP175_26530 (ligA)
03430 Mismatch repair
PP175_26530 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aneu03032
]
PP175_26530 (ligA)
03400 DNA repair and recombination proteins [BR:
aneu03400
]
PP175_26530 (ligA)
Enzymes [BR:
aneu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PP175_26530 (ligA)
DNA replication proteins [BR:
aneu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PP175_26530 (ligA)
DNA repair and recombination proteins [BR:
aneu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PP175_26530 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP175_26530 (ligA)
MMR (mismatch excision repair)
DNA ligase
PP175_26530 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PP175_26530 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
HHH_5
PTCB-BRCT
BRCT_2
DNA_ligase_ZBD
EAD10
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
WCK57622
LinkDB
All DBs
Position
unnamed:196264..198021
Genome browser
AA seq
585 aa
AA seq
DB search
MKFSKKANSRIIAQQKLDGLTIVLTYDNGDLQLAVTRGNGYIGQAVTHNVRTFKDVPKHI
LFQGKLEVRMEAVIPFVEFQRINVNGEYANARNLASGTMSQLDANIAKDRNMMGIVFDLV
SAEGVEFSTDVEMLEFLKTQGFHVVPYEVFDNTEEGITALVDYCLTYHKTIRKTLPYQID
GLVLKFDDLEIREELGYTAKFPRWGCAFKFESEDATTTLNKVVEQVGKSGQITPVAEFDT
VEIDGVKISRATLHNYGNVSDKEYYVGGKLRKGKDIRIGDRIVVTRANDVIPQVVQSIKD
VRTGNEQIIEAPTHCPACGSPTEWDGENLFCTGLDCRPQLEGKLEHFVSRKTLNIDGLGD
KTIKLLLEKGFISSVTDIYKLHENEAEITTMDGFGKKKYDKMIEGIEASKKNPLHRVLYA
LSIRHIGESSSKDVSKSFKNMDEIIELSKDVDAFRAKLLTINDFGSTMTESMVDFFTNVK
NIEAIRELQAVGFTMESEYQGQAPAGTSLEGKTFVITGKLSKGRDEFKSLIESLGGKVSG
SVSKKTTYLLMGDGEEGSSKHQKALELAEFVTILNEEAFNKLIEA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcagcaaaaaagccaacagccgtattatcgctcaacaaaaactggatggactt
accattgttcttacctacgataatggagacttacagttagccgtgacgagaggcaatggg
tatattggccaggcggttacacacaacgttcgcacgttcaaagatgtacccaaacacatt
cttttccaaggaaaattggaagtacgcatggaagcagtcattcctttcgtggaattccaa
cgaattaatgtcaatggggaatatgctaatgctcgtaacttggcttctggaacgatgtct
caactggatgctaacattgccaaagaccgaaacatgatgggaattgtgtttgatttggta
tctgcagaaggtgtagaattctctaccgatgtagaaatgttagagttcttaaaaactcaa
ggattccatgtggttccatatgaggtctttgacaacactgaagaaggcataacggctttg
gtagactactgtctcacctatcataagacgattcgaaaaaccctaccctatcagattgat
ggattggttcttaaatttgacgatttggagattcgtgaggagttaggttacaccgctaaa
tttccacgttggggctgtgcctttaagtttgaatcggaagatgcgacaaccacactaaat
aaggttgtagagcaggttggaaaaagtggacaaattacgcctgttgctgaatttgatacc
gtggaaattgatggggttaaaatcagtcgtgcaacccttcataattacggaaatgtatcg
gacaaagaatactatgttggtgggaagttacgtaaaggaaaagacattcgtattggagac
cgtattgttgtcaccagagcaaatgatgtcattccgcaagtggttcaaagtattaaggat
gttcgtactggaaatgaacaaattattgaagctcctacccactgccctgcatgtggttcc
cctactgaatgggatggagaaaacctattctgtacaggactcgattgcagaccgcaatta
gaaggtaagcttgaacatttcgtcagtcgaaaaacacttaatattgatggattaggcgat
aaaaccatcaaactactgttggaaaaaggatttatctcttccgtcacggatatttataag
ctccatgaaaatgaagcggaaatcaccacaatggatgggttcggtaagaagaaatatgat
aaaatgatagagggaattgaagcatcgaagaaaaatcctctccatcgtgtgctatatgct
ttgtctattcgtcatattggtgaatcatcatcaaaagatgtatctaaatccttcaagaac
atggatgaaatcattgagctttccaaggatgttgatgcgttccgtgccaaactccttacc
attaatgattttggaagcaccatgaccgaaagtatggttgacttctttaccaacgtgaag
aacattgaagcgattcgtgaacttcaagccgttggatttacaatggaaagtgagtatcag
ggacaagctcctgcaggaacctctctagaagggaaaaccttcgtaattacagggaaactt
tccaaaggtagagatgaattcaaatcactaattgaatctttaggtggcaaagtaagtggt
tcggttagcaagaaaaccacttatctcttgatgggtgatggtgaagaaggttcttccaaa
caccagaaagccttggaattagccgaattcgtcaccatccttaacgaggaagctttcaat
aaactaattgaggcgtaa
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