KEGG   Athene noctua (little owl): 141957516
Entry
141957516         CDS       T11550                                 
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
anoc  Athene noctua (little owl)
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:anoc03036]
    141957516 (SMCHD1)
   03400 DNA repair and recombination proteins [BR:anoc03400]
    141957516 (SMCHD1)
Chromosome and associated proteins [BR:anoc03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    141957516 (SMCHD1)
DNA repair and recombination proteins [BR:anoc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     141957516 (SMCHD1)
SSDB
Other DBs
NCBI-GeneID: 141957516
NCBI-ProteinID: XP_074755229
LinkDB
Position
2:join(53962630..53962809,53974344..53974419,53974569..53974730,53983754..53983836,53983942..53984072,53985772..53985886,53986023..53986142,53989042..53989208,53991426..53991519,53991773..53991983,53992839..53992959,53993062..53993245,53993735..53993932,53994065..53994178,53994629..53994735,53995000..53995082,53995235..53995348,54000135..54000212,54000295..54000414,54006668..54006812,54007048..54007144,54011752..54011824,54013384..54013523,54015110..54015244,54016083..54016310,54017019..54017167,54018603..54018691,54019840..54019958,54020656..54020823,54022024..54022149,54025523..54025602,54027117..54027274,54030571..54030686,54031143..54031204,54034127..54034214,54034550..54034681,54035817..54035966,54039349..54039475,54039646..54039765,54041199..54041284,54042346..54042468,54042735..54042925,54043680..54043789,54045032..54045102,54046724..54046895,54048750..54048908,54049597..54049714,54050686..54050794)
AA seq 2032 aa
MAAAAGGSRGGRRPVLLTPRGSGDRTVFLFDRRQEQADPDEKVLSYGKDNYRGFRSAVCQ
AFGIATDENFVITTTNRKEITEDNFRELVQDGVTLYLLQSVDQTLLSATKERIDFLPHYD
TLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGIRSIQIKLLFDDSHGKPAVAV
IDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPLPVPRSLNSDISYFGVGGKQA
VFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSTHIASDD
ERFLHNLILEERDKESFTAVVITGVQPDHMQYLKNYFHLWTRQLAHIYHYYVHGPKGNEA
NAVTKDVSPFNNIDIQISMFEKGKVPKIVSLREIKDDMQTLYINTAADSFEFKAHVEGEG
IVEGIIRYHPFLYDRETYPDDPCFPSKLNDDDDDDDCFIVEKGARGKRPIFECFWNGRLI
PYTTVEDFDWCAPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTL
FTRIFNGQEQRMKIDREFALWLKDCHEKYDKQIKFTVYKGVTTRTDLPSKRMQSPWTMYA
AIEWDGKTYRTGQLVKTVKTLPIFYGSIEKFFLYGDHDGDIFATGGEVQIALEPQALYAE
TKTVPISKLDRTVSDKAIKKYIEDEMARLPDKLSVTWPEGDELLPNETRFAGTPIGALRI
EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSPTGNKEIISHISQHGGKWPYWFKKME
NLQKLGNYTLKLQVVLNESNADTYAGRPLPSKIFKFTIIEGKPEKFSIGVLELPFRVGVP
FNIPLELQDEFGHATQLRTDIKPILEASGLTLQYEEITAEAKCIIKGVTAKGSINSCQGK
NFNLKVTLPGLKEDTQIFKIRLQPGPPRQLKVKPDSDILKIENGTAFPFQVEVLDESGNI
TAQPKLIVHCKFLGASNLPVYSVDCSNAGTNILTGPVIHVQNIKKDQILKARIEILSCKD
VPPVEKIIKLLPSSHVARLQVLSVDGQKAIQIKHQDEINWVAGDIMHNLIFQMYDEGERE
IHVTPAVAEKIKVNWTPRINREQLIQGLLPDVKVPTSVKDIRYCLITYLDDHVSLESAFT
VRPLPDEPKHIKCKLKGPNTLQVGEELQSEIDVMITDQYGNQVQTVTSACVNSLGVSGPG
LDKSNLKITWQESTLTMRVKGIRFKPCLLGSKELCFAWREFSDFLRVNLTAGSPAKLQFV
DWPELERPVAVINGRELQKPLIVQLCDQWGNPSPEPNVKISLTKSNNLKIVPSNQLHKTD
ENGRANLGIISIHAPRGEHALQLKASHGKTTLDCPIITFNVLPDPEKPVCLNVKYDKTVS
FPAGGTFPDFMVSVLSEDDNIIKNINPARISMKMWEAQSSGTRTPIDVTTFSCSKVKDDK
EDGFFYFRDKVVPERVGTYSIQFTFAMDKTNMLSSDQIIAEVVPNDPVRLLPDSLPATPA
VSNVRTLTSRTLVKDLHLHVMDQYNNHTGIDLVGRIIAKIKSPSEDDIEIPQFQGKVSTV
EFPFDRGSAVINLVLAENSPGRDSTEYILVFEPDLPALKKPLEPYCLSFMFYNDFKKQQQ
MATLTRERDQLSQSIGVYRNWFDTTNQLVTEMKCQVKEAETRETHLKNELKKHLIELPQT
NTLQYVDSLIKQKMLDQEGVMKQPRRTCTLPNYPKGNQDILGKIAHLAQIEDNEAAKVIS
WHLASDMDCVVTLTTEAARSIFDETQGRQQVLPLDSIYKKTLPDWNRPLPHLRNGKIFFR
PIGNPVFARDLLTFPDNVEHCQTVFGMLLGDTIIIDNLDAANHYRKEVVKITHCPTLLTR
EGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPMPKLYSTLSGQIDLLQQYRAAVVKLDKV
NKDLGVHLQSLNTPEMQKKKQELAEQEKNLKLIEQKLGMTPSDKVTESLLQPILLDMSDT
PIPSKRMRRETVKKLYSSEEWISSPTKKQQQQQQLLQIPTSELNGTPRKRKA
NT seq 6099 nt   +upstreamnt  +downstreamnt
atggcagcggcggcgggaggcagccgcggaggtcgcaggccggtgctgctgacgccgcgc
ggcagcggggaccgcactgtctttctctttgaccgccgccaggagcaggcagatccggac
gagaaagtgctcagctacggcaaggacaactaccgcggcttccgcagcgccgtctgccag
gcttttggcatagctactgatgaaaactttgttatcaccacaacaaacaggaaggaaatt
acagaagacaacttcagagaacttgttcaggatggagttactttgtatctgctacagtca
gttgatcagacgctgctttcagcaaccaaggagcgaattgacttcctgccccactatgac
acgcttgtcaaaagtggcatgtacgaatactatgccagcgaaggccaaaatcctttgccg
tttgcccttgctgagttgattgacaattctctgtcagctacgtcacgaaatactggtatt
cggagcatacagataaaattgttatttgatgactcccatggaaaaccagctgttgctgtg
attgataatggaagaggaatgacttctaaacaacttaacaactgggctgtatatagattg
tcaaagtttacaaggcaaggtgactttgagagtgatcattcaggatatgtacgccctttg
ccagtgcctcgtagtttaaatagtgatatctcgtattttggagttggaggcaagcaagca
gtgttcttcgttggacagtctgccagaatgataagcaaacctgcagattctcaggatgtt
catgaacttgtcctttctaaagaagattttgaaaagaaggagaaaaacaaagaagcaata
tatagcggatacattcgaaacagaaagccgtctgactctactcacatcgcaagtgatgat
gaaagatttcttcataatctaatattagaagaaagggataaagagagttttacagcagtt
gtcattacaggtgtacaaccagatcatatgcaatacttgaaaaattactttcatctttgg
acaaggcagctggcacatatctatcactattatgtccatggaccaaaaggaaatgaagct
aatgctgtaacaaaagatgtaagccctttcaacaacattgacattcagatttcaatgttc
gaaaaaggaaaagtaccaaagattgtcagtcttagggagatcaaagatgacatgcagaca
ttgtatataaatactgcagcagatagttttgagtttaaggcacatgttgaaggagaaggt
atagtggaaggcatcatccgatatcatcccttcctgtatgacagagaaacatatcctgat
gatccatgttttccatcaaaattaaacgatgatgatgatgacgacgactgctttatagta
gaaaagggtgccaggggaaaaaggcctatttttgaatgcttttggaatggaagattaata
ccgtacacaactgtggaagatttcgactggtgtgctcctccaaagaagagaggattagca
cctattgaatgctacaacagaatttctggtgcactatttaccaatgataagttccaggtc
agcacaaacaaactcaccttcatggatctggagctgaagctaaaagataagaatactctg
ttcacgagaatcttcaatggacaggagcagcgaatgaaaattgacagagaatttgctttg
tggctcaaagactgtcatgaaaaatatgacaaacagataaaattcacagtttataaagga
gtaactacacgtactgatttaccatccaaaagaatgcagagcccttggacaatgtatgct
gcaatagagtgggatgggaagacatacagaactggacagcttgtgaaaactgttaagact
cttccaatattctatggaagtattgagaaattttttttgtatggagaccatgatggagat
atatttgccacaggaggagaagttcaaattgctttggaacctcaggcattgtatgctgaa
acgaaaactgttccaatctcaaaacttgacagaacagtgtctgacaaagctattaaaaaa
tacatagaagatgaaatggcaagacttcctgacaaattatcggtaacatggcctgaagga
gatgagttattaccaaatgaaacaagatttgctggtacaccaataggagcattaagaata
gaaattttgaataaaaaaggagaagcaatgcaaaaacttccaggtacaagtcacggaggt
tcaaagaaacttcttgttgaactcaaggttattttacattcacctactgggaataaagaa
ataatttcccatatcagtcagcatggaggcaaatggccatactggtttaaaaaaatggaa
aatcttcagaaacttgggaactacaccttgaaattgcaagtagtattgaatgaaagtaat
gcagatacttatgctggaaggcctctaccatctaaaatatttaaatttactattatagag
ggcaaaccagagaaattttcaattggtgttttggagcttccttttcgagttggagtacct
tttaatattcctttggaattgcaggatgaatttggtcatgcaacacagttgagaactgac
attaaaccaattcttgaagctagtggattgacattgcagtatgaagaaataactgcggaa
gcaaagtgcatcattaagggtgtcactgctaaaggcagtataaatagctgccagggcaag
aactttaatctgaaggttacccttcccggtttgaaagaagacacacagatctttaaaata
agattgcagcctggtcctcctcgtcagttgaaagtaaaaccggattctgacattctaaag
attgaaaatggtacagctttcccctttcaggttgaagttctggatgaatcaggaaatata
acagcacagccaaagttgatagttcattgtaagtttttaggtgcttcaaaccttcctgtg
tattctgtggactgcagtaatgcaggaacaaacattttaactggtccagttatacatgtt
cagaatatcaagaaagaccagatactgaaagcaaggattgaaatacttagttgtaaagat
gtgccaccagtggaaaagattattaaacttcttcctagcagtcatgttgcaagactacag
gttttaagtgtggatggacaaaaagcgattcaaattaaacatcaggatgaaatcaattgg
gttgctggcgatatcatgcacaaccttatatttcagatgtatgatgaaggagaaagggag
atacatgtaactccagctgtggcagaaaaaatcaaggttaactggacacctagaattaac
agagaacagttgattcagggattattgcctgatgtaaaagtaccaacatcagtaaaagat
atacgttactgtctaattacttatcttgatgaccatgtgtctttggagagtgcattcaca
gtcagaccacttcctgatgaacccaaacacattaaatgtaaattaaaaggaccaaacaca
ctgcaggtgggtgaagaactacaaagtgaaattgatgtaatgattacagatcagtatgga
aatcaggttcagacagtgacatctgcctgtgtaaattccctaggagtttctgggcctgga
cttgataaatcaaatttgaaaataacttggcaggaaagtactctaacaatgagagtaaaa
ggtattcggtttaaaccttgtttacttggtagcaaagaattgtgctttgcttggcgtgaa
ttttctgacttcctcagagtaaacttaactgcgggatctcctgctaaattgcagtttgtg
gattggccagagttagaaaggcctgttgcagtgattaatggtagagaactgcagaagccc
cttattgttcagctgtgtgatcagtggggaaatccatctcctgaacctaatgtcaaaatc
agccttacaaagagtaacaacttaaagattgttccttcaaaccagctacataaaacagat
gaaaatggtagggctaacctgggaattattagtattcatgcacctaggggagagcacgct
ttacagcttaaggcctcacacggcaagaccacattagattgtcctataatcacattcaat
gtcctgcctgatcctgagaaacctgtctgcttgaatgttaaatatgacaaaactgtttct
tttccagcaggaggtaccttccctgattttatggtcagtgttctttctgaagatgacaac
attattaaaaatattaatccagcacggatttctatgaaaatgtgggaagcacagagcagc
ggaactaggacaccaatcgatgttacaacatttagctgtagtaaagtgaaggatgacaag
gaagatggcttcttctatttcagggataaagtggttccagagagagtgggcacttacagt
atccagtttacctttgcaatggataagacaaatatgctcagcagtgaccagattatagct
gaagttgtacctaatgaccctgtacgcttgttacctgattctttaccagctactccagca
gtttccaatgttcgaactcttactagccgtacactggtcaaggatttacacctccatgta
atggatcaatacaacaaccacactggaattgatctagttggcagaataatagcaaaaatt
aagagccccagtgaagatgatatagagatcccgcagtttcaggggaaagtcagtacagtt
gagtttccatttgacagaggatcagctgtaattaatctagtgctggctgaaaacagtcct
ggaagagatagcactgaatatattcttgtatttgagccagatctgccagcgttgaaaaaa
cctttggaaccatattgtttgtcatttatgttttacaatgatttcaagaagcagcaacag
atggcaacacttacaagggagagagaccaattatctcagtccataggtgtttacagaaac
tggtttgatactacaaatcagcttgtaactgaaatgaaatgtcaggttaaagaagcagaa
acaagagaaactcacctgaagaatgaactgaaaaaacacctaattgaattaccacagaca
aacacacttcagtatgtggattctcttataaaacaaaagatgttggatcaagaaggagta
atgaaacagcccaggcgaacttgtactctcccaaactatccaaaaggcaaccaggatatt
ttaggcaagattgcacatttagctcaaattgaggacaatgaagcagcaaaagtcatctct
tggcatttggcaagtgacatggactgtgtagtcacgctgactactgaagccgctcgttct
atttttgatgaaactcaaggccgacaacaagtgttaccccttgattctatttacaagaag
acactgcctgattggaacaggccattacctcacttaagaaatggaaaaatcttcttcaga
cctattggaaatcctgtgtttgccagagatctgttaacatttccagataatgtagagcat
tgtcaaacagtgtttgggatgctcttgggtgacactatcattatagataacttggatgct
gccaaccattacagaaaagaggttgtaaaaattacacattgccctactttgctgactagg
gaaggagacaggattcgcagcaatggaaaatttggaggcctccagaataaagcgcctcca
atggacaaactcagaggaatggtatttggagcacccatgccaaaactttactcgacttta
tctggacagatagatcttcttcagcagtaccgtgcagcagtagtgaaacttgataaagtg
aataaggaccttggtgtacatttgcagtcacttaacactccagaaatgcaaaagaaaaaa
caagaacttgccgaacaagagaaaaaccttaagctaatagaacaaaaattgggtatgact
ccatcagataaagtcactgagtcattacttcagcctatactgttagatatgtctgacacc
cccatcccttctaaaagaatgcgaagagaaacagtaaaaaaattgtatagctcagaagaa
tggatctcctctcccacaaagaagcaacagcagcaacagcaactgctgcaaatacccact
tcagaacttaatggaactccacgaaagagaaaggcttag

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