KEGG   Athene noctua (little owl): 141964840
Entry
141964840         CDS       T11550                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
anoc  Athene noctua (little owl)
Pathway
anoc04010  MAPK signaling pathway
anoc04020  Calcium signaling pathway
anoc04510  Focal adhesion
anoc04518  Integrin signaling
anoc04519  Cadherin signaling
anoc04540  Gap junction
anoc04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    141964840 (PDGFRB)
   04020 Calcium signaling pathway
    141964840 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    141964840 (PDGFRB)
   04519 Cadherin signaling
    141964840 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141964840 (PDGFRB)
   04540 Gap junction
    141964840 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    141964840 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:anoc01001]
    141964840 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:anoc04090]
    141964840 (PDGFRB)
Enzymes [BR:anoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     141964840 (PDGFRB)
Protein kinases [BR:anoc01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   141964840 (PDGFRB)
CD molecules [BR:anoc04090]
 Proteins
  141964840 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 DUF3944 BACON_2
Other DBs
NCBI-GeneID: 141964840
NCBI-ProteinID: XP_074771746
LinkDB
Position
12:join(18045010..18045058,18046349..18046645,18047091..18047360,18047645..18047772,18048107..18048281,18048862..18049054,18049268..18049383,18049908..18050034,18050197..18050408,18051169..18051263,18051555..18051687,18052093..18052197,18052307..18052417,18052793..18052946,18054349..18054515,18054773..18054891,18056115..18056237,18057650..18057761,18058049..18058148,18058266..18058371,18058873..18059111,18059713..18059863)
AA seq 1093 aa
MLHPSLKTILWLLILTGMLVVTSGGSRLRIEPGDAELVLGLHSTFSLLCYGDGMLVWERE
GQPLTASLEHRDGVFVSNLTLRNVTGRHTGEYVCTYSPDQAPDTAERKALYIYVPDPSLV
FLPTITSEELFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPASYDPQQGFKGFFED
KTYFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKVVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYICNVSEGYHEKTDRKD
ITVHVIEHGFVHFHTHLPSTVYAEVHKSRTIQVEVEAYPQPNIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNESAEIDLQTNATYHT
ELQVYRVNSTLHLHRVDEPLLLRCTVKNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TIISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSFGEKARREAEVYGNTAKEDHV
QSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGMNNARLTASSPTGSILYTAVHQNGGENDYI
IPLPDPKPETICDLPQEASISRASSVLNEANTSSTISCDSPLGLRQDEEQESDPQPGCQE
PTTGHQEVEESFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgctgcacccctctctgaagacaattctctggctcctcatcctcactggtatgctggtg
gtaacatctggtggcagcaggctgcgcatcgaacctggagatgctgagcttgtcctcggc
ctccacagcaccttctccctcttgtgctatggagatggcatgctggtttgggaacgggag
ggtcagcccctcaccgcctcactggagcacagggatggtgtcttcgtcagcaatctcacc
ctcaggaatgtaacaggccgtcacactggggagtacgtgtgcacctacagccctgaccag
gctccagacacagcagagaggaaagccctgtacatctatgttccagatccctccctggtc
ttcctcccaacaatcacctctgaagagctcttcatcttcatcacgggctacacagaagct
gtcatcccatgccgtgtgacaaacccacagatgcaggtgaccctctatgagaaaaaggtg
gagaaccccatcccagcttcttatgacccacaacagggattcaaaggcttctttgaggat
aagacctatttctgtcggacgtttgtggatgaccaggaggtggattcagacaccttctac
gtctacaggatccaggtctcatctgtgaatgtctccatcagcgcagtgcagaccatagtg
cgtcagggagaaaacgttaccctgatgtgcaccgtgagcggcaatgagctagtcaacttc
aactgggattatccccgcaagcaggcagggaaggttgtggagccagtgactgacttcctg
cccggatccacccacgagatccgctccatcctcatcatccagaatgcagagctggaggac
agtgggacctacatttgcaacgtctccgagggctaccatgagaaaacggacaggaaagac
atcacagtccatgtgatcgagcatggctttgtgcacttccacacccacctgcccagcaca
gtgtatgccgaggtccacaagagccgcaccatccaggtggaggtggaggcgtacccacaa
cccaacattgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacggctctggtgctggtgcgg
gtgaagcaggaggaaggaggattttacaccatccgggcttccaatgaggatgatgaacag
gagctgtccttccatctgcagataaatgtgccagccaaagtagtggatctcaaggaaaac
agcagtgccagcagtggggagcagactgtgacatgctctgctgaaggcatgccccagcca
gagatcagctggtctacttgcagcgacatcaaatggtgcagcaccaaggggcagcccacc
cgcctgctggggaacgagtctgcagagatcgatctgcagaccaacgccacgtaccacaca
gagctgcaggtgtaccgcgtgaacagcaccctgcatctgcacagggtggacgagcccctg
ctcctgagatgcaccgtgaaaaacttcctgggcaccaactcccaggacatcactctggtc
ccacacgccttgccgttcaaggtggtcatcatctctgtcattctggccttgctggttctc
accatcatctccctgatcatcttgatcgtcctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcggtcagctctgatgggcacgagtacatctacgtggatccc
atgcagctcccttatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actcttggctctggtgcctttggacgcgtggtggaggcaacagcccatggcctgagccat
tcccaatccaccatgaaagtggcagtcaaaatgctcaaatccaccgcccggagcagtgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcactgagtactgc
cgctatggggacctggtggactacctgcaccgcaacaaacacacctttctgcagtccttc
ggtgagaaggcgcggcgagaggcagaggtgtacgggaacactgccaaggaggaccacgtg
cagagtcatctttccttgtctgttgagagcgatgggggctacatggacatgagcaaggat
gattccctggattatgtgcccatgtctgacatgaagggtgaagtcaagtatgctgacatt
gagtcttctaactacggcaccccgtacgagctggacagctattccccatcagctcctgaa
aggacagaccgggtgacgctgataaatgagtctccactcctcagctacatggacttggtg
ggattcagcttccaggtggccaatgggatggaattcttggcttccaaaaattgtgttcat
cgtgacctggctgccaggaacgtcctcatctgtgaggggaagctcgtgaagatctgtgac
tttggcctggcaagggacatcatgagggattccaactatatctccaaaggcagtacattc
ttgccccttaagtggatggctccagagagcatcttcaacaacctctacaccaccctgagc
gatgtgtggtcctttgggattcttctctgggagatattcactctaggggggactccatac
cctgagctgcctatgaacgaacagttctacaacgccatcaaacgtggctatcgaatgtcc
aaacccacccacgcctctgatgaaatctacgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacaactggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccctgct
gttgtccgcacaagacccacaatccctgggatgaacaacgccaggctcactgccagctcc
cccactggaagcatcctctacacagccgtgcaccagaacgggggtgagaatgattatatc
attcctcttcccgaccccaagcctgagacaatctgcgatctccctcaggaggcctccatc
agtcgggccagctctgtgctgaatgaggcaaacacatcatctacaatatcctgtgacagc
cctctgggcctccggcaggatgaggagcaggaatctgacccacagccaggctgccaggag
ccaaccacgggacaccaagaggtggaagagagtttcctgtag

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