KEGG   Arvicanthis niloticus (African grass rat): 117694151
Entry
117694151         CDS       T08817                                 
Symbol
Kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:anu00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    117694151 (Kdm6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:anu03036]
    117694151 (Kdm6a)
Enzymes [BR:anu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     117694151 (Kdm6a)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     117694151 (Kdm6a)
   Histone demethylases
    117694151 (Kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC TPR_1 KDM6_GATAL TPR_2 TPR_16 TPR_8 TPR_17 TPR_12 TPR_19 TPR_CcmH_CycH TPR_7 TPR_9 TPR_11 ARM_TT21_C SNAP ANAPC3
Other DBs
NCBI-GeneID: 117694151
NCBI-ProteinID: XP_034340825
LinkDB
Position
X:complement(2873207..2995110)
AA seq 1450 aa
MKSCGVSLATAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRF
HEDGARMKALLGKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYPKALSAYQRYYSL
QSDYWKNAAFLYGLGLVYFHYNAFQWAIKAFQEVLYVDPSFCRAKEIHLRLGLMFKVNTD
YESSLKHFQLALVDCNPCTLSNAEIQFHIAHLYETQRKYHSAKEAYEQLLQTENLSAQVK
ATVLQQLGWMHHTVDLLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSIGKVQD
AFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLY
ESCNQPQDAIKCYLNATRSKNCSNTSGLAARIKYLQAQLCNLPQGSLQNKTKLLPSIEEA
WSLPIPAELTSRQGAMNTAQQACKPHHPNTEPVLGLSQTPISQQSLPLHMIPPSQVDDLS
SPAKRKRTSSPTKNTSDNWSGGSAVLHPPVQQQTHSWCLTPQKLQHLEQLRANRNNLNPA
QKLMLEQLESQFVLMQQHQMRQTGVAQVRPTGIPNGPTVDSSLPTNSVSGQQPQLPLTRM
PSVSQPGVHPACPRQALANGPFSAGHVPCSPSRTLGSTDTILIGNNHVTGNGSNGNVPYL
QRNAPTLPHNRTNLTSSTEEPWKNQLSNSTQGLHKGQSSHLAGPNGERPLSSTGASQHLQ
AAGSGIQNQNGHPTLPSNSVTQGAALNHLSSHTATSGGQQGIILTKESKPSGNTLTVPET
SRQTGETPNSTASVEGLPNHVHQVMADAVCSPSHGDSKSPGLLSSDNPQLSALLMGKANN
NVGPGTCDKVNNIHPTVHTKTDNSVASSPSSAISTATPSPKSTEQTTTNSVTSLNSPHSG
LHTINGEGMEESQSPIKTDLLLVSHRPSPQIIPSMSVSIYPSSAEVLKACRLVKNGLSNS
SILLDKCPPPRPPSSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIR
GLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHTT
IAKYAQYQASSFQESLREENEKRSHHKDHSDSESTSSDNSGKRRKGPFKTIKFGTNIDLS
DDKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNN
FCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKNNLNFLMGSWWPNLEDLYEANVPVYRFI
QRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQYKLAVERYEWNKLQSVKSIVPMV
HLSWNMARNIKVSDPKLFEMIKYCLLRTLKQCQTLREALIAAGKEIIWHGRTKEEPAHYC
SICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGNLENFVVLEQYKMEDLMQVYDQFT
LAPPLPSASS
NT seq 4353 nt   +upstreamnt  +downstreamnt
atgaaatcctgcggagtgtcgctcgctaccgccgccgccgccgctttcggtgatgaggaa
aagaaaatggcggcgggaaaagcgagcggcgagagcgaggaggcgtcccccagcctgaca
gccgaggaaagggaggcgctcggcggtctggacagccgccttttcgggttcgtgaggttt
catgaagatggcgccaggatgaaggccctgctgggcaaggctgttcgctgctatgagtct
ctgatcttaaaagctgaaggaaaagtggagtctgatttcttttgtcaattaggtcacttc
aacctcttattggaagattatccaaaagcattatctgcataccagaggtactacagttta
cagtctgactactggaagaatgctgcctttttatatggtcttggtttggtctacttccat
tacaatgcatttcagtgggctataaaagcatttcaggaggtgctttatgttgatcccagc
ttttgtcgagccaaggaaattcatttacgacttgggctcatgttcaaagtgaacacagac
tatgagtctagtttaaagcattttcagttagctttggttgactgtaatccctgcaccttg
tccaatgctgaaattcagtttcacattgcccacttatatgaaacccagaggaaatatcat
tctgcaaaagaagcttatgagcaacttttgcagacagaaaacctttctgcacaagtaaaa
gcaaccgtcttacaacaattaggttggatgcaccacactgtggatcttctgggagataag
gccaccaaggaaagttatgctattcagtatctccagaagtccttggaagcagatccaaat
tctggccagtcctggtatttccttggaaggtgctattcaagtattgggaaagttcaggat
gcctttatatcttacaggcaatctattgataaatcagaagcaagtgcagatacatggtgt
tcaataggtgtgctctatcaacagcaaaatcagcctatggatgctttgcaagcttatatt
tgtgctgtacaattggaccacggccatgctgcagcctggatggatctaggcactctctat
gaatcctgcaaccagcctcaggatgctattaaatgctatttaaatgcaactagaagcaaa
aattgtagtaatacctctgggcttgcagcacgaattaagtatttacaggctcagttgtgt
aaccttccacaaggtagtctacagaataaaactaaattacttcctagtattgaggaggca
tggagcctaccaatccccgcagagcttacctccaggcagggtgccatgaacacagcacag
caggcatgtaaacctcatcatccaaatactgaacctgtattaggcctcagtcaaacacca
atttcacagcagtccttgccactacacatgattcctcctagccaagtagatgacctgtcc
agtcctgccaagaggaaaagaacatctagtccaacaaagaatacttctgataattggagt
ggtggcagtgctgtgctacatcctccagtacagcaacaaacacattcatggtgtttgaca
ccacagaaattacagcacttggaacagctccgagcaaatagaaataatttaaatccagca
cagaaactaatgttggaacagctggaaagtcagtttgtcttaatgcagcaacaccaaatg
agacaaacaggagttgcacaggtacggcctactggaattcctaatgggccaacagttgac
tcatcactgcctacaaactcagtttctggccagcagccacagcttcctctgaccagaatg
cctagtgtctctcagcctggagtccaccctgcctgtcccaggcaggctttggccaatgga
cccttttctgcaggccatgttccctgtagcccatcaagaacactgggaagtacagacact
attttgataggcaataatcatgtaacaggaaatggaagtaatggaaacgtgccttacctg
cagcgaaacgcacccactctacctcataaccgcacaaacctgaccagcagcacagaggag
ccgtggaaaaaccaactgtctaactccactcaggggcttcacaaaggtcagagttcacat
ttggcaggtcctaatggtgaacgacctctctcttccactggggcttcccagcatctccag
gcagctggctctggtattcagaatcagaatggacatcccaccctgcctagcaattcagta
acacagggggctgctctcaatcacctctcctctcacactgctacctcaggtggacaacaa
ggcattatcttaaccaaagagagcaagccttcaggaaacacattgacggtgcctgaaaca
agcaggcaaactggagagacacctaacagcactgccagtgttgagggacttcctaatcat
gtccatcaggtgatggcagatgctgtttgcagtcctagccatggagattctaagtcacca
ggtttactaagttcagacaatcctcagctctctgccttgttgatgggaaaagctaataac
aatgtgggtcctggaacctgtgacaaagtcaataacatccacccaactgtccatacaaag
actgataattctgttgcctcttcaccatcttcagccatttccacagcaacaccttctcct
aagtccactgagcagacaaccacaaacagtgttaccagccttaacagcccacacagtggg
ctgcacacaattaatggagaaggaatggaagaatcacagagccccattaaaacagatctg
cttctagttagccacagacctagccctcagatcataccatcaatgtctgtgtccatatat
cccagctcagcagaagttctgaaagcttgcaggttagtaaaaaacggcctgtctaacagt
agcattctgttggataaatgtccgcctccaagaccaccatcctcaccataccctcccttg
ccaaaggacaagttgaatccacctacacctagtatttatttggaaaataaacgtgatgct
ttctttcctccattacatcaattttgtacaaatccaaacaaccctgttacagtaatacgt
ggccttgctggagctcttaaattagacttgggacttttctctactaaaactttggtggaa
gctaacaatgaacatatggtagaagtaaggacacagttgttacaaccagcagatgaaaat
tgggaccctactggaaccaagaaaatctggcactgtgaaagtaatagatctcatactaca
attgctaaatatgcacagtaccaggcctcctcgttccaagaatcattgagagaagaaaat
gagaaaagaagtcaccataaagaccactcagacagtgaatctacatcatcagataattct
gggaaaaggagaaaaggaccctttaaaaccattaagtttgggaccaacattgacctgtct
gatgacaaaaagtggaagttacagctacatgagctgactaaacttcctgccttcgttcga
gttgtatcagcagggaatcttctaagccacgttggtcatactatactgggcatgaacaca
gttcaactatacatgaaagttccaggaagcagaacaccaggtcatcaagaaaataacaac
ttctgttcagttaatataaatattggcccaggtgactgtgaatggtttgttgttcctgaa
ggctactggggtgttctgaatgacttctgtgaaaaaaataatttgaatttcttaatgggt
tcttggtggcccaaccttgaagatctttatgaagcaaatgttccagtgtataggtttatt
cagcgacctggagatctggtctggataaatgcaggcactgttcattgggttcaagctatt
ggctggtgcaacaacattgcttggaatgttggtccacttacagcctgtcagtataagtta
gcagtggaacggtacgaatggaacaaattgcaaagtgtaaagtcaatagtacctatggtt
catctttcctggaatatggcacgaaatatcaaggtttcagatccaaagctttttgaaatg
attaagtattgtcttctgagaacgctgaagcaatgtcagacattgagggaagctctaatt
gctgcaggaaaagagatcatatggcacgggcgtacaaaagaagaaccagctcattattgt
agcatttgtgaggtggaggtttttgatctgctttttgtcactaatgaaagtaattctcga
aagacatacattgtacattgccaagattgtgcacgaaaaacaagtgggaatctggaaaat
tttgtggtgctagaacagtacaaaatggaggatctgatgcaagtctatgaccaatttaca
ttagctcctccattaccatccgcctcatcttga

DBGET integrated database retrieval system