Arvicanthis niloticus (African grass rat): 117696384
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Entry
117696384 CDS
T08817
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01524
Platinum drug resistance
anu04115
p53 signaling pathway
anu04210
Apoptosis
anu04215
Apoptosis - multiple species
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05134
Legionellosis
anu05152
Tuberculosis
anu05160
Hepatitis C
anu05161
Hepatitis B
anu05162
Measles
anu05164
Influenza A
anu05168
Herpes simplex virus 1 infection
anu05169
Epstein-Barr virus infection
anu05200
Pathways in cancer
anu05222
Small cell lung cancer
anu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117696384 (Apaf1)
04215 Apoptosis - multiple species
117696384 (Apaf1)
04115 p53 signaling pathway
117696384 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117696384 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
117696384 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
117696384 (Apaf1)
05160 Hepatitis C
117696384 (Apaf1)
05164 Influenza A
117696384 (Apaf1)
05162 Measles
117696384 (Apaf1)
05168 Herpes simplex virus 1 infection
117696384 (Apaf1)
05169 Epstein-Barr virus infection
117696384 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
117696384 (Apaf1)
05152 Tuberculosis
117696384 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
117696384 (Apaf1)
05012 Parkinson disease
117696384 (Apaf1)
05014 Amyotrophic lateral sclerosis
117696384 (Apaf1)
05016 Huntington disease
117696384 (Apaf1)
05020 Prion disease
117696384 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
117696384 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117696384 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
117696384 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_Prp19
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
NB-ARC
WHD_APAF1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_like
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
eIF2A
Beta-prop_VPS8
Beta-prop_WDR11_2nd
Beta-prop_SPT8
Ge1_WD40
Beta-prop_ACSF4
CARD_2
Beta-prop_Nup120_160
KNTC1_N
AAA_16
Beta-prop_IFT140_2nd
Utp8_b_propeller
Beta-prop_RSE1_2nd
WDR54
Beta-prop_IP5PC_F
NPHP3_N
AAA_22
ATPase_2
AAA_18
nSTAND6
NACHT
Motif
Other DBs
NCBI-GeneID:
117696384
NCBI-ProteinID:
XP_034343127
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMI
LNKDNCAYISFYNALLHEGYKDLAGLLHSGLPLVSSSSGKDTDGGITSFVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSG
GVHWVSIGKQDKSGLLMKLQNLCTRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKHVVPVESGLGKEKGLEILSLFVN
MKKEDLPVEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYYQPHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDTGRLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV
LCCAFSSDDSYIATCSVDRKVKVWDSATGKLVHTYDEHSEQVNCCHFTNKNNHLLATGSN
DCFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDELLASCSADGTLKLWDVRSANERKSI
NVKRFFLSSEDPPEDVEVMVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS
TIQYCDFSPCDHLAVIALSQFCVELWNIDSRIKVADCRGHLSWVHGVMFSPDGSSFLTAS
DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGNTGQTDYLPE
AQASCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISS
SEDSVIQVWNWQTEDYVFLQAHQETVKDFRLLKDSRLLSWSFDGTVKVWNVITGRIERDF
TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFERLSPLHELTGHNGCVRCSAFSMDGIL
LATGDDNGEIRIWNVSDGQLLHLCAPISVEEGTATHGGWVTDVCFSPDSKMLVSAGGYLK
WWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagcccgcaattgtttgcttcaacatagagaagctctggaaaaggacatc
aaaacctcctacatcatggatcacatgatcagtaacggcgtcttaactgtcgtagaggaa
gaaaaggtcaaaagtcaggccactcaatatcaacgagctgctgctttaattaaaatgata
cttaataaagacaactgcgcctacatttcattctacaacgccctactacatgagggctac
aaagacctcgctgggcttctgcatagcggtcttcctcttgtgtcctcttccagtggcaag
gacacagacggtggaataacttcctttgtaaggaccgtgctgtgtgaaggtggagtacca
cagaggccagttgtttttgttactagaaagaagctggtcaatgcgattcagcagaagctc
tggaaattgaatggagagccagggtgggtcaccatatatggaatggcaggctgtggcaag
tctgtattagctgcagaagctgttcgagatcattcgctcttagaaggttgtttttcaggg
ggtgtacactgggtttccattggaaaacaagacaaatctgggcttctaatgaaactgcag
aatctttgcacgaggttggatcaagaagagagtttctctcagaggcttccacttaatatt
gaggaggccaaagaccgtctccgggttctgatgctgcgcaaacatccaaggtctctgctg
atcttggatgatgtttgggatccatgggtgttaaaagcttttgacaatcagtgtcagatt
cttcttacaaccagagataagagtgttacagattcagtaatgggtcctaagcatgttgtc
cctgtggagagtggtctagggaaagagaagggacttgagatcttgtcactttttgttaac
atgaagaaagaagacttgccagtggaggctcacagtattataaaggaatgcaaaggttct
cctctcgtagtgtctttaattggtgcgcttttacgtgattttcccaatcgctgggcatac
tacctcagacagcttcagaataagcagtttaagagaataaggaaatcttcatcttatgat
tatgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gactattacacagatctttccatccttcagaaggatgtcaaggtacctacaaaggtgcta
tgtgttctctgggacttggagactgaagaagttgaagacattctgcaggagttcgttaat
aagtctctcttattctgtaatcggaatggaaagtcattttgttattatttacatgatctt
caagtagattttcttacagagaagaatcgaagtcaacttcaggatctgcacaggaagatg
gtcactcagtttcagaggtattaccagccgcatacgctatctccagatcaggaggactgc
atgtattggtacaacttcctagcctatcacatggccagtgccaatatgcacaaagaactt
tgtgcattaatgttttccctggattggatcaaagcaaaaacagaacttgtcggccctgct
catctgattcatgagtttgtggaatataggcatatattggatgaaaaggattgtgcagtc
tgtgagaattttcaagagtttttatctttaaatggacaccttcttggacgacagccattt
cctaatattgtacagctgggcctctgtgaaccagaaacttccgaagtttatcaacaagca
aagctgcaggccaagcaggaggtggatactgggcggctttacctggaatggataaacaaa
aaaactatcaagaatctgtcccgcttagttgtccgcccccacacagatgctgtttaccac
gcatgtttttctcaggatggtcagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaggccgagacaggagagaagcttcttgacatcaaagctcacgaagacgaggtg
ctgtgctgcgcattctcttcagatgacagttacatagcaacctgctcagtggataggaaa
gttaaggtttgggattctgcgactgggaagctagtgcacacctacgacgagcactcggag
caagtcaattgctgccatttcaccaacaagaacaatcaccttctggccaccggctccaat
gactgcttcctcaagctctgggatttgaatcaaaaagaatgtcgaaacaccatgtttggt
cacacgaactcagtcagccactgcaggttctcaccagacgatgagctcttggcgagttgc
tcggctgatgggactttaaagctttgggatgtgagatcagcaaacgagaggaaaagcatt
aatgtgaagcgcttcttcctgagttctgaagaccctccagaggatgtggaggtgatggtc
aaatgttgttcctggtctgcagatggtgacaaaataatagtggcagcaaaaaacaaagtc
ctcctttttgatattcatactagtggccttttggcagagatccatacaggtcatcacagc
accatccagtactgcgacttctccccctgtgaccatttggcagtgattgccctgtctcag
ttctgtgtggagttgtggaacatagactcccgcataaaggtggctgactgcagaggacat
ttaagttgggttcatggtgtgatgttttctcctgatggctcgtcatttttgacagcttct
gatgaccaaacaataagggtctgggagacaaaaaaggtatgcaagaactctgccatcgtg
ctcaagcaggagatagatgtcgtgtttcaagaaaacgaaatgatggtccttgcagttgac
aacataagaggtctacaactcattgctgggaacactggccagactgactacctgcctgaa
gcgcaagcgagctgctgctgcctcagcccacaccttgagtatgttgcattcggcgacgag
gatggagccattaagattatcgaactcccaaacaacagagttttcagttctgggattggg
cacaagaaagctgtacgacacatccagttcacagctgatgggaagacactgatttcaagt
tctgaagattctgtgattcaggtatggaattggcagacagaggactatgtatttttgcaa
gcccatcaggaaacagtaaaggacttcaggctcctgaaagattcaagattgctttcttgg
tcatttgatggaacagtgaaggtgtggaatgtcatcactggaagaatagaaagagacttt
acttgtcatcagggcacagtgctttcctgtgctatctcttctgatgccaccaagttttca
tctacttctgctgataagactgccaagatctggagttttgaacgcctttcccctcttcac
gagctgacgggccataatggctgtgtccgctgctctgccttttcgatggatggcatcctg
ttggcaactggagatgacaatggagaaatcaggatatggaatgtctcagatgggcagctt
cttcatttgtgtgctccgatttcagtagaagaaggaactgctacccacggaggctgggtg
actgatgtttgcttctctcctgacagtaagatgcttgtctctgctggaggatatcttaag
tggtggaatgttgtcactggggaatcctcacagaccttctacacaaatggaacaaacctc
aagaaaatacatgtgtcccctgacttcagaacatacgtaactgttgacaatcttggtatt
ttatacattttacaggttttagagtaa
DBGET
integrated database retrieval system
