KEGG   Arvicanthis niloticus (African grass rat): 117697924
Entry
117697924         CDS       T08817                                 
Symbol
Actb
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03082  ATP-dependent chromatin remodeling
anu04015  Rap1 signaling pathway
anu04145  Phagosome
anu04210  Apoptosis
anu04390  Hippo signaling pathway
anu04510  Focal adhesion
anu04520  Adherens junction
anu04530  Tight junction
anu04611  Platelet activation
anu04613  Neutrophil extracellular trap formation
anu04670  Leukocyte transendothelial migration
anu04714  Thermogenesis
anu04810  Regulation of actin cytoskeleton
anu04814  Motor proteins
anu04820  Cytoskeleton in muscle cells
anu04919  Thyroid hormone signaling pathway
anu04921  Oxytocin signaling pathway
anu04971  Gastric acid secretion
anu05014  Amyotrophic lateral sclerosis
anu05100  Bacterial invasion of epithelial cells
anu05132  Salmonella infection
anu05135  Yersinia infection
anu05164  Influenza A
anu05205  Proteoglycans in cancer
anu05225  Hepatocellular carcinoma
anu05410  Hypertrophic cardiomyopathy
anu05412  Arrhythmogenic right ventricular cardiomyopathy
anu05414  Dilated cardiomyopathy
anu05416  Viral myocarditis
anu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117697924 (Actb)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    117697924 (Actb)
   04390 Hippo signaling pathway
    117697924 (Actb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117697924 (Actb)
  09143 Cell growth and death
   04210 Apoptosis
    117697924 (Actb)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117697924 (Actb)
   04520 Adherens junction
    117697924 (Actb)
   04530 Tight junction
    117697924 (Actb)
  09142 Cell motility
   04814 Motor proteins
    117697924 (Actb)
   04820 Cytoskeleton in muscle cells
    117697924 (Actb)
   04810 Regulation of actin cytoskeleton
    117697924 (Actb)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    117697924 (Actb)
   04613 Neutrophil extracellular trap formation
    117697924 (Actb)
   04670 Leukocyte transendothelial migration
    117697924 (Actb)
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    117697924 (Actb)
   04919 Thyroid hormone signaling pathway
    117697924 (Actb)
  09154 Digestive system
   04971 Gastric acid secretion
    117697924 (Actb)
  09159 Environmental adaptation
   04714 Thermogenesis
    117697924 (Actb)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    117697924 (Actb)
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    117697924 (Actb)
  09172 Infectious disease: viral
   05164 Influenza A
    117697924 (Actb)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117697924 (Actb)
   05135 Yersinia infection
    117697924 (Actb)
   05100 Bacterial invasion of epithelial cells
    117697924 (Actb)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    117697924 (Actb)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    117697924 (Actb)
   05410 Hypertrophic cardiomyopathy
    117697924 (Actb)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    117697924 (Actb)
   05414 Dilated cardiomyopathy
    117697924 (Actb)
   05416 Viral myocarditis
    117697924 (Actb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anu03021]
    117697924 (Actb)
   03019 Messenger RNA biogenesis [BR:anu03019]
    117697924 (Actb)
   03036 Chromosome and associated proteins [BR:anu03036]
    117697924 (Actb)
   03029 Mitochondrial biogenesis [BR:anu03029]
    117697924 (Actb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:anu04812]
    117697924 (Actb)
   04147 Exosome [BR:anu04147]
    117697924 (Actb)
Transcription machinery [BR:anu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     117697924 (Actb)
Messenger RNA biogenesis [BR:anu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     117697924 (Actb)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     117697924 (Actb)
    NuA4 complex
     117697924 (Actb)
  Chromatin remodeling factors
   BAF complex
    117697924 (Actb)
   PBAF complex
    117697924 (Actb)
   GBAF(ncBAF) complex
    117697924 (Actb)
   SWR1 complex
    117697924 (Actb)
Mitochondrial biogenesis [BR:anu03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    117697924 (Actb)
Cytoskeleton proteins [BR:anu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     117697924 (Actb)
Exosome [BR:anu04147]
 Exosomal proteins
  Proteins found in most exosomes
   117697924 (Actb)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 117697924
NCBI-ProteinID: XP_034345148
EnsemblRapid: ENSANLG00005025761
LinkDB
Position
Unknown
AA seq 375 aa
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgacgatatcgctgcgctcgtcgtcgacaacggctccggcatgtgcaaagccggc
ttcgcgggcgacgatgctccccgggccgtcttcccctccatcgtgggccgccctaggcac
cagggtgtgatggtgggtatgggtcagaaggattcctacgtgggcgacgaggcccagagc
aagagaggcatcctgaccctgaagtaccccattgaacacggcattgtcaccaactgggac
gatatggagaagatctggcaccacaccttctacaatgagctgcgtgtggcccctgaggag
caccctgtgctgctcaccgaggcccccctgaaccctaaggccaaccgtgaaaagatgacc
cagatcatgtttgagaccttcaacaccccagccatgtacgtagccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggcattgtgatggactccggagacggggtcacc
cacactgtgcccatctatgagggctacgctctccctcatgccatcctgcgtctggacctg
gctggccgggacctgacagactacctcatgaagatcctgaccgagcgtggctacagcttc
accaccacagctgagagggaaatcgtgcgtgacatcaaagagaagctgtgctatgttgcc
ctagacttcgagcaggagatggccactgctgcatcctcttcctccctggagaagagctat
gagctgcctgacggccaggtcatcactattggcaatgagcggttccgatgccccgaggct
cttttccagccttccttcttgggtatggaatcctgtggcatccatgagactacattcaat
tccatcatgaagtgtgatgttgacatccgtaaagacctctatgccaacacagtgctgtct
ggtggcaccaccatgtacccaggcattgctgacaggatgcagaaggagattactgctctg
gctcctagcaccatgaagatcaagatcattgctcctcctgagcgcaagtactctgtgtgg
atcggcggctccatcctggcctctctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggcccctccatcgtgcaccgcaagtgcttctag

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