Arvicanthis niloticus (African grass rat): 117697928
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Entry
117697928 CDS
T08817
Symbol
Tpcn1
Name
(RefSeq) two pore calcium channel protein 1
KO
K16896
two pore calcium channel protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117697928 (Tpcn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117697928 (Tpcn1)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
117697928 (Tpcn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Pilin_N
Motif
Other DBs
NCBI-GeneID:
117697928
NCBI-ProteinID:
XP_034345153
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Position
Unknown
AA seq
817 aa
AA seq
DB search
MAVILDDDVPLILTLDEAESAPLAPSKGLGHEEVPSKNGGSHGVHNSQVPSLVPEADRSP
SSPTGHNWEMNYQEAAIYLQEGQNNDKFFTHPKDARALAAYLFVHNHFFYMMELLTALLL
LLLSLCESPAVPVLKLHAYVHATLELFALMVVVFELCMKLRWLGFHTFVRHKRTMVKTSV
LVVQFIEAIVVLVRQTSHVRVTRALRCIFLVDCRYCGGVRRNLRQIFQSLPPFMDILLLL
LFFMIIFAILGFYLFSTNPSDPYFNTLENSIVNLFVLLTTANFPDVMMPSYSRNPWSCVF
FIVYLSIELYFIMNLLLAVVFDTFNDIEKHKFKSLLLHKRTAIQHAYRLLVSQRRPAGVS
YTQFEGLMRFYKPRMSARERFLTFKALNQSNTPLLSLKDFYDIYEVAALQWKAKKNRQHW
FDELPRTAFLIFKGINILVNSKAFQYFMYLVVAVNGVWILVETFMLKGGNFISKHVPWSY
LVFLTIYGVELFMKVAGLGPVEYLSSGWNLFDFSVTAFAFLGLLALTLNMEPFYFIVVLR
PLQLLRLFKLKKRYRNVLDTMFELLPRMASLGLTLLTFYYSFAIVGMEFFNGRLSPNCCN
SSTVADAYRFINHTVGNKTKVEEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQ
TSHWSRLYFMTFYIVTMVVMTIIVAFILEAFVFRMNYNRKNQDSEVDSGIVIEKEMSKEE
LLAILELYREARGTSSDVTRLLDTLSQMEKYQQNSMVFLGRRSRTKSDLSLKMYQEEIQE
WYEEHAREQEQQQLRGSVPGPAAQQTPGSRQRSQTVT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaattttagatgacgatgtaccactcatcctgaccttggacgaggctgagagt
gctccgctggcaccttccaaaggcctgggccatgaagaggtgcccagcaaaaatgggggc
agccacggcgtccataactcccaggttcccagtctggtccccgaggccgaccgttcccct
tccagtcccactggacacaactgggagatgaattaccaagaggcagcaatctacctccag
gaaggccagaacaacgacaagttcttcacccaccccaaggatgccagggcgctggcggcc
tacctcttcgtacacaaccacttcttctacatgatggagctgctcacggccctgctcctg
ctgctgctgtccctgtgcgagtcacccgccgtccctgtgctcaagctccacgcttacgtc
cacgccaccctggagctgttcgcccttatggtggtggtatttgaactctgcatgaaatta
cggtggctgggcttccacacgttcgtccggcacaaacgcaccatggtcaagacatctgtc
cttgtggtgcagttcatcgaggccattgtggtgctggtgcggcagacatcccatgtacgt
gtaacccgggcactacgttgcattttcctggtggactgtcggtattgtggcggtgtgcga
cgcaacctgcggcagatcttccagtcactgccaccattcatggacatcctcctgttgctg
ctcttcttcatgatcatctttgccatcctcggtttctacttattctccacgaacccttct
gatccctacttcaacaccctggagaacagcatcgtcaacctgttcgtcctcctcaccaca
gccaactttccagatgtcatgatgccctcctactcccggaacccctggtcgtgcgtcttc
ttcattgtgtacctctccattgagctgtacttcatcatgaacctgctcctggccgtggtg
ttcgacaccttcaacgacatcgaaaagcacaagttcaagtctttgctgctgcacaagcgg
accgccattcagcacgcctaccgcctgctcgtcagccaacggaggccggccggtgtctcc
tacacacagtttgaaggcttgatgcgcttctacaagccccggatgagtgctcgggagcgc
ttcctgactttcaaggccctgaatcagagcaacacacctctgctcagcctgaaggacttc
tatgacatttacgaagttgctgccctgcagtggaaggcaaagaagaacagacaacattgg
tttgacgagcttccccggacagccttcctcatcttcaaagggattaacatcctcgtgaat
tccaaggccttccagtatttcatgtacttggtggtggctgtcaacggtgtctggatcctg
gtggagaccttcatgctgaaaggtgggaatttcatctcaaagcacgtgccctggagttac
ctcgtgtttcttaccatctatggagttgaactgttcatgaaggtggctggcctgggccct
gtggagtacctgtcctctggatggaacctgttcgatttctcggtcacagcgttcgccttc
ctgggactgctcgcgctgacactcaacatggagcccttctatttcattgtggtcctgcgt
ccccttcagctgctgaggttatttaagctgaagaaacgctaccgcaatgtgttggacacc
atgttcgagctgctgccgcgaatggccagcctcggcctcacactgctcaccttctactat
tccttcgccatcgtgggcatggagttcttcaacgggcgactgtctcccaactgctgcaac
tccagcacggtggccgacgcctaccgattcatcaatcacacagtgggcaacaagaccaag
gtggaggagggctattactatctcaacaactttgacaacatcctcaacagcttcgtgacc
ttgtttgaactcaccgttgtcaacaattggtacatcatcatggaaggcgtcacctcgcag
acctcccactggagccgcctgtacttcatgacgttttacatcgtgaccatggtggtgatg
accattatcgtggccttcatcctggaagccttcgtcttccgcatgaactacaaccgcaag
aaccaggactcggaagtggacagtggcatcgtcatcgagaaggaaatgtccaaggaggag
cttctggccatcctggagctttaccgcgaggcgcgaggcacctcctctgacgtcacccgg
ctgctcgacacgctctctcagatggagaaataccagcaaaactccatggtgtttctggga
cggcgatcgagaaccaaaagtgacctgagtctgaagatgtaccaggaggagatccaggag
tggtacgaggagcatgcccgggaacaggagcaacagcagctcaggggcagtgtgcccggc
cctgcagcccagcagacccctggcagtcgccagcgttcccagactgtcacctag
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