Arvicanthis niloticus (African grass rat): 117700224
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Entry
117700224 CDS
T08817
Name
(RefSeq) solute carrier family 22 member 1
KO
K08198
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04976
Bile secretion
anu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
117700224
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
117700224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117700224
Transporters [BR:
anu02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
117700224
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
117700224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
TRI12
Motif
Other DBs
NCBI-GeneID:
117700224
NCBI-ProteinID:
XP_034347991
EnsemblRapid:
ENSANLG00005024921
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MPTVDDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPDHHCWNPGVAELSQ
RCGWSPAEELNYTVPGSGSADEASFLSQCMRYEVDWNQSTLGCVDPLSSLAANRSQLPLS
PCEHGWVYDTPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCL
LATTLVTSLSGTLTAVAPDYTSMLLFRLLQGLVSKGSWVSGYTLITEFVGSGYRRTTAIL
YQVAFTVGLVGLAGVAYAIPNWRWLQLAVSLPTFFFLLYYWFVPESPRWLLSQKRTTQAV
KIMEQIAQKNGKVPPADLKMLCLEEDASEKLSPSFADLFRTPNLRKNTLILMYLWFSCAV
LYQGLIMHVGATGANLYLDFFYSSLVEFPAAFIILAIIDRIGRIYPIAASNLVTGAACLL
MIFIPHELHWLTVTLACLGRMGATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIF
TPFMVFRLMEVWQALPLILFGVLGLTAGAMTLLLPETKGVSLPETIEEAENLGKRKSKAK
ENMIYLQVQTGKPPGT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgtggatgatgtcctggagcaagttggagagtttggctggttccagaagcaa
gctttcctgttgctctgcctgatctccgcctctttagctcctatatatgtgggcatcgtc
ttcctgggatttacccctgaccaccactgctggaatcctggagtggccgagctgagccag
cggtgtggctggagcccagcagaggagctgaactacactgtgccgggctcagggtctgca
gatgaggcctccttcctcagccagtgcatgaggtatgaggtggactggaaccagagcacc
cttggctgtgtggacccactgtccagcctggctgccaacaggagccagttgccactgagc
ccctgcgagcacggctgggtgtacgacactcccggctcctccatcgtcactgagtttaac
ctcgtgtgtggagacgcctggaaagtggacctttttcagtcctgtgtgaacttgggcttc
ttcctgggctccctggttgtgggttacattgcagacaggtttggccgtaagctctgcctc
ctggcaaccactctggtcacctccctgtccggcacgttaacagcggtggccccagactat
acatccatgttgctctttcggctgctgcagggcttggtcagcaagggcagctgggtgtcc
ggctacaccttgatcacagagtttgttggctccggctacaggagaacgacggccatcttg
taccaggtggccttcacagtggggctagtggggcttgctggggtggcctacgccattcca
aactggcgctggctccagctggcggtgtccctgcccaccttcttcttcctgctgtattac
tggtttgtcccagaatccccccggtggttattgtcccagaagagaaccactcaagcggta
aagataatggagcaaattgcacagaagaacgggaaggtgccccccgctgacctgaagatg
ctctgccttgaggaggatgcctcggaaaagctgagtccttcatttgctgacctgttccgc
actcccaacctgagaaagaacaccctcatcctgatgtatttatggttctcttgtgctgta
ctgtaccagggcctcatcatgcacgtgggggccacaggggccaacctctacctggacttc
ttttattcttctctggtggaattccccgcggcattcatcatccttgccattattgaccga
attggccgcatctacccaatagcagcatcaaatctggtgacgggggcagcctgcctcctc
atgatctttatcccacatgagctgcactggttgactgttacccttgcttgccttggccgt
atgggtgccaccattgtgcttcagatggtctgcctggtgaatgctgagctgtacccaacc
ttcatcaggaatctcgggatgatggtatgttctgccctgtgtgacctgggtggaatcttc
acccccttcatggtgttcagactgatggaagtttggcaagccctgcccctcattttgttt
ggggttttgggcctgactgctggggccatgactcttcttcttccagaaaccaaaggcgtg
tctttgcctgagactattgaagaagcagagaatctggggaagaggaaatcaaaggccaaa
gaaaacatgatttaccttcaggtccaaacaggcaaacccccaggtacctga
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