Arvicanthis niloticus (African grass rat): 117702103
Help
Entry
117702103 CDS
T08817
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117702103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117702103
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117702103
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117702103
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117702103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA_30
AAA_22
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
117702103
NCBI-ProteinID:
XP_034349308
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MGKSQSKQKSDKKIAWCKDEEDIYTNPITDHYDLLKWMNRRPKPRRDSLLETFQEVHMKQ
GGLTLYSTQSLKRKNLSQNFTNLLLFQKLCPRGSENLVRKSWHSCVPEEEGHVIEIQDLF
NPSLDTQKEAQLVIIEGAAGIGKSTLVRQVRRAWKEGQLYRDRFQHVFFFSCRELAQCKQ
LSLAELIEQGQEVPTAPISQILSHPEKLLFILDGIDEPAWVLEEQNPELSLHWSQTQPVN
TLLGSLLGKSILPEASFLLTARTTTLQKIIPSLGQPCWVEVLGFAQYERENYFYKYFANV
RDATTAFIFVKSNPVLLTLCEVPWMCWLVCNCLKREMLQGSDLSLTSKTTTALYLKYLSM
KIQDQYMRIQLRALCSLAAQGICRRKTLFSESDLCNQGLAEDAIANFLEIGVIQMQPSSL
SYSFAHLCLQEFFAAMSYILKNRKKRHGDMEDDRIVGTLVEQYGRYNLFEAPTVRFLFGL
LSKEALKEMEKFFHCNFSRKAKLKLLWHILATTQPHQPPSMGLLHCLYESQEKELLTHVM
HDLQGTIVPGTNDIAHTVVQTNVKHLVIQTDMELMVVTFCIQFCCHVRSLQVNMERQKGY
ALMAPRMVLYRWTPITDASWKILFSNLKFARNLEELDLSGNPMSFCAVLNLYKTLVHPEC
QLKILWLVECGLTSTHCSLLAEVLSVHSSLTELDLQLNDLGNRGVRRLCEGLRNPACNLS
VLRLDQASLSDQVITELRTLEAKNANLLISSTWKPHGIVPTTNMDKEEVDDSPALLKQQR
QQSGDLSSMLSCLSIEPLGTEDDFWGPTGPVATEVVDRERNVYRVQLPMAGSYHCPSTGL
HFVVTRAVTIEIEFCAWSQYLNKTPLQHSHMLAGPLFDIKAEQGAVTAVYLPHFVSLQEE
TVDISLFHVAHFQEHGMVLETPARVEEHYAALESPSFSPMGILLRLIPAVGQFIPINSIT
LIYYHLYLENVTFHLYLVPNDCTIRKAIDDEEMKFQFVRINKPPPVDALYVGSRYIVSCS
KKVKIIPVELELCYRSPGESQLFSEIYIGRMDSEIMLEIRDKRHMNLLWEALLQPEDLRP
ALPRISSAPRDALSLIHFMDEHREQLVVRVTSVDPLLDKLYGVVLSEEEYEAVRAETTNQ
DKMRKLFSLSYSWNQFCKDRFYLALKETHPHLVMELLEKSRGEVVSVRF
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatctcagtccaagcagaaaagtgacaaaaagatagcttggtgtaaagatgaa
gaggacatatacaccaaccccattacagaccattatgatctgctgaagtggatgaatcgc
agacccaaaccaaggagggactctttgctagaaacatttcaagaagtacatatgaaacaa
ggaggactgactctttactctacacagtcattgaaaaggaagaatttgtcccaaaatttc
acaaacctactactattccaaaaattgtgcccaagaggctcagagaacttggtcaggaaa
agctggcattcatgtgtaccagaagaagaaggacatgtgattgagatccaagacttattt
aacccaagcttagatacccagaaagaggctcaattggtcataatagagggggctgcaggg
attgggaagtcaacactggtcaggcaggtgaggagagcctggaaggaaggccagctctac
agggatcgcttccagcatgtcttcttcttcagctgcagagagcttgcccagtgcaagcag
ctaagtttggctgagctcatagaacaaggccaggaagtgcccacagctcccatcagtcag
atcctatctcaccctgagaagctgctcttcatcctcgatggcatagatgagccagcatgg
gtcttggaggaacagaatcctgagctctctctgcactggagtcaaacacagcctgtgaac
acactactggggagtttactagggaaatccatccttcctgaggcttccttcctgctcaca
gctcggaccacaactctgcagaagatcattccttccttggggcagccatgttgggtggaa
gtcctaggattcgctcagtatgaacgggaaaactatttctacaaatattttgcaaatgta
agagatgcaactactgcttttatatttgttaaatctaacccagtgctcttgaccctgtgt
gaggttccctggatgtgctggttggtctgcaattgcctgaaaagggaaatgttgcagggg
agtgacctttcattgacctcaaagacaaccacagccctctacctgaaatacctttccatg
aaaatccaagaccagtacatgaggatccagctcagagccctttgctcactggctgctcag
gggatctgccgaagaaagaccctgttcagtgaaagtgacctctgtaaccaagggttagca
gaggatgccattgccaatttcctagagattggtgtcattcaaatgcagcccagctccctg
agctacagctttgcccacttgtgtctccaggagttctttgcagcgatgtcctacatcttg
aagaatagaaagaaaagacatggtgatatggaagatgacagaattgtgggaacactggta
gaacagtatggaagatacaacctgtttgaggcacccactgtgcgctttctatttggtctt
ttgagtaaagaggcattgaaagaaatggaaaagttctttcactgcaacttttctaggaag
gcaaagttgaagctgctatggcacatcctagcaacaacccaaccccatcaaccaccttct
atgggtttgctccactgtctgtatgaaagtcaggaaaaggaactcctgacacatgtgatg
cacgatcttcaaggaacaatagtgcctggaacaaatgacattgcacacacagtggtccag
acaaatgtgaagcacctggtgatacagacagacatggagctcatggtggtcactttctgc
attcagttctgctgtcatgtgaggagtctccaggtgaatatggaaagacagaaaggatat
gcactgatggccccaaggatggtcctgtacagatggaccccaatcactgatgccagttgg
aaaattttgttctccaatcttaaattcgccagaaacctggaggagctggacctcagtgga
aatccaatgagcttctgtgcagttctaaatctctataaaacccttgtacaccctgaatgc
caactgaagatcttgtggcttgttgaatgtggcctcacatccacacactgctcactcctg
gccgaggtgctcagtgtccactccagcttgactgagctagacctgcagctgaatgacctg
ggtaaccgtggtgtgaggcggctatgtgaggggctcaggaatcctgcctgcaacctcagt
gtcctgcggctggaccaggcctctctcagtgaccaagtgattacagagctcaggaccctg
gaagcaaagaatgcaaacctgctcatctccagcacatggaagccacatggaattgtccct
actacaaacatggataaagaagaagtagatgatagcccagccttattgaagcagcagaga
caacagtcaggtgacctttcatccatgctctcctgtctctccatagaacctttagggact
gaggacgacttctggggccctacaggacctgtggctactgaggtggttgacagagagagg
aacgtgtaccgagttcaattgcccatggctggttcctaccactgtcccagcacaggactc
cactttgtggtgacaagggcagtgacaattgagattgaattctgtgcctggagccaatac
ctgaacaagactcccttgcaacacagtcacatgttggctggacctctgtttgacatcaag
gctgagcaaggagctgtgactgcagtgtacctccctcattttgtgtccctccaagaggaa
acagtggacatctctttgttccatgttgcccactttcaagaacatgggatggtcctagaa
accccagcaagagtggaagagcattacgcagcactggaaagcccaagcttctccccaatg
ggaattctactgagattgattcctgctgttggacaattcatccccatcaactccatcaca
ttgatctactaccacctctatctcgagaatgtcacctttcacctttacctggtccccaat
gactgcactattcggaaggccattgatgatgaagaaatgaagtttcagtttgtgcgcata
aacaagccacccccagtagatgctctttatgttggttcccgatatattgtgtcctgctcc
aaaaaggtgaaaattatcccagtggaactggagctgtgctaccgaagccccggggaatct
cagctcttctctgagatctatattggacgcatggattcggagattatgttggaaatcaga
gacaagaggcatatgaatctcctatgggaggccttgctgcaaccagaagacctcagacct
gcactgcccaggatttcttcagctcccagagatgctctttctttgatacactttatggat
gagcatcgggagcagctggtggtccgagtgacatcagtggaccctctcttggacaagctt
tatggtgtggtactgagtgaagaggagtatgaggcagtgagggctgagaccacaaaccaa
gacaagatgaggaagctcttcagcctcagctactcctggaaccaattctgcaaagacaga
ttctacctagctctgaaggaaacccatcctcacctggtcatggaactccttgaaaaatca
aggggggaagtggtgtctgtgagattctga
DBGET
integrated database retrieval system
