KEGG   Arvicanthis niloticus (African grass rat): 117703656
Entry
117703656         CDS       T08817                                 
Symbol
Traf6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04010  MAPK signaling pathway
anu04064  NF-kappa B signaling pathway
anu04120  Ubiquitin mediated proteolysis
anu04140  Autophagy - animal
anu04144  Endocytosis
anu04380  Osteoclast differentiation
anu04517  IgSF CAM signaling
anu04620  Toll-like receptor signaling pathway
anu04621  NOD-like receptor signaling pathway
anu04622  RIG-I-like receptor signaling pathway
anu04657  IL-17 signaling pathway
anu04722  Neurotrophin signaling pathway
anu04936  Alcoholic liver disease
anu05132  Salmonella infection
anu05133  Pertussis
anu05135  Yersinia infection
anu05140  Leishmaniasis
anu05142  Chagas disease
anu05145  Toxoplasmosis
anu05152  Tuberculosis
anu05160  Hepatitis C
anu05161  Hepatitis B
anu05162  Measles
anu05168  Herpes simplex virus 1 infection
anu05169  Epstein-Barr virus infection
anu05170  Human immunodeficiency virus 1 infection
anu05171  Coronavirus disease - COVID-19
anu05200  Pathways in cancer
anu05222  Small cell lung cancer
anu05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
anu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117703656 (Traf6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117703656 (Traf6)
   04064 NF-kappa B signaling pathway
    117703656 (Traf6)
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117703656 (Traf6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117703656 (Traf6)
   04140 Autophagy - animal
    117703656 (Traf6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117703656 (Traf6)
   04621 NOD-like receptor signaling pathway
    117703656 (Traf6)
   04622 RIG-I-like receptor signaling pathway
    117703656 (Traf6)
   04657 IL-17 signaling pathway
    117703656 (Traf6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    117703656 (Traf6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    117703656 (Traf6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117703656 (Traf6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    117703656 (Traf6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    117703656 (Traf6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    117703656 (Traf6)
   05161 Hepatitis B
    117703656 (Traf6)
   05160 Hepatitis C
    117703656 (Traf6)
   05171 Coronavirus disease - COVID-19
    117703656 (Traf6)
   05162 Measles
    117703656 (Traf6)
   05168 Herpes simplex virus 1 infection
    117703656 (Traf6)
   05169 Epstein-Barr virus infection
    117703656 (Traf6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117703656 (Traf6)
   05135 Yersinia infection
    117703656 (Traf6)
   05133 Pertussis
    117703656 (Traf6)
   05152 Tuberculosis
    117703656 (Traf6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    117703656 (Traf6)
   05140 Leishmaniasis
    117703656 (Traf6)
   05142 Chagas disease
    117703656 (Traf6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    117703656 (Traf6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    117703656 (Traf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:anu04131]
    117703656 (Traf6)
   04121 Ubiquitin system [BR:anu04121]
    117703656 (Traf6)
Enzymes [BR:anu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117703656 (Traf6)
Membrane trafficking [BR:anu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    117703656 (Traf6)
Ubiquitin system [BR:anu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    117703656 (Traf6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-TRAF_2 zf-RING_5 TRAF3_RING U-box SlyX PspA_IM30 DUF4455 Sina_ZnF RING_XB3-XBAT31 zf-RING_11 CCDC18_1st DUF16 Spc29 UPF0242 DUF4618 Med21 DUF7310 PUMA_CC TACC_C DM EzrA TMF_DNA_bd Plectin_PPL
Other DBs
NCBI-GeneID: 117703656
NCBI-ProteinID: XP_034351317
LinkDB
Position
2:74179582..74203118
AA seq 530 aa
MSLLNCENSCGSSQSSSDCCAAMAASCSAAMKDDCVSGSASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREPVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCLQKMELRHLEDHQVHCEFAFVNCPQCQRPFQKCHVNTHIIE
DCPRRQVSCVNCAVPMAYEEKEIHDQSCPLANIVCEYCGTILIREQMPNHYDLDCPTAPV
PCTFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHNVNLALCPCDASSPSRGYRPED
PNYEETIKQLEGRLVRQDHQIRELTAKMETQSMHVSELKRTIRTLEDKVAEMEAQQCNGI
YIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVH
TMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFG
YVTFMHLEALRQGTFVKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgagtctcttaaactgtgaaaacagctgtgggtccagccagtcgtcaagtgactgctgt
gctgccatggctgcctcctgcagtgctgcaatgaaagatgactgcgtgagtggctctgcc
agcacggggaacctctccagctccttcatggaggagatccaggggtatgatgtggagttt
gacccgcctttggaaagcaagtatgagtgccccatctgcttgatggctttgcgggaacca
gtgcaaacaccatgtggccacaggttctgcaaagcctgcatcatcaaatccataagggat
gcaggtcacaagtgcccagttgacaatgaaatactgctggaaaatcagctgtttcctgac
aattttgcaaagcgagagattctttccctgacggtaaagtgcccaaataaaggctgtttg
caaaagatggaactgagacatctcgaggatcatcaagtacattgtgaatttgcttttgtg
aattgtccccagtgccaacgtcctttccagaagtgccatgttaatacacacattatcgag
gattgtcccaggagacaggtttcttgtgtaaactgtgctgtgcccatggcatatgaagag
aaagagatccatgatcagagctgtcctctggccaatatcgtctgtgagtactgcggtaca
atcctcatcagagaacagatgcctaatcattatgatctggactgcccaacagctccagtc
ccctgcacattcagtgtttttggctgtcatgaaaagatgcagaggaatcacttggcacga
cacttgcaggagaatacccagttgcacatgagactgttggcccaggctgttcataatgtt
aacctcgctttgtgtccgtgtgatgcttcctctccatcccggggatatcgcccagaggac
ccaaattatgaggaaactatcaaacagttggaggggcgcctagtaagacaggaccatcaa
atccgggagctgactgccaaaatggaaactcagagtatgcatgtgagcgagctcaaacgg
accatccgaactcttgaggacaaggttgccgaaatggaagcacagcagtgtaatgggatt
tacatttggaagattggcaactttgggatgcacttaaaatcccaagaagaggaaagacct
gtggtcattcatagccctggattctacacaggcagacctgggtacaagctgtgcatgcgc
ctgcaccttcagctcccgacggctcagcgctgtgcaaactatatatccctctttgtccac
acaatgcaaggagaatatgacagccacctcccctggcccttccagggtacaatacgcctt
acgattcttgatcagtctgaagcagttataaggcaaaaccacgaagaggtcatggatgct
aagccagaactgcttgcctttcagcgacccacaatcccacggaaccccaaaggttttggc
tatgtaacatttatgcacctggaagccttaagacagggaaccttcgttaaggatgataca
ttattagtgcgctgtgaagtctctacccgctttgacatgggtggccttcggaaggagggt
ttccagccacgaagtactgatgcaggggtgtag

DBGET integrated database retrieval system