Arvicanthis niloticus (African grass rat): 117703980
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Entry
117703980 CDS
T08817
Symbol
Fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04350
TGF-beta signaling pathway
anu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117703980 (Fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117703980 (Fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
anu00536
]
117703980 (Fbn1)
Glycosaminoglycan binding proteins [BR:
anu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117703980 (Fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
117703980
NCBI-ProteinID:
XP_034351797
LinkDB
All DBs
Position
2:complement(96384312..96583276)
Genome browser
AA seq
2877 aa
AA seq
DB search
MRRGGLLEVALAFALLLESYTSHGADANLEAGSLKETRANRAKRRGGGGHDALKGPNVCG
SRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQISPSCGSRSIQHCS
IRCMNGGSCSDDHCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCERD
YRTGPCFSVVSNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNIR
TGACQDVDECQAIPGLCQGGNCINTVGSFECKCPAGHKFNEVSQKCEDIDECSTIPGVCD
GGECTNTVSSYFCKCPPGFYTSPDGTRCVDVRPGYCYTALTNGHCSNQLPQSITKMQCCC
DVGRCWSPGVTVAPEMCPIRSTEDFNKLCSVPLVIPGRPEYPPPPIGPLPPVQPVPPGYP
PGPGIPVPRPPPEYPYPPSSREPPLVLPFNVTDYCQLVRYLCQNGRCIPTPGSYRCECNK
GFQLDIRGECIDVDECEKNPCTGGECINTQGSYTCHCRAGYQSTLTRTECRDIDECLQNG
RICNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCIC
KPGFQLASDGRYCKDINECETPGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMR
STCYGGYRRGQCVKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSGPGMT
SAGTDINECALDPDICPNGICENLRGTYKCICNSGYEVDITGKNCVDINECVLNSLLCDN
GQCRNTPGSFVCTCPKGFVYKPDLKTCEDIDECESSPCINGVCKNSPGSFICECSPESTL
DPTKTICIETIKGTCWQTVIDGRCEININGATLKSECCSSLGAAWGSPCTICQVDPICGK
GYSRIKGTQCEDINECEVFPGVCKNGLCVNSRGSFKCECPNGMTLDATGRICLDIRLETC
YLKYDDEECTLPITGRHRMDACCCSVGAAWGTEECEECPLRNSREYEELCPRGPGFATKD
ITNGKPFFKDINECKMIPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISP
DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGICHNTEGSYRC
ECPPGHQLSPNISACIDINECELSANLCPNGRCVNLIGKYQCACNPGYHPTHDRLFCVDI
DECSIMNGGCETFCTNSDGSYECSCQPGFALMPDQRSCTDIDECEDNPNICDGGQCTNIP
GEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKN
GLTGYFSDINECEIGAHNCGRHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMC
SQHADCKNTMGSYRCLCKDGYTGDGFTCTDLDECSENLNLCGNGQCLNAPGGYRCECDMG
FVPSADGKACEDIDECSLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDP
TTCISGNCVNTPGSYTCDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIG
VGVSKASCCCSLGKAWGTPCELCPPVNTSEYKILCPGGEGFRPNPITVILEDIDECQELP
GLCQGGKCINTFGSFQCRCPTGYYLNEETRVCDDVNECETPGICGPGTCYNTVGNYTCIC
PPDYMQVNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCE
QCPIPSTDEFATLCGSQRPGFVIDIYTGLPVDIDECREIPGVCENGVCINMVGSFRCECP
VGFFYNDKLLVCEDIDECQNGPVCQRNAECINTAGSYRCDCKPGYRLTSTGQCNDRNECQ
EIPNICSHGQCIDTVGSFYCLCHTGFKTNVDQTMCLDINECERDACGNGTCRNTIGSFNC
RCNHGFILSHNNDCIDVDECATGNGNLCRNGQCVNTVGSFQCRCNEGYEVAPDGRTCVDI
NECVLDPGKCAPGTCQNLDGSYRCICPPGYSLQNDKCEDIDECVEEPEICALGTCSNTEG
SFKCLCPEGFSLSSTGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGD
PCELCPTEPDEAFRQICPFGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECP
FGYILEGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNP
LLCAFRCVNTYGSYECKCPVGYVLREDRRMCKDEDECAEGKHDCTEKQMECKNLIGTYMC
ICGPGYQRRPDGEGCVDENECQTKPGICENGRCLNTRGSYTCECNDGFTASPTQDECLDN
REGYCFSEVLQNMCQIGSSNRNPVTKSECCCDGGRGWGPHCEICPFEGTVAYKKLCPHGR
GFMTNGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTACVDLNECNQAPKP
CNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPG
FTQHHTACIDNNECTSDINLCGSKGVCQNTPGSFTCECQRGFSLDQSGASCEDVDECEGN
HRCQHGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHVCGGASCHNTLGSYKCMCP
TGFQYEQFSGGCQDINECGSSQAPCSYGCSNTEGGYLCGCPPGYFRIGQGHCVSGMGMGR
GGPEPPASGEMDDNSLSPEACYECKINGYPKRGRRRRSTNETDASDIQDGSEMEANVSLA
SWDVEKPASFAFNISHINNKVRILELLPALTTLMNHNRYLIESGNEDGFFKINQKEGVSY
LHFTKKKPVAGTYSLQISSTPLYKKKELNQLEDRYDKDYLSGELGDNLKMKIQILLH
NT seq
8634 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaggagggctgctggaggtcgcgctggcgttcgccctgctcctggagtcctac
acaagccatggggcggacgccaatctggaggctgggagcctgaaggagaccagagccaat
cgggccaagagaagaggcggcggaggacacgatgcgctgaaaggacccaatgtctgtgga
tcacgttataatgcatactgttgtcctggatggaaaaccttacctggtggaaatcagtgt
attgttcccatttgccggcattcctgtggggatggattctgctcgaggccaaatatgtgc
acttgcccatctggtcagatatcgccttcctgtggctccagatccatccaacattgcagc
atccgctgtatgaatgggggcagctgcagcgatgaccactgtctgtgccagaaggggtac
attggcactcactgcggacagcctgtctgtgaaagtggctgtctcaatggagggaggtgc
gtggccccaaatcggtgtgcatgcacatacggctttactggaccccagtgtgaaagagat
tacagaacaggcccgtgtttttctgtggtgagcaaccagatgtgccagggacagctcagc
gggattgtctgcaccaaaacactctgctgtgccacagtgggccgagcctggggccacccc
tgtgagatgtgtcctgcccagcctcacccctgccgccgtggcttcattcccaacatccgg
actggagcttgtcaagatgtggatgaatgtcaggctatcccggggctgtgtcaaggagga
aattgcattaataccgttggatcttttgagtgcaaatgccctgctggacacaaatttaat
gaagtgtcacaaaaatgtgaagatattgacgagtgcagcactattcccggagtctgcgat
ggtggggagtgtacaaacacagtcagcagttacttctgcaagtgtccgcctggtttttac
acctctcccgatggcaccagatgcgtagatgttcgccctggttactgctacacagctctg
acaaatgggcactgctctaaccagctgccacagtccataaccaaaatgcagtgctgttgt
gatgttggccggtgctggtctccaggggttactgtcgctcccgagatgtgtcccatcagg
tcaactgaggatttcaacaagctgtgctccgtccctctggtaattcctgggagaccagag
tatcctcctcctcccattggcccccttcctccggttcaacctgttcctcctggctatcct
cctgggcctgggataccagtccctcggccaccaccagaatatccgtatccaccttcgtcg
cgggaaccaccattggtgctgccgttcaacgtcactgactactgtcaattggtccgctat
ctctgtcaaaatgggcgctgcattccaactcccggtagctaccgctgtgagtgcaacaag
ggcttccagttggatatccgcggcgagtgcatcgatgttgatgagtgtgagaaaaaccca
tgcactggtggagagtgtatcaacacccagggctcatacacctgtcactgccgagctggc
taccagagcacactcaccagaactgagtgcagagacatagatgagtgtctgcagaatggc
cggatctgcaacaacggtcgctgcatcaacacagacggcagcttccactgtgtgtgcaat
gcgggctttcacgtcacacgggatggaaagaactgtgaagatatggatgagtgcagcatc
agaaacatgtgcctgaatgggatgtgcatcaacgaagatggcagtttcaagtgcatctgc
aaacctggcttccaactggcatcagatggccgctactgcaaagatatcaatgagtgtgag
actcccgggatctgcatgaacggacgctgtgtgaacacggatggctcctacagatgcgaa
tgcttccccggattggctgtgggtctagatgggcgtgtgtgtgttgacacacacatgcgg
agcacatgctacggaggatacaggagaggccagtgtgtgaagccgttgtttggtgctgtt
accaaatcggaatgctgttgtgccagcaccgagtatgcatttggggaaccctgccaaccg
tgtcctgcacagaattcagcggaatatcaggcactctgcagcagtggaccaggaatgaca
tcagcaggcaccgatataaatgaatgtgcattagatcctgatatttgcccaaatggaatc
tgtgaaaatctccgtgggacctacaaatgtatatgcaactcgggatacgaagtagacata
actgggaaaaactgtgtcgatattaatgagtgtgtgctgaacagtctactttgtgacaat
ggacaatgtcgaaacacacctggaagttttgtctgtacctgccccaagggatttgtgtac
aaacctgacctaaagacctgtgaagacattgatgaatgtgaatcgagtccttgcattaat
ggagtctgcaagaacagccctggctctttcatttgtgaatgttctcctgaaagtactctg
gatccaacaaaaaccatctgcatagaaaccatcaagggcacttgctggcagactgtcatc
gacgggcgctgtgagatcaacatcaatggagccaccttgaagtccgagtgctgctcctcc
cttggtgctgcctggggaagcccgtgcactatctgtcaagttgatcccatatgcggtaaa
gggtactcaagaattaaaggcacacaatgtgaagatatcaatgagtgtgaagtgttcccg
ggagtatgcaagaatggcctatgtgtcaactccaggggctcattcaagtgcgagtgtccc
aatggaatgactttggatgctacaggaagaatctgtcttgacatccgcctggagacctgc
tacctgaagtatgacgatgaagagtgtaccttgcccatcactggccgccaccgaatggat
gcctgctgctgctcagttggggcagcctggggaacggaagagtgtgaggagtgtccattg
agaaacagccgggagtatgaggaactctgtccccgaggacccgggtttgccacaaaagac
ataacaaatgggaaacctttcttcaaagatatcaatgagtgcaagatgatccccagcctc
tgcacccacggcaagtgcaggaacaccattggcagtttcaagtgcaggtgtgacagtggc
tttgctctggattctgaagagaggaactgcacagatattgatgagtgccgcatatctcct
gacctctgtggccgaggccagtgtgtgaacaccccaggggactttgaatgcaagtgtgac
gaaggctatgaaagtggcttcatgatgatgaagaactgcatggatattgatgaatgtcag
agagatcccctcctatgtcgaggaggcatttgccacaacacagagggaagttatcgctgc
gaatgtcctcctggtcaccaactgtccccaaacatctctgcatgcattgacatcaacgag
tgtgaactgagtgcaaacctctgtcccaatgggcgttgtgtgaacctcatagggaagtac
cagtgtgcctgcaacccgggttatcaccccactcacgataggcttttctgtgtcgacatt
gatgaatgcagcataatgaacggtggttgtgagaccttctgcacaaactctgatgggagt
tatgaatgtagctgtcagccaggcttcgcactgatgccagaccagcgatcgtgcacagac
attgatgagtgtgaagataaccccaacatctgtgatggcggccagtgcacaaacatacct
ggggagtacaggtgcctgtgctatgatgggttcatggcgtctgaagacatgaagacttgt
gttgatgtcaatgagtgtgacctgaatccgaacatctgccttagtgggacctgtgaaaac
actaaaggctcgttcatctgccactgtgatatgggctattcaggaaaaaaaggaaaaaac
gggctcactggttatttttcagatattaatgaatgtgagatcggagcacacaactgtggc
agacatgctgtatgcacaaatacagcggggagcttcaagtgcagctgcagtcctggctgg
attggagacggcattaagtgcacagatctggatgaatgttctaatggaacccacatgtgc
agccaacacgcagactgcaagaacaccatggggtcatatcgctgtctctgtaaggatggc
tatacaggggatggcttcacctgcacagacctcgacgagtgctctgagaacctcaacctc
tgtggcaatggccagtgcctcaatgcccctggcgggtaccgctgtgaatgcgacatgggc
ttcgtgcccagtgctgacgggaaggcctgtgaagatattgatgagtgctcccttccaaac
atctgcgtctttggaacttgccacaacctcccgggcctcttccgttgcgagtgtgagatt
ggctatgaactggaccgaagtggtgggaactgcacagatgttaatgagtgtctggatcca
accacgtgcatcagtggaaactgtgtcaacactccaggcagttacacgtgtgactgtcct
cccgattttgagctgaatccaactcgagtcggctgtgtcgatactcgatctggaaactgc
tatctggatatccgaccccggggagacaatggagatacagcctgcagcaatgaaatcgga
gttggtgtttctaaggcttcctgctgttgttccctgggtaaagcttggggaaccccttgt
gagctgtgccctcctgtgaacacatctgagtataaaattctttgccctggaggagaaggt
tttcgtccaaatcccatcactgttatattggaagacatcgacgagtgccaggagctccca
gggctgtgccaagggggaaagtgcatcaacacttttggcagcttccagtgccgctgtcca
actggttactacctgaatgaagaaactcgagtgtgtgacgatgtgaatgaatgtgagact
cctggaatctgtggtccggggacatgttacaacaccgttggcaactatacctgcatttgt
cctccagactacatgcaagtgaatgggggaaataattgcatggacatgagaagaagtcta
tgctacagaaactattacgctgacaaccagacctgcgacggagaactcctgttcaacatg
accaagaaaatgtgctgctgctcctacaacatcggcagagcctggaacaagccctgtgaa
cagtgtcccatcccaagcacagatgaatttgctaccctctgtggaagccagaggccaggc
tttgtgattgacatttacacaggtttacccgtggatatcgatgaatgccgggagatccct
ggggtctgtgaaaatggagtgtgcatcaacatggttggcagcttcaggtgtgagtgtcca
gtgggattcttctacaatgacaagttactggtttgtgaagatatcgatgagtgtcagaat
ggccctgtgtgccagcgcaatgcagaatgcatcaacactgcaggcagctaccgctgtgac
tgtaagcccggctaccgcctcacctccacgggtcaatgcaacgatcgaaacgagtgccag
gaaatcccgaacatatgcagtcatgggcagtgcatcgacactgtgggaagcttctactgc
ctttgtcacaccggcttcaaaacaaacgtggatcagaccatgtgcttggatataaatgag
tgtgagagagatgcctgtgggaatgggacttgcagaaacacgattggctccttcaactgc
cgctgcaaccatggcttcatactgtctcacaacaatgactgcatagatgttgatgaatgt
gcaactggaaacgggaacctttgcagaaatggccagtgtgtcaatacagtggggtccttt
cagtgcaggtgcaatgaaggctacgaggtggctcccgacggcaggacctgtgtggatatc
aatgaatgtgttctggatcctgggaagtgtgcacctggaacctgtcagaacttggatggc
tcctacagatgcatctgcccgcctgggtatagtctacagaacgacaaatgtgaagatatt
gatgagtgtgttgaagagccagagatctgtgctttggggacctgcagcaacactgagggc
agcttcaaatgtctgtgtccggaagggttctccctgtcctccactggaagaaggtgccaa
gatttgcgaatgagctactgctatgcgaagtttgaaggtggaaagtgttcctcacccaaa
tccaggaaccattccaagcaggagtgctgctgtgctttgaagggagaaggctggggagac
ccctgtgagttgtgccccactgagcccgatgaggctttccgccagatctgcccctttgga
agtgggatcattgtgggccccgatgactcggcagttgatatggatgaatgcaaagaacct
gatgtctgtaaacatggacagtgcatcaacacagacggttcctatcgctgcgagtgtccc
ttcggttatattctggaagggaatgagtgtgtggataccgatgaatgctccgtgggcaac
ccttgtggcaatgggacctgcaagaatgtgattggaggttttgaatgtacctgtgaggag
ggattcgagcccggtccaatgatgacatgtgaagatataaatgaatgtgctcagaatcct
ctgctctgtgccttccgctgtgtaaatacctatgggtcctatgaatgcaagtgtcccgtt
ggatacgttctgcgagaagacaggaggatgtgcaaagatgaggatgagtgtgcagaggga
aaacacgactgtactgaaaagcaaatggagtgcaagaacctcattggtacctacatgtgc
atctgtggccctgggtaccagcgcagacctgatggagagggctgcgtagatgagaatgag
tgtcagaccaagcccggtatctgtgagaacgggcgttgcctcaacacccgggggagctac
acctgtgagtgtaacgatggcttcacggccagccccactcaggatgagtgcttggacaac
cgggaagggtactgcttttcggaggtcctgcaaaacatgtgtcagatcggctcaagcaac
aggaaccccgtcaccaagtccgagtgctgctgtgatggagggagaggctggggaccccac
tgtgagatctgccctttcgagggcacagtggcttacaagaagctgtgtccccatggccga
ggattcatgaccaacggagcagatattgatgagtgcaaggtcattcacgacgtttgccga
aatggggaatgtgtcaatgacagagggtcctatcactgcatctgtaaaactggctacact
ccagatataacagggaccgcctgtgtagatctgaatgagtgcaaccaggctcccaaaccc
tgtaattttatatgcaaaaacacagaagggagttatcagtgttcctgcccgaagggctat
attctgcaagaggacggaagaagctgcaaagatcttgatgagtgtgcaaccaagcagcat
aactgtcagttcctgtgtgttaacaccatcggtggcttcacatgcaaatgccctcccggg
tttacccaacaccacactgcctgcattgataacaatgagtgcacgtctgatatcaacctg
tgtgggtccaagggcgtttgccagaacactccggggagcttcacctgtgaatgccagagg
ggcttctcactcgatcagagtggtgccagctgtgaagatgtggacgagtgtgagggtaac
caccgctgtcaacatggctgtcagaacatcattggaggctacaggtgtagctgcccccag
ggctacctccagcattaccagtggaaccagtgtgtagatgaaaacgagtgcctgagtgca
catgtctgtggaggagcctcctgccacaacaccctggggagttacaagtgcatgtgtccc
accggcttccagtatgaacagttcagcggaggctgccaagacatcaatgagtgtggctca
tcccaggccccctgcagttatggttgctctaatactgagggtggctacctgtgtggctgt
cctccaggatacttccggataggccaagggcattgtgtttctggaatgggcatgggcaga
ggtggcccagagccacctgccagcggcgagatggatgacaactcactgtccccagaggcc
tgctacgagtgtaagatcaatggctacccaaaacgaggccggagacggagaagtacgaac
gaaacggatgcctctgacatccaggatgggtctgagatggaagccaacgtgagcctcgcg
agctgggatgtggagaagccagccagctttgcattcaatatttcccatatcaataacaag
gtccgaatcctagaactcctgccggccctcacaactctgatgaaccacaacagatacttg
attgaatctggaaatgaagatggcttctttaaaatcaaccagaaagaaggggtcagctac
cttcacttcacaaagaagaagccagtggctggaacctactccttacaaatcagcagtact
ccactttataaaaagaaagaacttaaccagttagaagacagatatgacaaagactacctc
agcggtgaactgggcgataacctgaagatgaaaattcagatcttgctgcattaa
DBGET
integrated database retrieval system
