KEGG   Arvicanthis niloticus (African grass rat): 117704234
Entry
117704234         CDS       T08817                                 
Symbol
Bdnf
Name
(RefSeq) LOW QUALITY PROTEIN: brain-derived neurotrophic factor
  KO
K04355  brain-derived neurotrophic factor
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04010  MAPK signaling pathway
anu04014  Ras signaling pathway
anu04024  cAMP signaling pathway
anu04151  PI3K-Akt signaling pathway
anu04722  Neurotrophin signaling pathway
anu05016  Huntington disease
anu05022  Pathways of neurodegeneration - multiple diseases
anu05030  Cocaine addiction
anu05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117704234 (Bdnf)
   04014 Ras signaling pathway
    117704234 (Bdnf)
   04024 cAMP signaling pathway
    117704234 (Bdnf)
   04151 PI3K-Akt signaling pathway
    117704234 (Bdnf)
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    117704234 (Bdnf)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    117704234 (Bdnf)
   05022 Pathways of neurodegeneration - multiple diseases
    117704234 (Bdnf)
  09165 Substance dependence
   05030 Cocaine addiction
    117704234 (Bdnf)
   05034 Alcoholism
    117704234 (Bdnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:anu04052]
    117704234 (Bdnf)
Cytokines and neuropeptides [BR:anu04052]
 Cytokines
  Growth factors (RTK binding)
   117704234 (Bdnf)
SSDB
Motif
Pfam: NGF NTF3_N Spaetzle
Other DBs
NCBI-GeneID: 117704234
NCBI-ProteinID: XP_034352200
LinkDB
Position
2:81692449..81721337
AA seq 362 aa
MSDPSAWRWLSSGCPPLPPRRGAPAGWLSHGPHCARDSRAWRRKPPGAARHLRLGRLXXD
RVPSAATTALGQTRRRTGPRAGRRDLERDNNVTPLPGIRELCVDPEFHQVRRVMTILVLT
MVISYFGCMKAAPMKEANVHGQGNLAYPGVRTHGTLESVNGPRAGSRGLTTTSLADTFEH
VIEELLDEDQKVRPNEENHKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMR
VRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETK
CNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKR
GR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtctgaccccagtgcctggcgctggctcagctccgggtgcccgccgctgccgccgcgc
cggggcgcacccgctggctggctgtcgcacggtccccattgcgcccgggactcccgggct
tggagaaggaaacctcctggggcggcgcgccacctccgcctggggaggctttgatgagac
cgggttccttcagctgccaccactgctttggggcagacgagaaggcgcacggggcccagg
gcagggcgcagggacctggagcgtgacaacaatgtgactccactgccggggatccgagag
ctttgtgtggaccctgagttccaccaggtgagaagagtgatgaccatccttgtccttact
atggttatttcatacttcggttgcatgaaggctgcgcccatgaaagaagccaacgtccac
ggacaaggcaacttggcctaccccggtgtgcggacccatgggactctggagagcgtgaat
gggcccagggcaggttcgagaggtctgacaacgacgtcactggctgacacctttgagcac
gtgatcgaagagctgctggatgaggaccagaaggttcggcccaacgaagaaaaccataag
gacgcggacttgtacacttcccgggtgatgctcagcagtcaagtgcctttggagcctcct
ctgctctttctgctggaggaatacaaaaattacctggatgccgcaaacatgtctatgagg
gttcggcgccactccgaccccgcccgccgtggggagctgagcgtgtgtgacagtattagc
gagtgggtcacagcggcagataaaaagactgcagtggacatgtcgggcgggacggtcaca
gtcctggagaaagtcccggtatcaaaaggccaactgaagcaatatttctacgagaccaag
tgtaatcccatgggttacacgaaggaaggctgccggggcatagacaaaaggcactggaac
tcgcaatgccgaactacccaatcgtatgttcgggcccttactatggatagcaaaaagaga
attggctggcgattcataaggatagacacttcctgtgtatgtacactgaccattaaaagg
ggaagatag

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