Arvicanthis niloticus (African grass rat): 117707904
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Entry
117707904 CDS
T08817
Symbol
Hmgcs2
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00280
Valine, leucine and isoleucine degradation
anu00650
Butanoate metabolism
anu00900
Terpenoid backbone biosynthesis
anu01100
Metabolic pathways
anu03320
PPAR signaling pathway
Module
anu_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117707904 (Hmgcs2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117707904 (Hmgcs2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117707904 (Hmgcs2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117707904 (Hmgcs2)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
117707904 (Hmgcs2)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
117707904
NCBI-ProteinID:
XP_034357383
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All DBs
Position
4:77678599..77701949
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AA seq
508 aa
AA seq
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MQRLLAPARRVLQLKRVMQETSLAPAHLLPAAQQRFSTIPPAPLAKTDTWPKDVGILALE
VYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLP
WDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWM
ESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPQAPLVLEQGLRGTHMENAYD
FYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKKAGNNQPFTLDDVQYMIF
HTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKDLEAFRGLKLEETYTNKDVDKALLKAS
LDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASF
FSFRVAKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPG
DTRNLFPGTWYLERVDEMHRRKYARCPV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcttttggctccagcaaggcgggtcctgcaactgaagagagtaatgcaggaa
acgtcgcttgcgcctgctcacctgctcccagcagcccagcagaggttttctacaatccct
cctgctcccctggccaaaacagatacatggccaaaagatgtgggcatccttgccctggaa
gtctactttccagcccaatatgtggaccaaactgacctggagaagttcaacaatgtagaa
gctgggaagtatacagtgggcttgggccagacccgtatgggcttctgttcggtccaggag
gacatcaactccctgtgcctgacagtggtgcagaggctgatggaacgcacaaagctgccg
tgggatgctgtgggccgcctggaagtgggcaccgaaaccatcattgacaagtccaaggct
gtcaaaacagtgctcatggaactcttccaggattcaggcaacactgacattgagggcata
gataccaccaacgcctgctatggtggcactgcctccctcttcaatgctgccaactggatg
gagtccagctactgggatggtcgctatgccctggtggtctgtggtgatattgcagtctac
ccaagtggtaatgcccgccccacaggtggggctggggctgtggcaatgctgatcgggcct
caggcccctctagtcctggaacaagggctgaggggaacccacatggagaacgcatatgac
ttctacaaaccaaacttggcctcagagtatccactggtggatgggaagctgtctatccag
tgctacctgcgggccttggatagatgctatgcagcctaccgcaagaagatccagaatcag
tggaagaaagctggaaacaaccagcctttcacccttgatgatgtgcaatatatgatcttc
cacacacccttttgcaagatggtccagaaatccctggctcggctgatgttcaatgacttc
ctgtcatccagcagtgacaaacagaacaacttatacaaggacctagaggccttcaggggt
ctaaagctggaagaaacctacaccaacaaggatgtagacaaggctcttttgaaggcctcc
ctggacatgttcaacaagaaaaccaaggcctccctttacctctccacaaacaacggaaac
atgtacacctcatccctctatgggtgtctggcctcacttctctcccaccactctgcccaa
gaattggctggctctaggattggagccttctcctacggctcaggcttagcagcaagcttc
ttttcattccgagtggccaaggatgcttctccaggttcccctctggagaagctggtgtct
agtgtgtcagatctgcccaaacgtctagactcccggagacgcatgtcccctgaggaattc
acagaaataatgaatcagagagagcaattttaccacaaggtgaacttctctccacctggt
gacacaagaaacctcttcccaggtacttggtaccttgaacgcgtggatgagatgcatcgc
aggaagtatgcccggtgtcccgtctaa
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