Arvicanthis niloticus (African grass rat): 117710045
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Entry
117710045 CDS
T08817
Symbol
Sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04137
Mitophagy - animal
anu04140
Autophagy - animal
anu04217
Necroptosis
anu04218
Cellular senescence
anu04380
Osteoclast differentiation
anu05014
Amyotrophic lateral sclerosis
anu05022
Pathways of neurodegeneration - multiple diseases
anu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117710045 (Sqstm1)
04137 Mitophagy - animal
117710045 (Sqstm1)
09143 Cell growth and death
04217 Necroptosis
117710045 (Sqstm1)
04218 Cellular senescence
117710045 (Sqstm1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
117710045 (Sqstm1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117710045 (Sqstm1)
05022 Pathways of neurodegeneration - multiple diseases
117710045 (Sqstm1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
117710045 (Sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710045 (Sqstm1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117710045 (Sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117710045 (Sqstm1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Mitophagy
Cargo receptors
117710045 (Sqstm1)
Pexophagy
117710045 (Sqstm1)
Aggrephagy
117710045 (Sqstm1)
Xenophagy
117710045 (Sqstm1)
ER-phagy
ER-phagy recepters
117710045 (Sqstm1)
Other autophagy associated proteins
Midbophagy
117710045 (Sqstm1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117710045 (Sqstm1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117710045 (Sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
117710045
NCBI-ProteinID:
XP_034360440
LinkDB
All DBs
Position
6:70763111..70775783
Genome browser
AA seq
441 aa
AA seq
DB search
MASFTVKAYLLGKEEATREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPTLRPGG
FQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRREHRPPCAQEASRNMV
HPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHREHSKLIFPNPFGHLPDSFSHS
RWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDARPCPTAESASAPSEDPNVNFLKNVGE
SVAAALSPLGIEVDIDVEHGGKRSRLTPTSPESSSTGTEDKSNTQPSSCSSEVSKPDGAG
EGPAQSLTEQMKKIALESVGQPEEQMESDNCSGGGDDDWTHLSSKEVDPSTGELQSLQMP
ESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQT
KNYDIGAALDTIQYSKHPPPL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcacggtaaaggcctatcttctgggcaaggaggaggcgacccgcgagatc
cgccgcttcagcttctgcttcagcccggagccggaggcagaagccgcggccggcccgggg
ccctgcgagaggctgctgagccgagtggctgtgctgttccccacgctgcggcctggcggc
ttccaggcgcattaccgcgatgaggatggcgacttggttgccttttccagtgatgaggag
ctgacaatggctatgtcctatgtgaaagatgacatcttccgcatctacattaaagagaag
aaggagtgccggcgggaacatcgcccaccatgtgctcaggaggcatcccgaaacatggtg
caccccaatgtgatttgtgatggttgcaacgggcctgtggtgggaactcgctataagtgc
agtgtgtgcccagactatgacctgtgcagcgtctgtgaggggaagggcctgcacagggag
cacagcaagctcatctttcccaacccttttggccacctccctgatagcttctctcatagc
cgctggcttcggaagctgaaacatggacattttggctggcctggctgggagatgggccca
ccggggaactggagcccacgtcctcctcgagcaggggatgctcgcccttgccccacagct
gagtcagcttctgctccatcagaggaccccaatgtcaatttcctgaagaatgtgggggag
agcgtggcagctgccctcagccctctaggcattgaggttgacattgatgtggaacatgga
gggaagagaagccgcctgacacccacctctccagaaagttccagcacaggcacagaagac
aagagcaacactcagccaagcagctgctcttcggaagtcagcaaacctgatggggccggg
gagggccctgctcagtctctgacagagcaaatgaaaaagatagctttggagtcggtggga
cagccagaggaacagatggagtcggataactgctcaggaggaggagatgatgactggaca
catttgtcttcaaaagaagtggacccatccacaggtgaactccagtctctacagatgcca
gaatcggaagggccaagctctctagacccctcacaggaaggacccacagggctgaaggaa
gctgccctgtacccacatctcccaccagaggctgatccccggctgattgagtcactctcc
cagatgctgtccatgggtttctccgatgaaggcggctggctcaccaggctcctacagacc
aagaattatgacatcggggctgctctggacacgatccagtattcaaagcaccctccacca
ttgtga
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