Arvicanthis niloticus (African grass rat): 117710281
Help
Entry
117710281 CDS
T08817
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117710281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710281
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117710281
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117710281
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117710281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
AAA_16
LRR_6
NPHP3_N
NB-ARC
AAA_30
AAA_14
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117710281
NCBI-ProteinID:
XP_034360918
LinkDB
All DBs
Position
6:50201313..50256378
Genome browser
AA seq
1219 aa
AA seq
DB search
MSGRDKNPPTSYLEQEQKGDVKQYQHELHIQALSEDSITMRPPQSEKASSTEEVQHKGQE
DLNPTHNRRKHMDLELLQNTTQAEKNLMLRTFPEVHMKQEGEIVYHTPSLKSENLLQNFT
NLLLFQKFCPGGSENLVRKSWHPCVPEEGGHVIEIQDLFGPNIGTQRMPQLVIIEGAAGI
GKSTLVRQVRRAWKEGQLYRDRFQHVFFFSCRELAQCKQLSLAELIAQGQEVPTAPIRQI
LFHPEKLLFILDGIDEPAWVLEEQNPELCLHWSQTQPVHTLLGSLLGKSIFPEASFLITA
RTTALQKLIPSLGQPCWVEVLGFTEFEREDYFYKYFPKERDAITAFRLVESNPVLLTLCE
VPWVCWLVCICLKRQMEQRRDLSLTSQTTTALCLKYLSLTIPGQHLGTQLRALCSLAAKG
ICQRRTLFSESDLCNQGLAEDAIATFLKIGVLQKQPSSLLSYSFAHLCLQEFFAAMSYIL
QESEQRHGAMEDDRIMETLVEQYGKENLFEAPTVRFLFGLLTEEGLKEMGKFVSCSHPWR
AMLKLQNILEKSQPHQPPSLGLLHCLYENQEKKLLTQVMHDLQETIVPDQNDIAHTVFQT
NVKHLVIQTDMELMVVTFCIQFCCHLRSLQLNVARQKGYKLTAPRMVLYRWTPTTNASWK
IFFSNLKLIRTLEELDLSGNPLSYSTVQCLCSILTQPGFQLKTLWLVDCGLTSTYGSLLA
LALSAHSSLTAADLQLNDLGDYGVKLLCEGLRNRGCNLSILRLDQDSLSDQVITELRALE
AKNPKLLISSTWKPHVMVPNRNMDKEEKGNSSTSFKKQRQQSGDKPMEPLGTKDDFWGPT
GPVVAEVVDTERNMYQVQLPVAGSYHCPSTGLHFVVTRAVTIEIKFCAWSQYLDKTSLQH
SHMVAGPLFDIKAEQGAVTAVYLPHFVCLQVGMVDSSLFHVAHFQEHGMVLETPARVEEH
YAVLENPSFSPMGVLLRLIPAVGQFIPITSITLIYYHLHLQDVTFHLYLIPDDCTIRKAI
DDEEMKFQFVRINKPPPLDALYVGSRYIVSGSKKVEIIPKELELCYRSPGESQLFSEIYV
GHMGSGIKLQIRDKRHMNLIWEAFLKPGDFRPALPRTAPSSKDAPSLIHFMDQHREQLVT
RVTSVDPLLDKLHSLVLSEESYEAVRAETTNQDKMRKLFSLSQSWSQACKDQFYQALKET
HPHLIMDLLEKSGGVSLGS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagagacaagaatccaccaacctcatacttggaacaagaacagaagggagat
gttaagcaatatcaacatgagctgcatatccaagcattatctgaggattctatcaccatg
agaccacctcagtctgagaaggcaagtagcacagaggaggtgcagcataaaggacaagag
gacttgaaccccacccataacaggaggaagcatatggatctggaactactacagaataca
acccaggcagagaagaacttgatgctaagaacctttccagaagtacatatgaagcaggaa
ggagagattgtttaccacacaccatcattgaaaagtgagaatttgttgcaaaatttcaca
aacctactactatttcaaaaattttgccctggaggctccgagaacttggtcaggaaaagc
tggcatccatgtgtaccagaagaaggaggacatgtgattgagatccaagacttatttggc
ccaaatataggtactcagagaatgcctcaattagtcataatagagggagctgctgggatt
gggaagtcaacactggtcaggcaggtgaggagagcctggaaggaaggtcagctctacagg
gatcgcttccagcatgtcttcttcttcagctgcagagagctggcccagtgcaagcagctg
agtctggctgagctcatagcacaaggccaggaagtgcccacagctcccatcaggcagatc
ctgtttcaccctgagaagctgctattcatcctggatggcatagatgagccagcatgggtc
ttggaggagcagaatcctgagctgtgtctgcattggagtcaaacacagcctgtgcacaca
ctgctgggcagtttattagggaaatctatctttcctgaggcttctttcctgatcacagct
cggaccacagctctgcagaaactcattccttccctggggcagccatgttgggtggaagtc
ctaggcttcactgagtttgaacgggaagactacttctacaaatattttccaaaggaaaga
gatgcaattactgcttttagattggttgaatctaacccagtgctcctgactttgtgtgag
gttccctgggtgtgctggctggtttgcatttgcctgaaaaggcagatggagcagaggaga
gatctctcactgacttcacagaccaccacagccctctgcttgaaatacctttccctgaca
atcccaggtcagcacctggggacccagctcagagccctttgttcactggctgctaagggg
atctgccaaagaaggaccctgttcagtgaaagtgacctctgtaaccaagggttagcagag
gatgccattgccactttcctgaagattggtgtccttcaaaaacagcccagctctcttctg
agctacagttttgcccacttgtgtctccaggagttctttgcagcaatgtcctacatctta
caagagagtgagcaaagacatggtgctatggaagatgacagaattatggaaacactggta
gaacagtatggaaaagaaaacctgtttgaggcacccactgtgcgctttctatttggtctt
ttgactgaagagggattgaaagaaatgggaaagtttgtttcctgcagccatccttggagg
gcaatgttgaaactacagaacatcctagagaaatcccaaccccatcaaccgccttctctg
ggtttgctccactgtctatatgaaaatcaggaaaagaagctcctgacacaagtgatgcat
gatcttcaagaaacaatagtgcctgaccaaaatgacattgcacacacagtgttccagaca
aatgtgaagcacctggtgatacagacagacatggagctcatggtggtcactttctgcatt
cagttctgttgtcatctgaggagtcttcagctgaatgtggcaagacagaaaggatataag
ctgacagccccaaggatggttctgtacagatggaccccaaccaccaatgccagctggaag
attttcttctccaatcttaaattaatcagaacactggaggaactggacctaagtggaaat
ccactgagttactctacagtgcaatgtctctgttcaattctgacacaacctggcttccaa
ctaaagaccttgtggcttgttgactgtggcctcacatctacatacggctcactcctggct
ttagcactcagtgcccactccagcctgactgcggcagaccttcagctgaatgatctgggt
gactacggagtgaagctgctgtgtgaggggctcaggaatcgtggctgcaacctcagcatc
ttgcggctggaccaggactcacttagtgaccaggttattacagagctcagggctctggag
gcaaagaatccaaagctgctcatctccagcacatggaagccacatgtgatggtccctaat
aggaacatggataaagaagaaaagggtaatagctcaacttcattcaagaagcagaggcaa
cagtcaggagataaacccatggaacctctggggactaaggatgacttctggggcccaaca
ggacctgtggttgctgaagtggttgacacagagaggaacatgtaccaagttcaattgcct
gtggctggttcctaccactgtcccagcacaggactccactttgtggtgacaagagcagtg
acaattgagattaaattctgtgcttggagccaatacctggacaagacttccttgcaacac
agtcacatggtggctggacctctatttgacatcaaagctgagcaaggagctgtgactgca
gtgtacctccctcattttgtgtgtctccaagtgggaatggtagacagctccttgttccat
gttgctcactttcaagaacatgggatggtcctagaaaccccagcaagagtggaagagcat
tatgcagtactggaaaacccaagcttctccccaatgggagttctactgagattgattcct
gctgtgggacaattcatccccatcacttccatcacactgatttactatcacctccatctc
caggacgtcacctttcacctttacctgattcccgatgactgcactattcggaaggccatt
gatgatgaagaaatgaagtttcagtttgtgcgcataaacaagccacccccattagatgct
ctttatgttggttcccgctatatcgtgtctggctccaaaaaggtggaaattatcccaaag
gaactagagctgtgctaccgaagccccggggaatcccaactcttctctgagatctacgtt
ggacacatgggctcggggattaagctacaaatcagagacaaaaggcacatgaatctgata
tgggaggcctttctgaaaccaggtgacttcagacctgcactgcccaggactgctccatcc
tccaaagatgctccttccttgatacatttcatggaccagcatcgggagcagctggtgacc
cgagtgacatcagtggatcctctcttggacaagctgcatagtctggtgctaagtgaagaa
tcatatgaggcagtgcgggctgagaccacaaaccaagacaagatgaggaagctcttcagc
ctcagccagtcctggagtcaagcctgcaaagaccaattctaccaagctctgaaggagacc
catcctcacctgatcatggacctccttgagaagtcaggtggggtctctttgggatcctga
DBGET
integrated database retrieval system
