Arvicanthis niloticus (African grass rat): 117710282
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Entry
117710282 CDS
T08817
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117710282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710282
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117710282
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117710282
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117710282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
Zeta_toxin
AAA_18
nSTAND3
AAA_30
AAA_22
AAA
AAA_5
SLFN-g3_helicase
AAA_28
NB-ARC
AAA_33
AAA_19
AAA_14
LRR_4
Motif
Other DBs
NCBI-GeneID:
117710282
NCBI-ProteinID:
XP_034360919
LinkDB
All DBs
Position
6:50345077..50396278
Genome browser
AA seq
1183 aa
AA seq
DB search
MEKSQSKQKSNTKVAQHEGQEEVDPTFKTKKHRDMELMKHRVQPERDSKIVLLKLFLPFP
EVYIKKGEETLSSILSLKKENLFQNFTNLLLFRKLYPRGSENWVRKNWHPCVPEEGGHMI
EIQDLFGPNIGTQKRPQLVLIEGAPGTGKSTLARHVRRAWKKSHLYRDRFQHVFFFSCRE
LAQCKQLSLAELIAQGQDVPTVSISQILSHPEKLLFILDGIDEPAWVLGEQNPEVCLHWS
QRQPVHTLLGSLLWKSILPEASFLLTARTTDIQNFLPSLVQLYQVDVLGFTEFERENYFY
KYFARESDAFIAFRLVKSNPVLLTLCEVPWVCWLVCTCLKKQMEQGGVLSLTSQTTTALC
LKYLSLTIPGQPLRIQLRALCSLAAKGILQRRTLFSESDLCNQGLAEDAIATFLEIGVLQ
KQPSSLSYSFAHLCLQEFFAAMSYVLEDSEERHDDMEDYRIVGKLVKRYGRQYLFEAPIV
HFLFGLFSKEGLKEMEKFFSCSLPGKRKSILLREVIWRSEPHQPHCLGLLHCLYESQEMY
LLREVMHDFQGKIIVPGPNDIGPTVVQTNVKYLVIQTDMELMVVTFCIQFCCHVRSLQLN
MEKQQGYALMAPRTVLCKRTPIADTSWKIFFFNLKYYRHLEELDLSGNPLSYSAVHSLYE
ALKYSCYELKTLWLVDCGLTSTHCSLLASVLIVHSSLTELDLRLNDLGDDGVRVLCEELN
NLVCDLRILRLDQASLSDQVIKELKTLEAKNPKLLISSTWKSHVMVPTKNMDEKEVGDNP
TSFKQEQQQSGDKPMEPLGTEDDFWGPTGPVATEVVDRERNMYKVQLPMAGSYHCPSTGL
HFVVTRAVTIEIEFCAWSQYLDKTPWQHSHMVAGPLFDIKAEQGAVTAVYLPHFVSLQDG
NVDTSLFHVAHFQEHGMVLESPAKVEQHYAVLESPSFSPVGVLLRLIPAVGQFIPITSIT
LIYYHLYFKDVTFHLYLVPNDCTIRKAIDEEEMKFQFVRINKPPPVDALYVGSRYIVSGT
KKLEIIPKELELCYRSPGESQLFSEICAGHMVSGIKLQIRDKRHMKLIWEALLKPGDIRH
VLPMVSPAPKDAPSMLHFVDQHREQLVARVTSVDPLLDRLHNLVLSEDSYEAVRAETTNQ
DKMRKLFSFSRSWSQACKDQFYQALKETHPHLVKDLLEKSLES
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatctcaatccaagcagaaaagcaacacaaaggtagctcagcatgaaggtcaa
gaggaagtggaccccaccttcaaaacaaagaaacacagggatatggagctgatgaagcac
agagtccagccagagagggactctaagatagttctgctcaaactttttcttccctttcca
gaagtttatataaagaaaggagaagagactctttcttctatactgtcattgaaaaaggaa
aatttattccaaaatttcacaaacctactactcttccgaaaattgtacccaagaggctca
gagaactgggtcaggaaaaactggcatccatgtgtaccagaagaaggaggacatatgatt
gagatccaagacttatttggcccaaacataggtacccagaaaaggcctcaattagtctta
atagaaggggctcctgggactgggaagtcaacactagccaggcatgtgaggagagcctgg
aagaaaagtcacctctacagggatcgcttccagcatgtcttcttcttcagctgcagagag
ctggcccagtgcaagcagctgagtctggctgagctcatagcacaaggccaggatgtgccc
acagtttctatcagtcagatcctgtctcaccccgagaagctgctcttcatcctggatggc
atagatgagccagcatgggttttgggggagcagaatcctgaggtctgtctgcactggagt
caaagacagcctgtgcacacactgctggggagtttgctgtggaaatccatccttcctgag
gcttccttcttgcttacagctcggacaacagatatacagaatttccttccttctttggtg
cagttatatcaggtggacgtcctaggattcactgagtttgaacgggagaattacttctac
aaatattttgcaagagaaagtgatgcatttattgcatttagattggttaaatctaatcct
gtgctcttgaccctgtgtgaggttccctgggtgtgctggctggtctgcacttgcctgaaa
aagcagatggagcaaggtggggtactctcactgacatcacagaccaccacagccctctgc
ctgaaatacctttccctgacaatcccaggtcagcccctaaggatccagctcagagccctc
tgctcactggctgctaaggggatcttgcaaagaaggaccctgttcagtgaaagtgacctc
tgtaaccaagggttagcagaggatgccattgccactttcctggagattggtgtccttcaa
aagcagcccagctctctgagctacagctttgcccacttgtgtctccaggagttttttgca
gcgatgtcctatgtcttggaggacagtgaggaaagacatgatgatatggaagattacaga
attgtgggaaaattggtaaaacggtatggaagacaatacctgtttgaggcacccattgtg
cacttcctatttggtctttttagtaaagagggattaaaagaaatggaaaagttcttttca
tgcagccttcctgggaagagaaagtcgatactgctaagggaagtcatatggaggtccgaa
ccccatcaaccacattgtctgggtttgctccactgtctgtatgaaagtcaggaaatgtat
ctcctgcgagaggtgatgcatgactttcaaggaaaaataatagtgcctggcccaaatgac
attggacccacagtggtccaaacaaatgtgaagtacctggtgatacagacagacatggag
ctcatggtggtcactttctgcattcagttctgctgtcatgtgaggagtctccagctgaat
atggaaaaacagcaaggatatgcactgatggcaccaaggacggtcctgtgcaagaggacc
ccaatcgctgataccagttggaagattttcttcttcaatcttaagtactatagacacttg
gaggagctggacctaagtggaaatccactaagctactctgctgtacacagtctttatgag
gccctgaaatactcttgctatgaactaaagaccttgtggcttgttgactgtggcctcaca
tccacacactgctcactcctggcctcagttctcattgtccactccagcctgactgagcta
gacctgcggctgaatgacctgggtgatgatggtgtgagggtgctctgtgaggaactcaat
aatcttgtgtgcgacctcagaatcctgcggctggaccaggcctctctcagtgaccaggtg
attaaagaactcaagactctggaggcaaagaatccaaagctgctcatctccagcacatgg
aaatcacacgtgatggtccctactaagaacatggatgaaaaagaagtgggtgataaccca
acctcattcaagcaggaacaacaacagtcaggagacaaaccaatggaacctctggggact
gaggacgacttctggggccctacaggacctgtggctactgaggtggttgacagagagagg
aacatgtacaaagttcaattgcccatggctggttcctaccactgtcccagcacaggactc
cactttgtggtgacaagggcagtgacaattgagattgaattctgtgcctggagccaatac
ctggacaagactccctggcagcatagtcacatggtggctggacctctgtttgacatcaag
gctgagcaaggagctgtgactgctgtgtacctccctcattttgtgtcccttcaagatgga
aatgtggacacctccttgttccatgttgcccactttcaagaacatggaatggtcctagaa
agcccagcaaaggtggaacagcattacgcagtactagaaagcccaagcttctccccagtg
ggagttctactgagattgattcctgctgttggacaattcatccccatcacttccatcaca
ttgatctactatcacctctatttcaaggacgtcacctttcatctttatctggtccccaat
gactgcactattcggaaggccattgatgaggaagaaatgaagtttcagtttgtgcgcata
aacaagccacccccagtggacgctctttatgttggttcccgctatattgtgtctggcacc
aaaaagttggaaattatcccaaaggaactggaactgtgttaccgaagcccaggggaatcc
cagctcttctctgagatctgcgctggacacatggtttcagggattaagctgcaaatccga
gacaagaggcatatgaagctcatatgggaggccttgctgaaaccaggagacatcagacat
gtactacctatggtttctccagcccccaaagatgctccttccatgctacactttgtggac
caacatcgggagcagctggtggccagagtgacatcagtggaccctctactggacaggctg
cataatctggtgctgagtgaagattcctatgaggcagtgcgggctgagaccacaaatcaa
gacaagatgaggaagctcttcagcttcagccgatcctggagtcaagcctgcaaagaccaa
ttctaccaagctctgaaggagacccaccctcacctggttaaggatctccttgagaagtcc
ttagagtcctga
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integrated database retrieval system
