Arvicanthis niloticus (African grass rat): 117710286
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Entry
117710286 CDS
T08817
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117710286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710286
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117710286
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117710286
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117710286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA_30
AAA_22
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
117710286
NCBI-ProteinID:
XP_034360923
LinkDB
All DBs
Position
6:50619096..50669228
Genome browser
AA seq
1189 aa
AA seq
DB search
MGKSQSKQKSDKKIAWCKDEEDIYTNPITDHYVLLKRMNRRPKPRRDSLLETFQEVHMKQ
GGLTLYSTQSLKRKNLSQNFTNLLLFQKLCPRGSENLVRKSWHSCVPEEEGHVIEIQDLF
NPSLDTQKEAQLVIIEGAAGIGKSTLVRQVRRAWKEGQLYRDRFQHVFFFSCRELAQCKQ
LSLAELIEQGQEVPTAPISQILSHPEKLLFILDGIDEPAWVLEEQNPELSLHWSQTQPVN
TLLGSLLGKSILPEASFLLTARTTTLQKIIPSLGQPCWVEVLGFAQYERENYFYKYFANV
RDATTAFIFVKSNPVLLTLCEVPWMCWLVCNCLKREMLQGSDLSLTSKTTTALYLKYLSM
KIQDQYMRIQLRALCSLAAQGICRRKTLFSESDLCNQGLAEDAIANFLEIGVIQMQPSSL
SYSFAHLCLQEFFAAMSYILKNRKKRHGDMEDDRIVGTLVEQYGRYNLFEAPTVRFLFGL
LSKEALKEMEKFFHCNFSRKAKLKLLWHILATTQPHQPPSMGLLHCLYESQEKELLTHVM
HDLQGTIVPGTNDIAHTVVQTNVKHLVIQTDMELMVVTFCIQFCCHVRSLQVNMERQKGY
ALMAPRMVLYRWTPITDASWKILFSNLKFARNLEELDLSGNPMSFCAVLNLYKTLVHPEC
QLKILWLVECGLTSTHCSLLAEVLSVHSSLTELDLQLNDLGNRGVRRLCEGLRNPACNLS
VLRLDQASLSDQVITELRTLEAKNANLLISSTWKPHGMVPTTNMDKEEVDDSPALLKQQR
QQSGDLSSMLSCLSIEPLGTEDDFWGPTGPVATEVVDRERNLYRVQLPMAGSYHCPSTGL
HFVVTRAVTIEIEFCAWSQYLNKTPLQHSHMVAGPLFDIKVEQGAVTAVYLPHFVALQEE
TVDISLFHVAHFQEHGMVLETPARVEEHYAALESPSFSPMGILLRLIPAVGQFIPINSIT
LIYYHLYLENVTFHLYLVPNDCTIRKAIDDEEMKFQFVRINKPPPVDALYVGSRYIVSCS
KKVKIIPMELELCYRSPGESQLFSEIYIGRMDSEIMLEIRDKRHMNLLWEALLQPEDLRP
ALPRISSAPRDALSLIHFMDEHREQLVVRVTSVDPLLDKLYGVVLSEEEYEAVRAETTNQ
DKMRKLFSLSYSWNQFCKDRFYLALKETHPHLVMELLEKSRGEVVSVRF
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatctcagtccaagcagaaaagtgacaaaaagatagcttggtgtaaagatgaa
gaggacatatacaccaaccccattacagaccattatgttctgctgaagcggatgaatcgc
agacccaaaccaaggagggactctttgctagaaacatttcaagaagtacatatgaaacaa
ggaggactgactctttactctacacagtcattgaaaaggaagaatttgtcccaaaatttc
acaaacctactactattccaaaaattgtgcccaagaggctcagagaacttggtcaggaaa
agctggcattcatgtgtaccagaagaagaaggacatgtgattgagatccaagacttattt
aacccaagcttagatacccagaaagaggctcaattggtcataatagagggggctgcaggg
attgggaagtcaacactggtcaggcaggtgaggagagcctggaaggaaggccagctctac
agggatcgcttccagcatgtcttcttcttcagctgcagagagcttgcccagtgcaagcag
ctaagtttggctgagctcatagaacaaggccaggaagtgcccacagctcccatcagtcag
atcctatctcaccctgagaagctgctcttcatcctcgatggcatagatgagccagcatgg
gtcttggaggaacagaatcctgagctctctctgcactggagtcaaacacagcctgtgaac
acactactggggagtttactagggaaatccatccttcctgaggcttccttcctgctcaca
gctcggaccacaactctgcagaagatcattccttccttggggcagccatgttgggtggaa
gtcctaggattcgctcagtatgaacgggaaaactatttctacaaatattttgcaaatgta
agagatgcaactactgcttttatatttgttaaatctaacccagtgctcttgaccctgtgt
gaggttccctggatgtgctggttggtctgcaattgcctgaaaagggaaatgttgcagggg
agtgacctttcattgacctcaaagacaaccacagccctctacctgaaatacctttccatg
aaaatccaagaccagtacatgaggatccagctcagagccctttgctcactggctgctcag
gggatctgccgaagaaagaccctgttcagtgaaagtgacctctgtaaccaagggttagca
gaggatgccattgccaatttcctagagattggtgtcattcaaatgcagcccagctccctg
agctacagctttgcccacttgtgtctccaggagttctttgcagcgatgtcctacatcttg
aagaatagaaagaaaagacatggtgatatggaagatgacagaattgtgggaacactggta
gaacagtatggaagatacaacctgtttgaggcacccactgtgcgctttctatttggtctt
ttgagtaaagaggcattgaaagaaatggaaaagttctttcactgcaacttttctaggaag
gcaaagttgaagctgctatggcacatcctagcaacaacccaaccccatcaaccaccttct
atgggtttgctccactgtctgtatgaaagtcaggaaaaggaactcctgacacatgtgatg
cacgatcttcaaggaacaatagtgcctggaacaaatgacattgcacacacagtggtccag
acaaatgtgaagcacctggtgatacagacagacatggagctcatggtggtcactttctgc
attcagttctgctgtcatgtgaggagtctccaggtgaatatggaaagacagaaaggatat
gcactgatggccccaaggatggtcctgtacagatggaccccaatcactgatgccagttgg
aaaattttgttctccaatcttaaattcgccagaaacctggaggagctggacctcagtgga
aatccaatgagcttctgtgcagttctaaatctctataaaacccttgtacaccctgaatgc
caactgaagatcttgtggcttgttgaatgtggcctcacatccacacactgctcactcctg
gccgaggtgctcagtgtccactccagcttgactgagctagacctgcagctgaatgacctg
ggtaaccgtggtgtgaggcggctatgtgaggggctcaggaatcctgcctgcaacctcagt
gtcctgcggctggaccaggcctctctcagtgaccaagtgattacagagctcaggaccctg
gaagcaaagaatgcaaacctgctcatctccagcacatggaagccacatggaatggtccct
actacaaacatggataaagaagaagtagatgatagcccagccttattgaagcagcagaga
caacagtcaggtgacctttcatccatgctctcctgtctctccatagaacctttagggact
gaggacgacttctggggccctacaggacctgtggctactgaggtggttgacagagagagg
aacttgtatcgagttcaattgcccatggctggttcctaccactgtcccagcacaggactc
cactttgtggtgacaagggcagtgacaattgagattgaattctgtgcctggagccaatac
ctgaacaagactcccttgcaacacagtcacatggtggctggacctctgtttgacatcaag
gttgagcaaggagctgtgactgctgtgtacctccctcattttgtggctctccaagaggaa
acagtggacatctctttgttccatgttgcccactttcaagaacatgggatggtcctagaa
accccagcaagagtggaagagcattacgcagcactggaaagcccaagcttctccccaatg
ggaattctactgagattgattcctgctgttggacaattcatccccatcaactccatcaca
ttgatctactaccacctctatctcgagaatgtcacctttcacctttacctggtccccaat
gactgcactattcggaaggccattgatgatgaagaaatgaagtttcagtttgtgcgcata
aacaagccacccccagtagatgctctttatgttggttcccgatatattgtgtcctgctcc
aaaaaggtgaaaattatcccaatggaactggagctgtgctaccgaagccccggggaatct
cagctcttctctgagatctatattggacgcatggattcggagattatgttggaaatcaga
gacaagaggcatatgaatctcctatgggaggccttgctgcaaccagaagacctcagacct
gcactgcccaggatttcttcagctcccagagatgctctttctttgatacactttatggat
gagcatcgggagcagctggtggtccgagtgacatcagtggaccctctcttggacaagctt
tatggtgtggtactaagtgaagaggagtatgaggcagtgagggctgagaccacaaaccaa
gacaagatgaggaagctcttcagcctcagctactcctggaaccaattctgcaaagacaga
ttctacctagctctgaaggaaacccatcctcacctggtcatggaactccttgaaaaatca
aggggggaagtggtgtctgtgagattctga
DBGET
integrated database retrieval system
