Arvicanthis niloticus (African grass rat): 117710287
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Entry
117710287 CDS
T08817
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117710287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710287
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117710287
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117710287
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117710287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
nSTAND3
NB-ARC
AAA_22
AAA_30
AAA_14
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117710287
NCBI-ProteinID:
XP_034360924
LinkDB
All DBs
Position
6:50720945..50766984
Genome browser
AA seq
1227 aa
AA seq
DB search
MGESQSRHEKITKETQHGDQQDVCFAFETMSQMQMETKDQHSLLGRLQSLLRWPSTSNDM
SLIHHIYGKQQTSDHESRRRSLLSKKDHVNWETDKSECRSKGNIPIIYEKQGETICPIQS
FKKYLLQNFTRLLLLRKLCPRGSENLVRKSWHSCVPEEGGHMIEIQDLFNPSLDTQKEPR
LVIVEGAAGIGKSTLARHVRRAWKEGQLYRDRFQHVFFFSCRELAQCKQLSLAELIAQGQ
EVPTAPISQILSHPEKLLFILDGIDEPAWVLEEQNPELCLHWSQTQPVHTLLGSLLGESI
LPEASFLLTARTTALQKIIPSLKQPCWVEVLGFSEFERKVYFYKYFAEEGAAIIDFSLIE
SNPVLLTLCEVPWVCWLVCTCLKKQMEQGGDLSLTSQTTTALCLKYLSLIIPGQHVRIQL
RALCSLAAEGICQRRTLFSESDLCNQGLAQDAIATFLKIGILQRQPSSLSYSFAHLCLQE
FLTAMFYILEDSEERHNDMENDRILETLVEWYGRQNLCKVPTVRFIFGLFNKQGMREMEK
IFGCKPPWKTKFKLLWRTIGYLPYQLHHLGLFHCLYENWEEELLTDVMYSFHVTKPDSNS
MEAILVQTNMNHLVVQTDMELMAVTFCLKFCYQVTTLQLNRKGPQGHELTPPRMVLCRWT
PITDASWKIFFFNLKFTRNLEELDLSGNPLSYSAVQSLCTTLRYPDCQLKTLWLINCGLT
STHCKDLAPALCACSSLIELDLQLNDLGDDGVRLLCDELRNPACKLSNLWLDQASLSDQM
IIELRALTAENPMLFISSTWKPYVMVPTENMDEEEVGGSPTSFKKERQQSVDKPMETLGT
DDDFWGPTGPVATEVVDRERNLYRVQLPMAGSYNCPSTGLHFVVTRAVTIEIEFCSWSQY
LDKTPLQHSHMVVGPLFDIKAEQGAVTAVYLPHFVFLQEETVDISLFHVAHFQEHGVVLE
TPAKVEQHYAVLENPSFSPMGVLLRLIPAVGYFIPITSITLIYYPLYLEDVTFHLYLVPN
DCTIRKAIDDEEMKFQFVRINKPPPVDALYVGSRYIVSGSKKVEIIPKELELCYRSPGES
QLFSEIYIGHMDSEIMLQIRDKRHMNLVWEALLKPGDLRPALPRIAPVPKDVPSLLHFMD
HHREQLVARVTSVDFLLDKLHSLVLSEEDYEAVRAEITNQDKMRKLFSLSRSWSWDCKDQ
FYQALKETHPHLIMDLLEKLGGVSVRS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatctcagtccagacatgaaaaaatcacaaaggagactcagcatggagatcaa
caggatgtctgctttgcctttgaaacaatgagccagatgcagatggagaccaaagaccag
cactctttgctaggacgtctccaatcccttctcagatggccaagcacatccaatgacatg
tcccttatccaccacatctatggaaaacagcagacctcagatcatgagtcaaggagacgc
tctcttctgtcaaaaaaggatcatgttaactgggaaactgacaagtctgaatgtagaagc
aaagggaacattccaataatatatgagaagcaaggagagactatttgccccatacagtcc
ttcaaaaagtatttgctccaaaatttcacaaggctacttctcctacgaaaattgtgccca
agaggctcagagaacttggtcaggaaaagctggcattcatgtgtaccagaagaaggagga
catatgattgagatccaagacttatttaatccaagcttagatacccagaaagagcctcga
ttagtcatagtagagggtgctgcagggattggcaagtcaacactggctaggcatgtgagg
agagcctggaaggaaggccagctctacagggatcgcttccagcatgtcttcttcttcagc
tgcagagagctggcccagtgcaagcagctgagtctggctgagctcatagcacaaggccag
gaagtgcccacagctcccatcagtcagatcctgtctcaccctgagaagctgctcttcatc
ctcgatggcatagatgagccagcatgggtcttggaggagcagaatcctgagctatgtcta
cactggagtcaaacacagcctgtgcacactctgctgggaagtttactaggggaatccatc
cttcctgaggcttccttcctgctcacagctcggaccacagctctgcagaagatcattcct
tccttgaagcagccatgttgggtggaagtcctggggttctctgagtttgaacggaaggtc
tatttctacaaatactttgcagaagaaggagctgcaattatagattttagtttaattgaa
tcaaacccagtgctcctgaccctgtgtgaggttccctgggtgtgctggctggtctgcact
tgcctgaaaaagcagatggagcagggtggagacctctccctgacctcacagaccaccaca
gccctctgcctgaaatacctttccctgataatcccaggtcagcacgtgaggatccagctc
agagccctctgctcactggctgctgaggggatctgccaaagaaggaccctgttcagtgaa
agtgacctctgtaaccaagggttagcacaggatgccattgccactttcctgaagattggc
atccttcaaaggcagcccagctctctgagctacagctttgcccacttgtgtctccaggag
ttcttgacagcgatgttctacatcttggaggatagtgaggaaagacataatgatatggaa
aatgacagaattttggaaacactggtagaatggtatggaagacaaaacctgtgtaaagta
cccactgtgcgctttatatttggtctttttaataaacagggaatgagagaaatggaaaag
atctttggctgcaagcctccttggaagacaaagtttaagctgctatggagaaccataggg
tacctaccctatcaacttcatcatctgggtttgttccactgtctgtatgagaactgggaa
gaggagctcctgacagatgtgatgtatagttttcacgtaacaaagcctgactcaaattcc
atggaagccatattggtccagacaaacatgaatcacctggtggtacagacagacatggag
ctcatggctgtcactttctgccttaagttctgctatcaggtgacgactcttcagctgaac
agaaaagggccgcagggacatgagttgacgccccccaggatggtcctgtgcaggtggacc
ccaatcactgatgccagttggaagattttcttcttcaatcttaaattcacaagaaacctg
gaggagctggacctaagtggaaatccactgagttactctgcagtgcaaagtctctgtaca
acccttagataccctgactgccaactaaagaccttatggcttatcaactgtggcctcaca
tccacacactgcaaagacctggccccagcactctgtgcctgttccagcctgatagagctt
gacctgcagctgaacgacctgggtgatgatggtgtgaggctgttgtgtgatgaactcagg
aatcctgcttgcaaactcagcaacctgtggctggaccaggcttctctcagtgaccagatg
attatagagctcagggccctgacagcagagaatccaatgctgttcatctccagcacatgg
aagccatatgtaatggtccccactgagaacatggatgaagaagaagtgggtggtagccca
acctcattcaagaaggagcgacaacagtcagtagataaacccatggaaactctgggaact
gatgatgacttctggggcccaacaggacctgtggctactgaggtggttgacagagagagg
aacctgtaccgagttcaattgcccatggctggttcctacaactgtcccagcacaggactc
cactttgtggtgacaagggcagtgacaattgagattgaattctgttcctggagccaatac
ctggacaagactcccttgcaacacagtcacatggtggttggacctctgtttgacatcaag
gctgagcaaggagctgtgactgctgtctacctccctcattttgtgttcctccaagaggaa
acagtggacatctccttgttccatgttgcccactttcaagaacatggggtggttctagaa
accccagcaaaggtggaacagcattacgcagtactggaaaacccaagcttctccccaatg
ggagttctactgagattgattcctgctgttggatacttcatccccatcacttccatcaca
ttgatctactatcccctctatctagaggatgtcacctttcacctttacctggtccccaat
gattgcactattcggaaggccattgatgatgaggaaatgaagttccagtttgtgcgcata
aacaagccacccccagtggatgctctttatgttggttcccgctatatcgtgtctggctcc
aaaaaggtggaaattatcccaaaggaactggagctatgctaccgaagccctggggaatct
cagctcttctctgagatctacattggacatatggattcagagatcatgttgcaaatcaga
gacaagaggcatatgaatcttgtatgggaggccttgctgaaaccaggagacctcagacca
gcactgcccaggattgctccagtccccaaagatgttccttccttgctacatttcatggac
caccatagggagcagctggttgcccgggtgacatcagtggacttcctattagacaaactg
catagtctggtgctaagtgaagaagattatgaggcagtgcgggctgagatcacaaaccaa
gacaagatgaggaagctcttcagcctcagccgatcctggagctgggattgcaaagaccaa
ttctaccaagctctgaaggagacccatcctcacctgatcatggacctccttgagaagttg
ggtggggtctctgttagatcctga
DBGET
integrated database retrieval system
