Arvicanthis niloticus (African grass rat): 117711176
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Entry
117711176 CDS
T08817
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117711176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117711176
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117711176
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117711176
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117711176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
AAA_16
LRR_6
NPHP3_N
AAA_22
AAA_30
nSTAND3
NB-ARC
AAA_14
Motif
Other DBs
NCBI-GeneID:
117711176
NCBI-ProteinID:
XP_034362540
LinkDB
All DBs
Position
6:50272889..50324126
Genome browser
AA seq
1177 aa
AA seq
DB search
MEESQSMQKSNTKVGQYEGQENMDLTFKTKTDTKVGLMKHRVQPERDSKIVSFPEVYMNQ
EVSLYDTWPLKMQNLFQNFTNLLLFQKLCTRGSEDLVRKSWHSCVPEKEGHMIEIQDLFG
PNIQKRPQLVIIEGAAGIGKSTLVRHVRRAWKEGHLYRNCFQHVFFFSCRELAQCKQLSL
AELIAQGQEVHTASIRQILSHPEKLLFILDGIDEPAWVLEEQNPELCLHWSQTQPVNTLL
GSLLGQSVLTEASFLLTTRTTALQKIIPSLGQPRRVEVLGFSEFERKDYFYKHFARKRDA
ITTFRLVKSNPVLLTLCEVPWVCWLVCTCLKKQMEQSGDFSLTSQTTTALCLKYISLTIP
GKHMGTQLRALCSLAAQGICQKRTLFSESDLCNQGFAEDAIATFLKIGVLQKQPSSLSYS
FAHLCLQEFFAAMSYILEDSEERHGDMEDDRIVETLVEQYGRQNLFEAPTVCFLFGLLNE
EGLKEMEKLFLCSFPGKTKLKLLWQILGKSQPHQPPCLGLLHCLYENQEKELLTHVMHDL
QGTIVPGTNDIAHTVFQTNVKHLVIQTDMELMVVTFCIQFCCPVRSLQVNMGRQKGYALM
APRIVLHRWTPITDASWKIFFSNLKFTRNLEELDLSRNPLSYFAVYSLCRTLRQPGCQLK
TLWLVDCGLTSRHCLRLASVLSVHSSLTEVDLQLNDLGDDGVRLLCKRLRKRACNLSILR
LDQASLSDQVIKELKTLEAKNPKLLISSTWKPHVIVPAKNMDEEEVSDNPTSFKQEQQQP
GDKPMEPPETEIDFWGPTGCVATEIVDRERNMYRVPLPMAGSYHCPSTGLHFVVTRAVTI
EIEFCAWSQYLDKTPLQHSYMVVGPLFDIKVEQGAVTAVYLPHFVALQDGKVDTSLFHVA
HFQEHGMVLESPARVEEHYTVLESPSFSPIGVLLRLIPAVRQFIPINSITLIYYHFYDKD
VTFHLYLVPNDCTIRKAIDDEEMKFQFVRINKPPPVRALYVGSHYILSGSKKVEIIPKEL
ELCYRSPGESQLFSEIYVGHMDSGFKLKIREKRHMNLVWEALLKPGDIRHAPCRVSPAPK
DAPSMLHFVDQHREQLVARVTSVDSLLDKLHSQVLSEDSYEAVRAETTNQDKMRKLFSFS
PSWSQACKDQFYQALKETHPHLVMDHFEKSGGVSLGS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctcaatccatgcagaaaagtaacacaaaggtgggtcagtatgaaggtcaa
gagaacatggacctcaccttcaaaacaaagacagatacaaaggtggggctgatgaagcac
agagtccagccagagagggactctaagatagtatcctttccagaagtatatatgaatcaa
gaagtgagtctttatgacacatggccattgaaaatgcagaatttgttccaaaatttcaca
aatctactactcttccaaaaattgtgcacaagaggctcagaggacttggtcaggaaaagc
tggcattcatgtgtaccagaaaaagaaggacatatgattgagatccaagacttatttggc
ccaaacatccagaaaagacctcaattagtcataatagagggtgctgctgggattgggaag
tcaacactggtcaggcatgtgaggagagcctggaaggaaggccatctctacagaaattgc
ttccaacatgtcttcttcttcagctgcagagagctagcccagtgcaagcagctgagtctg
gctgagctcatagcacaaggccaggaagtacatacagcttccattaggcagatcttgtct
caccctgaaaagctactctttatcctggatggcatcgatgagccagcatgggtcttagag
gagcagaatcctgagctatgcctgcattggagtcaaacacagcctgtgaacactcttctg
ggaagtttactaggacaatccgtccttactgaggcttccttcctgctcacaactcggacc
acagctctgcagaagatcattccttccttggggcagccacgcagggtagaggtcctgggg
ttttctgagtttgaacggaaggactatttctacaaacattttgcaagaaaaagagatgca
attactacatttagattggttaaatctaatcctgtgctcctgaccctgtgtgaggttccc
tgggtgtgctggctggtctgcacttgcctgaaaaagcagatggagcagagtggagacttc
tcactgacctcacagaccaccacagccctctgcctgaaatacatttccctgacaatccca
ggtaagcacatggggacacagctcagagccctttgctcactggctgctcaggggatctgc
caaaaaaggaccctgttcagtgaaagcgacctctgtaaccaagggtttgcagaggatgcc
attgccactttcctgaagattggtgtccttcaaaaacagcccagctccctgagctacagc
tttgcccatttgtgtctccaggagttctttgcagcgatgtcctacatcttggaggacagt
gaggaaagacatggtgatatggaagatgacagaattgtggagacactggtagaacagtat
ggaagacaaaacctctttgaggcacccactgtgtgcttcctatttggtcttttgaatgaa
gagggattgaaagaaatggaaaagttatttttgtgcagctttcctggaaagacaaagttg
aagctgctatggcagatcctagggaaatcccaaccccatcaacctccttgtctgggtttg
ctccactgtctgtatgaaaatcaggaaaaggagctcctgacacatgtgatgcacgatctt
caaggaacaatagtgcctggaacaaatgacattgcacacacagtgttccagacaaacgtg
aagcacctggtgatacagacagacatggagctcatggtggtcactttctgcattcagttc
tgctgtcctgtgaggagtctccaggtgaatatgggaagacagaaaggatatgcactgatg
gctccaaggattgtcctgcacagatggaccccaatcactgatgccagttggaagattttc
ttctccaatcttaaattcaccagaaacctggaggagctggacctaagtcgaaatccactg
agctactttgcagtatacagtctttgtaggaccctgagacagcctggctgccaactaaag
accttgtggcttgttgactgtggcctcacatccagacactgcttacgcctggcctcagtg
ctcagtgtccactccagcctgactgaggtagacctgcagctgaatgacctgggtgatgat
ggtgtgaggctgctgtgtaagaggctcagaaaacgtgcctgcaacctcagcatcctgcgg
ctggaccaggcctctctcagtgaccaggtgattaaagaactcaagactctggaggcaaag
aatccaaagctgctcatctccagcacatggaagccacatgtgatagtccctgctaagaac
atggatgaagaagaagtgagtgataacccaacctcattcaagcaggagcaacaacagcca
ggagataaacccatggaaccgccggagactgagattgacttctggggccctacaggatgt
gtggctactgagattgttgacagagagaggaacatgtaccgagtcccattgcccatggct
ggttcctaccactgtcccagtacaggactccactttgtggtgacaagggcagtgacaatc
gagattgaattctgtgcctggagccaatacctggacaagactcccttgcaacacagttac
atggtggttggacctctgtttgacatcaaagttgagcaaggagctgtgactgcagtgtac
ctccctcattttgtggctctccaagatggaaaggtggacacctccttgttccatgttgcc
cactttcaagaacatgggatggtcctagaaagcccagcaagagtggaagagcattacaca
gtattggaaagcccaagcttctccccaataggagttctactgagattgattcctgctgtt
cgacaattcatccccatcaattccatcacactgatctactatcacttctatgacaaggat
gtcacctttcacctttacctggtccccaatgactgcactattcggaaggccattgatgat
gaagaaatgaagtttcagtttgttcgcataaacaagccacccccagtacgtgctctttat
gttggttcccactatatcctgtctggctccaaaaaggtggaaattatcccaaaggaactg
gaactgtgttaccgaagcccaggggaatcccagctcttctctgagatctacgttggacac
atggattcagggtttaagctgaaaatcagggagaagaggcacatgaatcttgtatgggag
gccttgctgaaaccaggagacatcagacatgcaccatgcagggtttctccagcacccaaa
gatgctccttccatgctacactttgtggaccagcatcgggagcagctggtggcccgagtg
acatcagtggactctctattagataagctgcatagccaggtgctgagtgaagattcctat
gaggcagtgagggctgagaccacaaaccaagacaagatgaggaagctcttcagcttcagc
ccatcctggagtcaagcctgcaaagaccaattctaccaagctctgaaggagacccaccct
cacctggtcatggaccactttgaaaagtctggtggggtctctttgggatcctga
DBGET
integrated database retrieval system
