Arvicanthis niloticus (African grass rat): 117711427
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Entry
117711427 CDS
T08817
Symbol
Rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04015
Rap1 signaling pathway
anu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
117711427 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117711427 (Rapgef6)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117711427
NCBI-ProteinID:
XP_034362955
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All DBs
Position
6:complement(66591455..66761814)
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AA seq
1613 aa
AA seq
DB search
MNSPVDPGARQALRKKPPERTPEDLNIIYSYLHGMEILSNLREHQLRLMSTRARYERYSG
NQMLFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARHSRRRFRKVNYKGERQTITDGVDVNNYLSLPADLTKMHLTDSPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEEEEI
DRTDPLQGRDLVRECLEKEPADKTDDDVEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEISHPDGKIENLFMGNSFGIVPTLDKQYMRGVVR
TRVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLETPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLTGGSEKGFGVFVEEVEPCSKAADVGLKRGDQIMEVNGQNFENITFAKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGIPHIPKIAEKKSNRHSIQDVPGDIEQAPQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPTDIPDQVIRIFKADQQSCYIIISKDTTAKEVVCQA
VQEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELLKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNIHL
KQFEDIVNQETFWVASEILSESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
PVARLRGTWEKLPSKYEKHLHDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRHIIRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDIDTDEEKFQMMSL
QWEPAYGTLTKNLTEKRSAKSSEMSPVPLRSVGQTAKVHLHQPHRVSQVLQVPAVNLHPI
RKRGQAKDHVPSSGLPQKGLGPTEEVSGKKHTEDTISVASSLHSSPPASPQSSPRKGCTL
TPSSKCDNLSDSSHSEISSRSSIVSNGSVDSMSAAGQDERCSTHSLVIPEPTGALEKTDH
PSGISDHSQLAHGWMLSKPSLIKGVAVSSSLSSEEMSHDHVLLEAADSGRGSWTSCSSSS
HDNFQSLQNQKSWDFLNSYRHMHLDDPIAEVETTDCEPCACPKGCSRSCGQCKGSLETNQ
LRQSWASSSSLSDTCEPNYGTVKRRVLESAPTEAPDGLELRDTTDPVYKTVTSSTDKGLI
VYCVTSPKKGDRYREPPPTPPGYLGMSLADLKEGPHPHLKPPDYSVAVQRSKMMLNSLSR
LPPAPPSSHASAWVPSRTGSQPQRHSLQPSHPKLADVADADSEADENEQVSAV
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggatcccggcgctcggcaggcactgaggaagaagccaccggagcgg
actcctgaggacttaaatattatttattcttatctccatggaatggaaatactatcaaac
ctcagggagcatcagcttaggttaatgtctacaagagcacgctatgagagatacagtggc
aatcaaatgcttttttgttcagaaactattgccagatgttggtatatcctgctttctgga
tctgtacttgtaaaagattctatggtccttcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagaaccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattttacaaagagaaattcctgccagacactctcgacga
aggtttcggaaagttaactataaaggagaacgccaaaccataaccgatggggtggatgtt
aataactacctttcgcttccagctgatcttaccaagatgcacctcacagacagccctcat
ccacaggtgactcatgtgtcttctagtcagtctggctgtagcattgccagtgactctggg
agcagcagtttatctgatatctaccaggctacagagagtgaagtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaggatgaagaagaggaggaagaagagatt
gatcgaacagatccactgcagggtcgtgatcttgttcgggagtgtcttgaaaaggaacct
gcagacaaaactgatgatgatgttgaacagttacttgagttcatgcaccagctgcctgcc
tttgcgaatatgaccatgtctgtaaggagagagctctgctctgtcatgatttttgaagta
gtggagcaggctggggctattattcttgaagatgggcaagagcttgactcatggtatgtc
attttaaatggcactgtagaaattagtcatccagatgggaaaattgaaaatctcttcatg
ggaaatagttttggaattgttcccactctggataagcagtacatgcgaggagttgtcaga
accagagtcgatgactgtcagtttgtctgcatagcccaacaggactattggagaatttta
aatcatgtggaaaaaaatacccataaagttgaggaagagggggaaattgtcatggtccat
gagcatcgtgaactagaccggagtggaaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttgatagaagaacattctattgtggacccaacatatata
gaagatttcctgttaacttataggacatttcttgaaactcctttggatgttgggatcaag
cttttggaatggtttaaaattgacagcttaagagataaggtgacccggattgtactctta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgctttctagaa
gaatttgaaaaaaatttggaagatacaaaaatgaatggtcacctcagattattgaatatt
gcctgtgctgcaaaggctaagtggaggcaagttgtactgcagaaagcatcccgtgagtcc
ccgctgcactttagccttactggaggcagtgagaagggatttggtgtctttgttgaagaa
gtggaaccttgtagcaaagctgctgatgtaggactgaaacggggtgatcagataatggaa
gtcaatggacaaaactttgagaatattacatttgctaaagcccttgaaattttgaggaat
aatactcatcttgcacttactgtgaagaccaacatttttgtgttcaaagaattgctcagt
aggactgaacaggagaaatcgggtattcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccattcaattcaagatgtcccaggagatattgagcaggcaccacaggagaaagga
aataagaaaattaaagcaaataccgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagtatcttgcctccaaaactatttagtgacggaggcctgagtcag
tcacaagatgacagtattgtgggaaccaggcactgtaggcacagcctggctataatgcca
atccctggaacactctcgtccagcagcccagatctcttacagccgaccactagcatgttg
gacttttccaatcctacagatattcctgatcaagttataagaattttcaaagcagatcaa
caaagttgctacattatcatcagtaaagataccacagctaaagaagtggtctgccaagct
gtacaggaatttggtttgactggtgcatctgacacatactctctctgtgaagtttctgtt
actcctgagggtgttataaagcagagaagacttccggaccagttctccaagttagctgat
agaattcaactcaatggaaggtattacctaaaaaataatatggaaacagaaacattgtgt
tctgatgaagatgcccaggaactacttaaggaaagccagctatccatgctgcaactcagc
accatcgaggttgccacccagctgtcaatgagagacttcgatttgtttcgtaatattgag
cctactgaatacattgatgatctttttaaattagattctaaaacaggaaatattcactta
aaacaatttgaggatattgtaaaccaagagacattctgggttgcctcagagatcttaagt
gagtcaaatcagctgaaaagaatgaagattattaaacattttattaaaattgcccttcat
tgccgagaatgcaagaatttcaattccatgtttgcaataataagtggcttgaacctggca
ccagtagcacgactcagaggcacttgggaaaagttaccaagcaaatatgagaaacatctc
catgatctacaagacctttttgatccatctagaaatatggcaaaatacagaaatattctt
agtagtcaaagcatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acattcctccatgaaggaaatgactccaaagtagatggcttagtaaacttcgagaagcta
agaatgattgccaaggaaatccgtcatattattcgaatgacttctgctaacatggaccct
gccatgatgttccgacagaggaagaagaggtggcggagtctggggtcattaagtcaaggc
agcacaaattctaacatgctggatgtccagggaggtgctcacaagaaaagagcacgccgc
agctcactgctaaatgccaagaaactgtatgaagatgcccaaatggcaaggaaagtgaaa
cagtatctttctagtctagacatagacacagatgaggagaaattccagatgatgtcacta
cagtgggaacctgcgtatggtaccttgacaaagaacttaactgagaaacggtcagccaaa
tcatctgagatgtctcctgtgccattgaggtcagttggccaaacagctaaagtccacttg
catcagccacacagagtgagccaagtgcttcaggtgccagcagttaacttgcaccccatc
cggaagagaggacaagccaaagaccatgtgccgagttcaggtttacctcagaaaggttta
ggaccaactgaagaagtgagtggtaagaaacacacagaagacactatttctgtagcatct
tctctccactctagccctcctgcatctcctcaaagctcccctcgcaaaggttgtacactc
acaccatcaagtaaatgtgacaacttgtctgactccagccacagtgaaatctcctctcgg
tccagcattgtgagcaatggttctgtggactccatgtctgcagctgggcaggatgaacgc
tgttccacccacagcctcgtaattcctgagcccacgggggcattggaaaagacagatcac
ccttcagggatctcagaccacagtcagcttgctcacggctggatgctgtcaaagccgtct
cttatcaagggtgtagctgtctcgtcttctctgagcagcgaagagatgtctcatgaccat
gttctgctggaagcagctgacagtggtcggggaagttggacttcctgttccagcagctcc
catgacaacttccaaagccttcaaaatcaaaaaagctgggactttctgaattcttacaga
catatgcatttagatgaccctattgctgaagttgagaccactgactgtgagccctgtgct
tgtcctaaaggctgctcaagaagttgtggccagtgcaaaggcagcctagagacgaaccag
ctgaggcagagttgggcctcatccagttcactgtctgacacatgtgaaccaaactatggg
acagttaagcggagggtattggaaagtgcaccaacagaggcgcctgatggcttggagctg
agggataccactgaccctgtttataaaactgtcacttccagtacagacaagggcttgatt
gtgtactgtgtcacctcacccaagaaaggtgataggtatagggagccacctcccactcct
ccaggatatctgggaatgtctttagcggacctaaaggaaggaccccacccgcacctaaaa
cctccagactatagtgtggcagtacagagatcaaagatgatgcttaacagcctgtctaga
ctgccgccagctcctcccagtagccacgcctcggcctgggttccctcgaggaccggatcc
cagcctcagaggcatagcttgcagccgtcccatcccaaactagcagatgtggctgatgca
gatagcgaagcagatgaaaatgagcaggtgtcagcagtctag
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integrated database retrieval system
