KEGG   Arvicanthis niloticus (African grass rat): 117711719
Entry
117711719         CDS       T08817                                 
Symbol
Traf4
Name
(RefSeq) TNF receptor-associated factor 4
  KO
K09848  TNF receptor-associated factor 4
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04657  IL-17 signaling pathway
anu05200  Pathways in cancer
anu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:anu00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    117711719 (Traf4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117711719 (Traf4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    117711719 (Traf4)
SSDB
Motif
Pfam: zf-TRAF TRAF-mep_MATH MATH_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-TRAF_2 zf-Nse zf-RING_5 zf-RING_2 zf-RING_6 TRAF3_RING zf-C3HC4_4 Sina_ZnF zf-rbx1 MATH GP88
Other DBs
NCBI-GeneID: 117711719
NCBI-ProteinID: XP_034363436
LinkDB
Position
6:43688969..43694979
AA seq 470 aa
MPGFDYKFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLP
LDYAKIYPDPELEVQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAK
LSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGVCPQESVYCENKCGARMMRRLL
AQHATSECPKRTQPCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPAHLK
DSCSTAFVLCPFKESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELE
ELSIGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEG
THLSIYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKP
GTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRASVELPRKILS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcccggcttcgactacaagtttctggagaagcctaagcggcggctgctgtgcccactg
tgcgggaaacccatgcgcgagcctgtgcaggtgtctacttgcggccaccgcttctgcgac
acctgcctgcaggagttcctcagtgaaggagtcttcaaatgccctgaggaccagcttcct
ctggactatgccaagatctatcccgacccggagctggaggtccaggtgttaggcttggct
atccgctgcatccacagtgaggagggctgccgttggagtgggccacttcgtcatctgcag
ggccacttgaacacctgcagcttcaatgtcgtcccctgcccgaatcgctgcccggccaag
ctgagccggcgtgacctgcccgcccacctgcagcacgactgccccaagcgccgcctcaag
tgtgaattttgcggctgtgacttcagtggggaggcctacgagagtcacgagggcgtgtgc
ccccaagagagtgtgtactgtgagaacaagtgtggggcccgcatgatgcggcgactgttg
gcccagcacgccacttctgagtgccccaagcgcacccagccctgtgcctactgtaccaag
gagtttgtttatgacactatccagagccaccagtaccagtgcccacgcctgcctgttccc
tgccccaaccagtgtggagtgggcactgtggctcgggaggacctgccggcccacctgaag
gacagctgcagcactgcctttgtgctctgccctttcaaagagtctggctgcaagcacagg
tgccctaagctggcaatgggacgtcacgtggaggagagtgtgaagccacatctggctatg
atgtgtgctctggtgagccggcagcggcaagagctgcaggagctgcggcgagagctggaa
gagctgtccataggcagtgacggagtgctcatctggaagatcggcagctatgggcggcgg
ctacaagaggccaaggccaagcctaacctggagtgcttcagcccagccttctacacacat
aagtacggctacaagctgcaggtgtctgcattccttaacggcaacggcagcggggagggc
acacacctctccatctacatccgtgtgttgccaggcgcctttgacaatctcctcgagtgg
ccttttgcccgccgggtcaccttctccctgctggatcagagtgacccaggtttggctaag
ccacagcatgtcactgagaccttccaccctgatccaaactggaagaacttccagaagccc
ggcacttggcgaggctccctggatgagagctccctgggcttcggctaccccaaattcatt
tctcaccaggacatccgaaagcggaattacgtgcgggatgatgcagtcttcatccgtgcc
tctgtcgaactgccccggaagatcctcagctga

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