Arvicanthis niloticus (African grass rat): 117713564
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Entry
117713564 CDS
T08817
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117713564 (Iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
anu01007
]
117713564 (Iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anu03016
]
117713564 (Iars1)
Enzymes [BR:
anu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
117713564 (Iars1)
Amino acid related enzymes [BR:
anu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117713564 (Iars1)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117713564 (Iars1)
Prokaryotic type
Other AARSs
117713564 (Iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
117713564
NCBI-ProteinID:
XP_034365707
LinkDB
All DBs
Position
8:complement(13739424..13785732)
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AA seq
1262 aa
AA seq
DB search
MVQQVPENISFPAEEEKILEFWSKHNCFQECLKQSKLRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPDDVAKMGISEYNRQC
RAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNP
EIQYVKIKDVAREKLFILMEARLSALYKQESDYEILERFPGSSLKGKKYKPLFDYFIKYK
ENGAFAVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSAPVCPVDASGCFTE
EVTHFVGQYVKDADKNIIRMLKEQGRLLVASTFTHSYPFCWRSDTPLIYKSVPSWFVRVE
HMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDFEEVVC
IGSVAELEELSGTKISDLHRESIDHLTIPSRCGKGPLRRVSEVFDCWFESGSMPYAQVHY
PFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQK
MSKRKKNYPDPVSIINKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVFRLHKEEGVEFLYNEHMVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVV
PRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKLLIDPASVRDKDTLSIHYLMLPRVREELIDKKTENAVSRMQSVIELGRVVRDRKT
IPIKYPLKEIVVIHQDPEALEDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKAVMMAIKQLNNEELEQFQKSGSILVEGHELHEEDIRLMYTFDQATGGTAQ
YEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGR
YLNNVIESHTDFIFATIKAPLKPYPVPTSDNILIQEQTQLKGSELEVTLTRGSCVPGPTC
AYVNLNICVNGTEQGGVLLLENPKGDDQLSLVKLKSAITSIFGVKNTKLSVFHGETEIQN
QTDLLSLSGRTLCVTAGAAPSPVSSPGALLCQYINLQLLNAEPQECLTGTVGTLLLENPL
GQNGLTHQGLVCEAAKVFGLRGRRLKLFLNETQTQEITEDIPMKTLNMKTVYVSVLPTTA
DG
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacatcagttttcctgctgaagaagaaaaaatcttggag
ttctggtccaaacataactgtttccaggaatgcctaaagcagtcaaaactcaggccaaag
tttaccttctatgatgggcctccctttgctactggactgcctcactatggacacatactc
gcggggacaatcaaagatatcgttacgagatacgctcaccagagcgggtttcacgttgac
agaagatttgggtgggattgtcacggcttacctgtggagtatgaaattgataagacactg
gggatcaaagggccggacgatgtggccaaaatggggatttcggagtacaacaggcagtgc
cgagcaattgtgatgaggtactccactgagtggaagtctactgttaccagactgggccgg
tggatcgactttgacaatgactacaaaacactgtacccacaattcatggaatcagtctgg
tgggtcttcaagcagctgtatgacaaaggcctcgtgtacagaggcgtgaaagtcatgccc
ttctccaccgcctgcggcactccactctccaacttcgaatccaaccagaattacaaggat
gttcaggatccttcagtgtttgtaacattccctttggaggaagatgaaaatacatcctta
gttgcttggacaaccactccttggactctacccagtaaccttgcgctatgtgtcaatcca
gaaatacagtatgtgaagatcaaagacgttgccagggaaaaattgttcattttaatggaa
gccagattatcggccctctataaacaagaaagtgactatgagatccttgagaggtttcct
ggctcctctctcaaaggcaaaaaatacaagccgttgtttgactactttatcaagtataag
gagaacggtgccttcgccgtgcttgttgaccactatgtgaaggatgaagaaggcacaggc
gttgttcaccaggctccttactttggcgctgatgatcatcgcgtctgtatggacttcaac
attattcagaaagactcagcccctgtttgtcctgtggatgcttcaggctgcttcacggag
gaagtgacacactttgtggggcagtatgtgaaggatgctgacaaaaatatcattaggatg
ttgaaggagcagggccggctgcttgtggcgagcaccttcactcacagctaccctttctgc
tggaggtcggacacgcccctcatatacaagtcagtgcccagctggtttgtgcgggtggag
cacatggtggaccagctactgaagaacaatgatctgtgttactgggtcccagagtttgtc
cgagaaaaacggtttggaaattggctgaaggaggcacgtgactgggcaatttccagaaac
agatactggggcacccccatcccactgtgggtcagtgaagactttgaggaggtagtgtgc
attggatcagtggcagagcttgaagaattgtcgggaacaaaaatctcagatctccacaga
gagagtattgaccacctgaccatcccatcccgatgcgggaaaggaccactgcgtcgagtc
tctgaggtgtttgactgctggttcgagagtggaagtatgccctatgcccaggttcattat
ccgttcgagagcaagcgcgagtttgaggatgcctttcctgcagacttcattgctgaaggc
atcgatcaaaccagaggatggttttacaccctgcttgtgctagccaccgccctctttgga
caaccacctttcaaaaatgtgattgtgaacggcctcatcttggcaagtgatggccaaaaa
atgagcaagcggaaaaagaactacccagatccagtttctatcatcaataagtatggggcc
gacgccctcaggttatatctgatcaattctcctgtggtaagagcagaaaacctgcgcttc
aaggaggaaggtgtgcgcgatgtcctcaaggatgtgctgctcccgtggtacaacgcttac
cgcttcttcatccagaacgtcttcaggctccacaaggaagaaggagtggagttcctgtac
aatgagcacatggtccgagaaagccctaacatcactgaccggtggattctgtccttcatg
cagtcgctcattgggttctttgagaccgaaatggcagcttacaggctctacactgtggta
cctcgcctggtcaagtttgtagatattctgaccaactggtatgtccgaatgaacaggaga
agattaaagggtgagaatgggatggaagactgtgttatggctctggagacactcttcagt
gtcctgctttctctgtgcagactgatggctccttacacaccctttcttactgaactgatg
taccagaatctaaagctgctgattgaccctgcttctgtccgggacaaggacacactcagc
atccactacctcatgttgcctcgtgttcgagaggagctgattgacaagaaaactgagaat
gccgtgtctaggatgcagtccgtgattgagcttgggagagtagtacgagaccggaaaacc
attccaataaagtatcctttgaaggaaattgtggtcatccaccaagacccagaagctctt
gaggatatcaagtccttggagaagtatatcattgaggaattaaatgttcgaaaagttaca
ctgtctactgataaaaacaagtatggtattcgactaagggcggaaccagatcacatggtc
cttgggaagcgtctgaagggagccttcaaagcagtgatgatggccataaagcagctgaac
aatgaggagctggagcagtttcagaagagcggaagcattcttgtggaaggccacgaattg
cacgaagaagatattcgcctcatgtacacctttgaccaggccacgggagggactgcacag
tatgaagcacactctgatgctcaggctttagttctcttagatgtcacacctgaccagtca
atggtagatgagggcatggctcgggaagtcatcaatcgcatccagaagcttcgcaagaag
tgcaatctggttccaacggatgaaataacagtttactataatgcaaaatctgaaggaaga
tacttgaataatgtcattgaaagccacaccgacttcatatttgccaccattaaagctccc
ttgaagccatatccagttcctacatcggataatatccttattcaagaacaaactcagtta
aaggggtccgagctggaagtcacactcaccagaggatcgtgtgtgcctggccctacctgt
gcttatgtgaaccttaacatctgtgttaacggcaccgagcaaggcggagtgttgctcctg
gagaatccaaaaggcgatgaccagctgagcctcgtgaagctgaagagcgccattaccagt
atattcggtgttaaaaacacaaagctgtcagtcttccatggtgaaacagaaatacagaac
caaactgacttgctgagcctcagtgggaggacactgtgtgtgactgcaggagcagccccg
tctcctgtcagcagccccggcgcccttctgtgtcagtacatcaacctgcagctcctgaac
gcagagccacaagagtgtttaacaggaactgtgggcaccctcctgcttgaaaacccactc
ggacagaatggactcacccaccaagggcttgtgtgtgaagcagccaaggtgtttggactg
cggggcaggaggctaaagctgttcctgaatgagactcagacacaagaaattacagaagat
atcccaatgaagactttgaatatgaagactgtgtatgtttctgtcttgccaacgactgca
gatggctaa
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