Arvicanthis niloticus (African grass rat): 117713841
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Entry
117713841 CDS
T08817
Symbol
Kcnc3
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-gated potassium channel KCNC3
KO
K04889
potassium voltage-gated channel Shaw-related subfamily C member 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117713841 (Kcnc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117713841 (Kcnc3)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
117713841 (Kcnc3)
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Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
BTB_3
Motif
Other DBs
NCBI-GeneID:
117713841
NCBI-ProteinID:
XP_034366234
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Position
1:18272117..18287478
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AA seq
854 aa
AA seq
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MFSSVCVWSFRGRQGTGKQQPQPAPAPQPPESSPPPLPPPPQQQCAQPGTAASPAGAPLS
YGPGGRRAEPCPGLPAVAMGRHGGGGGDSGKIVINVGGVRHETYRSTLRTLPGTRLAGLT
EPEAAARFDYDPGTDEFFFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEEELGFWGIDE
TDVEACCWMTYRQHRDAEEALDSFEAPDSSANANANAGGTHDAGLDDEAGAGGGGLDGAG
GELKRLCFQDAGGGAGGPAGGAGGAGGTWWRRWQPRVWALFEDPYSSRAARYVAFASLFF
ILISITTFCLETHEGFIHISNKTVTQASPIPGAPPENITNVEVETEPFLTYVEGVCVVWF
TFEFLMRVTFCPDKVEFLKSSLNIIDCVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFV
RILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPDDI
LGSNHTYFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIV
NNFGMYYSLAMAKQKLPKKKNKHIPRPPQPGSPNYCKPDPPPPPPPHPHHGSGGISPPPP
ITPPSMGVTVAGAYPPGPHTHPGLLRGGAGGLGIMGLPPLPAPGEPCPLAQEEVIETNRA
GSDLGVLEEGVDPRPNGDPAAAALAHEDCPAIDQPAMSPEDKSPITPGSRGRYSRDRACF
LVTDYAPSPDGSIRKATGAPPLPPHAGVSQAPQASCPTSTPTQQPGYPPSGRAPSPPGSC
HRLRPRETLGFPLSLPPRLREVPQPEQHCGPERGVLAPRAPRHPPWLSPGHAPSSPDPAL
HPLALSSPLWGDWG
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctcagtgtgcgtctggtcgttccgcgggcgccaggggaccggcaagcagcag
cctcagccggcgccagcgccgcagccgcctgagtcctcaccgcctcctctgcctccgccg
ccgcagcagcagtgcgctcaacccggcaccgccgcctccccggcgggtgccccgctttcc
tacgggcctgggggccggcgcgccgagccatgccccgggctgccggcggtggccatgggg
cggcacggcggcggcggcggcgacagcggtaagatcgtgatcaacgtgggcggcgtgcgc
catgagacgtaccgctccacgttgcgcaccctgccggggacccggctggccgggctgacc
gagcccgaggcggccgcacgctttgactacgacccgggcacggacgagttcttcttcgac
cgtcacccgggcgtcttcgcctacgtgctcaactactaccgcaccggcaagctgcactgc
ccggccgacgtgtgcgggccgctcttcgaggaggagctgggcttctggggcatcgacgag
acggacgtggaggcctgctgctggatgacctaccgccagcaccgtgacgccgaggaggca
ctggactcattcgaggccccggactcctcggccaacgccaacgccaacgccggaggcacc
cacgatgcgggcctggacgacgaggcgggcgcaggaggcggcggcctggacggggcaggc
ggcgagctcaagcgtctgtgttttcaggacgcgggcggaggtgccggaggacctgccggg
ggcgcgggcggcgcgggcggcacgtggtggagacgctggcagccccgtgtttgggcgctt
tttgaggacccctactcgtcgcgggccgccaggtatgtggccttcgcctccctgttcttt
atcctcatctccatcaccaccttctgcctggagacacacgagggcttcatccacatcagc
aacaagacggtgacgcaggcctccccaatccctggggctcccccggagaatatcaccaat
gtggaggtggagaccgaaccgtttttgacctacgtggaaggcgtgtgtgtggtctggttc
acctttgagtttctcatgcgggtcaccttctgcccggataaggtggagtttctcaaaagc
agtctgaacatcattgactgcgtggccatcctgcccttctacttggaagtgggcctgtca
ggtctcagctccaaagctgccaaggacgtgctgggcttcctgcgagtcgtccgctttgtt
cgcatccttcgtatcttcaagctgacccgtcacttcgtggggctacgtgtgctgggccac
acgctccgggccagcaccaacgagttcttgttactcattatcttcctggctctgggggtt
ctcatctttgccaccatgatctactatgctgagcgcatcggagccgaccctgacgacatc
ctgggctccaaccacacctacttcaaaaacatccccatcggcttctggtgggctgtggtt
accatgaccaccctgggctatggagacatgtatcccaagacatggtcggggatgctggtc
ggggcactgtgtgccctggctggtgtgctgaccattgccatgcccgtgcccgtcatcgtg
aacaatttcggcatgtactattcactggctatggccaagcagaaattgccaaagaagaaa
aacaaacatatccccaggcccccgcagcctggctcacccaactactgcaagcccgatccc
ccgcctccgcccccaccacacccccaccacggcagcggtggcatcagcccgcctccgccc
atcacccctccttccatgggggtgactgtggccggggcctacccacctggaccccacacg
caccccgggctgctcaggggtggtgctgggggtctgggaatcatggggttgcctcctctg
ccagcccctggcgagccctgcccactggctcaagaagaggtgattgaaaccaacagggca
ggcagtgacttgggtgtcctggaggaaggagtggaccctcgtcccaatggagaccctgca
gcagctgcactggcccatgaggactgccccgccattgaccagccagccatgtctccagaa
gacaagagcccgatcactcccggaagccggggtcgctacagccgggatcgagcttgcttc
cttgtcacagactatgccccttccccggatggctccatccgaaaagccactggtgctccc
ccactgcccccccatgctggcgtaagccaggccccccaagcttcttgcccgacctcaacg
ccaacgcagcagcctggatatccccctagtggacgagccccttcccccccaggctcttgt
caccgcctgagacctcgcgagaccctcgggttccccctgtcccttccccccaggttacga
gaagtcccgcagcctgagcagcattgtgggcctgagcggggtgtccttgcgcctcgcgcc
cctcgccaccccccctggctctccccgggccacgcgccgagctcccccgaccctgccctc
catcctctagcgctgtcctcccctctgtggggggactgggggtga
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