Arvicanthis niloticus (African grass rat): 117714750
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Entry
117714750 CDS
T08817
Symbol
Phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117714750 (Phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117714750 (Phc1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
117714750 (Phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
117714750
NCBI-ProteinID:
XP_034367248
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All DBs
Position
9:complement(60210082..60231837)
Genome browser
AA seq
1039 aa
AA seq
DB search
MFPQPPRRVQRPGFMGLESERHSWAPWNAVMETESEQNSSSTNGSSSSGASSRPQIAQMS
LYERQAVQALQALQRQPNAAQYFHQFMLQQQLSNAQLHSLAAVQQATIAASRQASSPNSS
TAQQQTATTQASINLATTSAAQLISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMY
LRPQLGNLLQVNRTLGRNVPLASQLILMPNGAVAAVQQEVPPAQSPGVHADADQVQNLAV
RNQQASAQGPQMPGSTQKAISAGASPVSGLSQASSQALAVAQASSGASGQSLNLSHTGGG
SGNGLPGTAGPGGGGQAPGGLGQLPSSGLAGGSCPRKGTGVVQPLPAAQTVTVSQGSQTE
AENAAAKKAEADGSGQQSVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQ
KQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQQQQQQQQATTL
TAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPEPTPKPPIPIQSKPPVAPI
KPPQLGAAKMSATQQPPPHIPVQVVGTRQPGTAQAQALGLAQLTAAVPTSRGMPGAVQPG
QAHLASSPPSSQAPGALQECPPALATGMTLAPVQGTAHVVKGGPTASSPVVAQVPAAFYM
QSVHLPGKAQTLAVKRKAESEEERDDLSALGSVLPTKASPAADSPKVIEEKNSLGEKAEP
LASLNANPPNSDLVALAPTQSAPPPTLALVSRQMGDSKPPQAIVKPQILTHIIEGFVIQE
GAEPFPVGCSQFLKETEKPLQAGLPTGLNESQSSGPLGGDSPSVELDKKANLLKCEYCGK
YAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKMKEFQEASYARVRRRGPRRSSSDI
ARAKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGSLPVRAGHGERDLGNTITTPSTPEL
QGINPMFLSSNASQWSVEEVCEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMN
IKLGPALKICAKINVLKET
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcagccacctcggcgtgtgcaacgcccaggattcatggggcttgagtcagaa
cgccattcttgggcaccctggaacgctgtcatggaaacggagagcgagcagaactctagc
tccaccaatggaagttccagctcaggggccagctctcggccccagatagcacagatgtcc
ctgtatgaacggcaagcagtgcaggctctgcaagcactgcagcggcaacctaatgcagct
cagtatttccaccagttcatgctccagcagcagctcagtaatgcccagctgcatagcctg
gcagctgttcagcaggctacaatcgctgccagtcgtcaggctagctccccaaacagcagc
actgcacagcagcagactgccaccacccaggcctcgatcaatttggcgacgacctcagcc
gctcagctcatcagccgatcccagagtgtgagctcccccagtgctaccaccctgactcag
tctgtgttactggggaacaccacttccccacctctcaaccagtcccaggcccagatgtat
ctgcggccacagctgggcaacctattgcaggttaaccggaccttgggccggaatgtgcct
ctagcctcccagctcatcctgatgcctaatggggcagtggctgcagtccagcaggaggtg
ccacccgctcagtctcctggagttcatgcagatgcagatcaggtgcagaacttggcagtg
aggaaccaacaggcctcagctcaaggaccccaaatgccaggctccactcagaaggccatc
tctgctggagcatctcctgtttctggcctctcccaggcttctagccaggccctagctgtg
gcacaggcttcttctggggcctcaggccagtcactcaaccttagtcacactggtggaggc
agtgggaatggcctcccaggcaccgcgggtccaggtggaggtggccaggcgcctgggggc
ttgggtcagttgccttcttcaggactggctggtggaagctgtccccggaagggcacagga
gtggtgcagcccttacctgcagctcaaacagtgactgtgagccagggaagccagacagag
gcagaaaatgcagcggccaagaaggcagaagcagatgggagtggccagcagagcgtgggc
atgaacctgactcggacagccacacctgcccccagccagacgcttattagctcagctaca
tacacacagatccagccccattcactgattcagcaacagcagcagattcatctccagcag
aagcaagtggtgatccagcagcagattgccatccaccaccagcaacagttccaacaccgc
cagtcccagctgcttcacacagctacacacctccagttggctcagcagcagcagcaacag
cagcagcagcagcagcagcagcagcaacaacaacaacagcagcagcaagcaacaaccctc
actgcccctcagccaccccaggtcccacctactcagcaggtcccaccttcccaatcgcaa
cagcaagcccagactctggtggtccaacccatgcttcagtcttctcccctatctcttcca
cctgaaccaacccccaaaccacccattcccattcagtccaaacctcctgtagctcctatc
aaacctcctcaactaggagctgctaagatgtcagctacacagcagccaccaccacatatc
cctgtgcaagttgtcggtactcggcagccaggtacagcccaggcacaggctttgggatta
gcacagctgacagctgctgtacctacttcccggggaatgccaggggcagtccagcctggc
caggcccatctggcctcctcgccaccttcatcacaggctcctggtgcacttcaagaatgt
cctcctgcattggccactgggatgactcttgctcctgtgcagggaacagcacatgtggta
aagggtgggcctacagcctcctctcctgttgtggcccaggttcctgctgctttctacatg
cagtcggtgcacctgccgggtaaagcccagaccttggctgtgaaacgcaaagcggagtct
gaggaggagagagatgacctctccgctttgggctctgtgcttcctacaaaggcctcacca
gcagcagacagcccgaaggtaatagaggagaagaacagtcttggagagaaagcagaaccg
ttggccagtttgaatgctaaccctccgaacagtgatctagtagccttggcccccacccag
tcagcaccaccacctactctggccttggtgtccagacagatgggtgactcaaaaccccca
caggccattgtgaagccccagattctcacacacatcatcgaaggctttgttatccaggaa
ggagctgagcctttcccggtgggatgttctcagttcctgaaagaaaccgagaagccacta
caggctggccttccaacagggctgaatgagagtcagtcaagtggccctttgggaggcgac
agcccctctgtagagttagataagaaggcaaatctcctcaagtgtgagtactgtgggaag
tacgccccagcagagcagtttcgaggctctaagaggttctgctccatgacgtgtgcaaag
aggtacaatgtgagctgtagccaccagttccgcttgaagaggaaaaaaatgaaagagttt
caggaagccagctatgcacgcgttcggaggcgtggaccccgccgcagctcctctgacatt
gctcgtgctaagatccagggcaagcgccatcggggtcaagaggactctagccggggctca
gataattccagctatgatgaagcactctccccaacatctcctgggtcactgccagtaaga
gctgggcacggagaacgagatctaggaaacaccataacaaccccatccacaccagagtta
cagggcatcaatcctatgttcttgtccagtaacgctagccagtggagcgtcgaggaggtc
tgcgagtttatcgcttctctgcaaggctgccaagagattgcagaagagtttcgttcccag
gagattgatggacaggcccttttattacttaaagaagaacatcttatgagtgccatgaac
atcaaattaggtcctgctcttaagatttgtgccaagatcaatgtcctcaaggagacttaa
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integrated database retrieval system
