KEGG   Arvicanthis niloticus (African grass rat): 117714794
Entry
117714794         CDS       T08817                                 
Symbol
Ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:anu03037]
    117714794 (Ift122)
Cilium and associated proteins [BR:anu03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   117714794 (Ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WDR55 Beta-prop_TEP1_2nd TPR_GEMI5 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd TPR_IF140-IFT172 Beta-prop_EML Beta-prop_WDR35_TULP_N TPR_IFT80_172 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 eIF2A B-prop_COPA_B_2nd TPR_7 WD40_MABP1-WDR62_1st TPR_COPA_B Beta-prop_IFT140_2nd BBS2_Mid Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 117714794
NCBI-ProteinID: XP_034367348
LinkDB
Position
9:53895984..53965471
AA seq 1183 aa
MRAVLTWRDKAEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEEKSVSKHKSSSKITCCSWTNDGQYLALGMANGIISIRNKNGEEKVKIERPGGSLSPIW
SICWNPSREEHNDILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILVGG
SDKQVSLFTKDGVRLETVGEQHSWVWTCRVKPDSNYVVVGCQDGTISFYQLVFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSDDS
ADMHYRVKEKIVKKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVI
GGPAGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLDRKMFKEAYQIACLGVTDTDWRELAMEALEGLEF
ETAKKAFTRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHE
NLALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHTK
AIEISGSHGWVDMLIDIARKLDKAEREPLLMCASYFKKLDSPGYAAETYLKIGDLKSLVQ
LYVDTKRWDEAFALGEKHPEFKDDIYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDMAQVDPAQKDVMLDKFHHFQHLAELYHGYQTI
HRYTEEPFSFDLPETLFNISKFLLHSLTKATPLGISKVNTLFTLAKQSKALGAYKLARHA
YDKLRGLQIPARIQKSIELGTLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFIFSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRHKREGKWRETSSNNSQTLRLD
ETIDSIGEDDPFTAKLSFEQGSSEFVPVVVNRSVLRSMSRRDVLIKRWPPPLQWQYFRSL
LPDASITMCPSCFQMFHSEDYELLVLQHACCPYCRRRIDDTGP
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgagggccgtgttgacgtggagagacaaagcggagcagtgtatctacgacctcgcattt
aagcctgatggaacgcaactgattctggctgcaggaaacagattgctggtttatgacacc
tcggatggcaccttacttcagcccctgaagggacacaaagatactgtgtactgtgtggca
tatgcaaaggatggcaaacgctttgcatccggatctgccgacaagagcatcattatctgg
acctcaaaactggaaggcattctgaagtacacgcacaatgactctatacagtgtgtctcc
tacaatcctgttacccaccagctggcatcttgctcctccagtgactttgggctgtggtct
cctgaggagaagtctgtctccaagcacaaatccagcagcaagatcacctgctgcagctgg
acaaacgatggtcagtacctggctctggggatggccaatggcatcatcagcatacggaac
aaaaatggtgaagagaaagtgaagatcgagcgtcctgggggctccctctccccaatatgg
tccatctgctggaacccgtcaagagaggaacataatgacatcctggctgtagctgactgg
ggacagaaactttccttctaccagctgagtggaaaacagattgggaaggatcgccccctg
aactttgacccctgttgcatcagctacttcactaaaggagagtacattttggtggggggt
tcagacaagcaggtgtctctcttcaccaaggatggagtgcggctggagacagtgggggaa
cagcactcctgggtgtggacctgtagagtgaagcctgactccaactatgtggtggtaggc
tgccaggacggcaccatttccttctaccagcttgtcttcagcacagtccacggactctat
aaggatcggtatgcctatagggacagcatgacagatgtcatcgtgcaacacctgatcaca
gagcagaaagttcggattaaatgcagagagcttgtcaagaaaattgccatctacaaaaat
cgattagctatccagctgccagagaagatcctcatctatgagctgtactctgatgactcg
gcagacatgcactaccgggtgaaggagaaaattgtcaagaagtttgagtgcaacctgctg
gtggtgtgtgctgaccacatcatcctgtgccaggagaaacggctacagtgcctgtccttc
agtggagtgaaggaaagggaatggcagatggagtctctcattcgctacatcaaggtgatc
ggtggccctgctggaagagaaggtctgttggtaggcctgaaaaacggccagatcctgaag
atctttgtggacaatctctttgctattgtcctgctgaagcaggccacagccgtgcgctgc
ttggacatgagtgcctcccggaacaagctggctgtggtggatgaaaatgacacatgcctg
gtgtatgacatccacacgaaggagctgctttttcaggaaccaaatgccaacagtgtggcc
tggaacacccagtgtgaggatatgctttgcttctccggaggaggttacctcaacatcaag
gccagcaccttcccagtgcaccagcagaagctgcagggctttgtggttggttacaacggc
tccaagatcttctgccttcatgtcttctccatgtctgctgtggaggtgccacagtctgca
ccgatgtaccagtaccttgataggaagatgttcaaagaagcataccagatcgcttgcttg
ggagtgacagacactgattggcgtgaactggccatggaagctctagaaggactagagttt
gaaactgccaagaaggccttcaccagagtccaggaccttcgataccttgagctgatcagc
agtattgaggagaggaagaagaggggagagaccaacaatgacctgtttctggcagatgtg
ttttcctaccaggggaagttccatgaagccgccaaactgtacaagaggagcgggcatgag
aacctcgccctcgacatgtatactgacctctgcatgtttgagtatgccaaggatttcctt
ggatctggagaccctaaagaaacaaagatgctcatcaccaagcaggccgactgggccagg
aacatcaacgagcccaaagctgcggtagagatgtacatctcggccggggagcacaccaag
gccatagagatcagcggcagccacggctgggttgacatgttgatagacattgctcggaag
ctggacaaggctgagcgggagcccttgctcatgtgtgcttcctactttaagaagctggac
agtcctggctatgctgctgagacctacctgaagatcggggacctcaagtctctggtacag
ctgtatgtggacaccaagcgctgggatgaggcctttgctttaggtgagaagcaccctgag
ttcaaggatgacatctatgtaccctatgcccagtggctagcagagaatgaccgctttgag
gaagcccagaaagccttccacaaggccgggaggcagggagaagcagtccgggtgctggag
cagctcacacacaatgccgtggtggagagcaggtttaatgacgctgcctattattactgg
atgctgtccatgcagtgcctcgacatggctcaagtagatcctgcccagaaggatgtgatg
cttgacaagtttcaccatttccagcacctggctgagctgtatcatggctatcaaaccatt
caccgatacacggaggagccattcagctttgatctccccgaaaccctcttcaacatctcc
aagttcttgctgcacagcctgaccaaggccacccccttgggcatctccaaagtgaataca
ctgttcacactggccaagcagagcaaggctctgggtgcttacaagctggcccggcatgcc
tatgacaagctacgggggctgcagatccccgccaggatccagaagtccattgagctgggt
accctgaccatccgctccaagcccttccatgacagtgaggagctggtgcccttgtgctac
cgctgttctaccaacaacccactgttgaacaaccttggcaacgtctgcatcaactgccgc
cagcccttcatcttctctgcctcttcctatgaggtgctgcacctggtggaattctacctg
gaagaggggatcactgatgaagaagctgttgccctcattgatctggaggcaccaagacac
aagagggagggcaaatggcgggagacctcaagcaacaattcccagacactgaggctggat
gagaccatagactccataggagaagatgacccatttacagccaagttgagctttgagcaa
ggcagctctgagtttgtgcctgtggtggtgaaccggtcggtactccgctccatgagccga
agggatgttctcatcaagcgctggcccccgccgctgcaatggcagtacttccgctcgctg
ctgcctgacgcctccatcaccatgtgcccctcctgcttccagatgttccattcagaggac
tatgagctgctggtgctccagcatgcctgctgcccttactgccgaaggcgtatcgacgac
actggcccgtga

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