Arvicanthis niloticus (African grass rat): 117715263
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Entry
117715263 CDS
T08817
Symbol
Plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
117715263 (Plxnd1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117715263
NCBI-ProteinID:
XP_034367886
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All DBs
Position
9:complement(53991904..54032178)
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AA seq
1927 aa
AA seq
DB search
MARRAAGGAPPSARAAAAVPLPPRSHSRGPGLLPLPLPLLLLLGAARAGALEIQRRFPSP
TPTNNFALDGTAGTVYLAAVNRLYQLSGANLSLEAEATVGPVPDSPLCHAPQLPQASCEH
PRRLTDNYNKILQLDPGQGLVVACGSIYQGLCQLRRRGNISALAVSFPPAAPTEEPVTVF
PSMLNVAANHPNASTVGLVLPPASGTGGSRLLVGATYTGYGSAFFPRNRSLEDHRFENTP
EIAIRSLDARGDLAKLFTFDLNPSDDNILKIKQGSKEQHKLGFVRAFLHPAVPPHSAQPY
AYLALNSEARAGDKDSQARSLLARICLPRGAGGDAKKLTESYIQVGLQCAGGAGRGDLYS
RLVSVFPAREQFFAVFERPQGAPGARNAPAALCSFRFADVQAAIRAARTACFVEPAPDVV
AVLDSVVQGTGPACESKRNIQLQPEQLDCGAAHLQHPLTILQPLRASPVFRAPGLTAVAV
ASANNYTAVFLGTATGRLLKISLNESMQVVSRRVLTVAYGEPVHHVMQFDPMDPGYLYLM
TSHQMARVKVAACEVHSTCGDCVGAADAYCGWCTLETRCTLQQDCTNSSQPHFWTSASEG
PSRCPAMTVLPSEIDVHQDYTGMILQISGSLPSLSGMEMACDYGNGVRTVARVPGPAYDH
QIAYCNLLPRAQFPSFPAGQDHVTVEMSVRVKGHNIVSANFTIYDCSRIGQVYPHTACTS
CLSTQWPCSWCIQLHSCVSNQSQCQDSPNPTSPQDCPQILPSPLAPVPTGGSQDILVPLT
KAAFFHGTPLECSFGLEEGFEAVWANESLVRCNQVVLHTTQKSQVFPLSLKLKGPPDRFL
DSPNPMTVVVYNCAMGSPDCSQCLGREDLGHLCVWNDGCRLRGPLQPLPGTCPAPEIRAI
EPLSGPLDGGTLLTIRGRNLGRRLSDVARGVWIGNVACEPLADRYTVSEEIVCATGPAPG
AFSDIVTVNVSKEGRSREQFSYVLPMVHSLEPSMGPKAGGTRITIHGSDLNVGSMLQVLV
NDTDLCTDLTRTATSITCTVPGGTLPSPVPVCVRFESRGCVRGNLTFWYMRNPVITAISP
GRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTFCKVLNSTLITCPSPGALRNASAP
VDFFINGRAYADEAAEELLDPAEAQRGSRFRLDYLPNPQFSTAKREKWIKHHPGEPLTLV
IHKEQDSLGLESHEYHIKIGQVSCDIQIISDRVIHCSVNESLGTAEGQLPITIQVGNFNQ
TIATLQLGGSETAIVVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQI
REEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSKTL
NSQGGSPPQETHPLLGEWNIPEHCRPSMEEGISLFSSLLNNKHFLIVFVHALEQQKDFAV
RDRCSLASLLTIALHGKLEYYTSIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNWM
SICMYGCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNL
NVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTESY
TLRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTLGRVKDLDTEKYFHLVL
PTDELVEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVK
YFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVI
AQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIQDMTPLSEQEMNAHLA
EESRKYQNEFNTNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALMENNI
YECYSEA
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcgccgcgggcggcgcaccccctagcgcccgggccgccgcggcagtcccc
ttgcctccgcgctctcactcgcggggccccggtctgctgccgctgccgctgcctctgctg
ttgctgcttggggcggcgcgggccggcgccttagagatccagcgccgcttcccctcgccc
acgcccaccaacaacttcgccctggacggcacggcgggcaccgtgtacctggcggcggtg
aaccgcctgtaccagctgtcgggtgccaacttgagcctggaggccgaggcgaccgtgggt
cccgtgccggacagcccgctgtgtcacgccccgcagctccctcaggcctcgtgcgagcac
ccgcggcgcctcaccgacaactacaacaaaatcctgcagttggacccaggccagggtctg
gtggtcgcgtgcggctccatctaccagggtctgtgccagctgaggcgccggggcaacatt
tcagccctggccgtgagcttcccgcctgctgcgccgaccgaagaaccggtcacagtgttc
cccagcatgctcaacgtggctgccaaccaccccaacgcgtccaccgtggggctggtgctg
ccaccggcctcgggcacggggggcagtcgtctgctcgtgggcgccacgtacaccggctac
ggcagcgctttcttcccgcgcaaccgtagcctagaagaccaccgcttcgagaacacgccc
gagatcgccatccgctccctggacgcgcgtggagacttggccaagctcttcaccttcgac
ctcaacccgtcggacgacaacatcctgaagatcaagcagggctccaaggagcagcacaag
ctgggcttcgtgcgtgccttcttgcacccggcggtgccaccgcacagcgcgcagccctac
gcgtacctggcgctcaacagcgaggcgcgtgcgggcgacaaggacagccaggcgcgcagc
ctgctggcgcgcatctgcctgccccgcggcgcgggtggcgacgccaagaagctcaccgag
tcctacatccaagtgggcttgcagtgcgcgggcggcgcgggccgtggcgacctctacagc
cgcctggtgtcggtcttccccgcgcgcgagcagttcttcgccgtcttcgagcggccccag
ggcgccccgggtgcccgcaacgccccggccgcgctctgctccttccgcttcgccgacgtg
caggccgccattcgtgcagcgcgcaccgcctgcttcgtggagccggcgcccgacgtggtg
gcggtgctggacagcgtggtgcagggcaccggaccggcctgcgagagcaaacgcaacata
cagctgcagccggagcagctggattgcggagcggcccacctgcagcacccactgaccatc
ctgcagccactgagggcatcgcccgtgttccgtgctccagggctcacagccgtggctgtg
gccagtgctaacaactacacggccgtctttctgggcaccgccacaggaaggctcctcaag
atcagcctgaacgagagcatgcaggtagtaagcaggcgggtgctgactgtggcctatggg
gagcccgtgcaccatgtcatgcaatttgaccccatggatcctggctacctgtacctgatg
acatcccaccagatggcccgagtgaaggtggcggcgtgtgaggtacactccacctgtggg
gactgtgtgggcgcagccgatgcctactgtggctggtgcactctggagacccggtgcaca
ctccagcaggattgcaccaactccagccagccgcatttctggaccagtgccagtgagggc
cccagccgctgccctgccatgacagtactgccctctgagattgatgtgcaccaggactac
acaggtatgatcttacagatctcaggaagcctgcccagcctcagcggtatggagatggct
tgtgactatggaaatggcgttcgaacagtggcccgagtacccggccccgcctatgatcat
cagattgcctattgcaatctcctgcccagagcccagttcccatccttccctgctggccag
gaccatgtgaccgttgagatgtctgtaagggtcaaaggacacaacattgtctcagccaat
ttcaccatctacgactgcagccgaattggacaagtctacccccatacagcctgtaccagc
tgcctgtcaacacagtggccttgctcctggtgcatccagctgcattcatgcgtctccaac
cagtctcagtgccaggactcaccaaaccccacgagtcctcaggactgtccccagatcctg
ccctcgcccctggcacctgtgcccacaggtggctctcaagacatcctggtgcctctgact
aaggccgccttcttccatggcacccccctcgagtgcagctttggcctggaggagggcttt
gaggccgtgtgggcgaatgagtcactggtccgctgcaaccaagtggtgctgcacacaact
cagaagagtcaggtgtttccactgagcctgaagctgaaggggccaccagaccgattccta
gacagccctaaccccatgacagttgtggtctacaattgtgctatgggtagccctgactgt
tcccagtgcctgggccgtgaggacctgggtcacctctgtgtttggaatgatggctgtcgt
ctgagagggcccctgcagccactccctggcacctgcccagcccctgaaatccgagcgatt
gagcctctgagtggccccttggacggtgggactttgctgaccatccgtggcaggaacctg
ggccgtcggctcagtgatgtggcacgtggtgtgtggattggcaatgtggcctgtgaaccc
ctggctgacagatacacagtttcagaggagatcgtgtgtgccacagggcccgccccaggg
gccttctcagacatagtaaccgtgaatgtctccaaggaaggcaggtctcgggaacagttc
tcctatgtgctgcccatggtccactcgctggagccttccatgggcccaaaggcagggggt
acaaggatcactattcacggcagtgacctcaatgtgggctccatgctccaggtcctggtg
aatgacacggacctctgcactgaccttacgcgcacggccaccagcatcacctgcactgtg
ccagggggcaccctgccctccccagtgcctgtgtgtgtgcgcttcgagagcaggggctgc
gtgcgtggaaacctcaccttctggtacatgcggaacccagtcatcacggccatcagccca
ggccgcagccccgtcagtggcggcagaaccatcactgtggctggcgaacgtttccacatg
gtgcagaacgtatcaatggctgtacaccacattggccgggagcccacgttctgcaaggtt
ctcaactccacgctcatcacctgcccgtctcctggagccctgagaaatgcgtcggcacct
gtagacttcttcatcaatggccgggcgtatgcagacgaggcggccgaggagctgctggac
cctgcagaggcacagcggggcagccggttccgcctagactacctccccaacccacagttc
tccacagccaagagggagaagtggatcaaacatcacccaggagagccgctcaccctcgtc
atccacaaggagcaagacagcctggggctcgagagccatgagtaccacatcaagattggc
caggtgtcctgcgacatccagatcatctcagacagagtcatccactgctcagtcaatgag
tcgctgggcacagctgaaggacagctgcccatcacaatccaggtggggaacttcaaccag
accatcgccactctgcagctgggaggcagcgagacggccattgtggtgtccatcgtcatt
tgcagtgtcctgttgctgctgtctgtggttgctctgttcgtcttctgcaccaagagccgc
cgtgccgagcgctactggcagaagaccctgctgcagatggaagagatggagtctcagatc
cgagaggagatccgcaaaggctttgcggagctgcagacagacatgacggacctcaccaag
gagctgaaccgcagccagggcatccccttcttagagtacaagcactttgtgactcgtacc
ttctttcccaagtgctcttccctctatgaggagcgatatgtgctgccctcgaagaccctc
aactcccaaggcggctccccaccacaggaaacccacccactgctgggagagtggaacatc
cctgaacactgtcggcccagcatggaggaggggatcagcctgttctcctcgctgctcaac
aacaagcacttccttatcgtctttgttcatgctctggagcagcagaaggacttcgctgtg
cgtgacaggtgcagcctggcatccctgctgaccatcgccctgcacggcaagctggaatac
tacacgagcatcatgaaagagctgctggtggatctcattgacgcctcagcggccaagaat
cccaagctcatgctgaggcgcacggagtctgtggtggagaagatgctcaccaactggatg
tccatctgcatgtatggctgcctgagggaaacagtaggtgagccgttcttcctgctgctg
tgcgccatcaagcagcagatcaacaaaggttccatcgacgccatcacaggcaaagcccgc
tacacacttaatgaggagtggctgctgagggagaacattgaggccaagccccggaacctg
aacgtgtccttccagggctgtggtatggactccctgagtgtgcgggccatggacactgac
acgctgacgcaggtgaaggagaagatcctggaagccttctgcaagaatgtaccctactca
cagtggccacgggcggaggacgtggacctcgaatggtttgcctcaagcaccgagagctac
accctccgggacctggatgacacgtcagtggtagaggacggccgtaagaaactgaacacg
ctggcccactataagatacctgagggcgcctccctagccatgagcctcacggacaagaag
gacaataccctgggccgagtgaaagacttggacacagaaaagtatttccatttggtgctg
cccacggatgagctggtagaacctaagaaatctcaccgacagagccatcgcaagaaagtg
ttgccagagatctacctgacccgtctgctgtccaccaagggcacgctgcagaagttcctg
gatgacctgtttaaggctatcctgagcatccgagaggacaagcccccgctggctgtcaag
tatttctttgacttcctagaggaacaggcagagaagagaggcatctctgaccctgacacc
ctgcacatctggaagaccaatagccttcccctgcgcttctgggtgaacatcttaaagaat
ccccagtttgtcttcgacatagagaagacagatcacatcgatgcctgcctgtctgtcatc
gctcaggccttcatcgatgcctgctccatctctgacctgcagctgggcaaggactcaccc
accaacaagcttctatatgcgaaggagattcccgagtaccggaagatagtacaacgctat
tacaaacagatccaggacatgacaccactcagcgagcaggaaatgaacgcacacctggcc
gaggagtctcggaaataccagaatgagttcaacacaaacgtggccatggctgagatctat
aaatatgctaagaggtatcgcccacagatcatggctgccctggaagccaaccccactgcc
cgcaggacccagctacagcacaagtttgaacaggtggtggctctgatggaaaacaatatc
tatgagtgttacagcgaggcctga
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