Arvicanthis niloticus (African grass rat): 117715411
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Entry
117715411 CDS
T08817
Symbol
Cd4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03250
Viral life cycle - HIV-1
anu03260
Virion - Human immunodeficiency virus
anu04060
Cytokine-cytokine receptor interaction
anu04514
Cell adhesion molecules
anu04612
Antigen processing and presentation
anu04640
Hematopoietic cell lineage
anu04658
Th1 and Th2 cell differentiation
anu04659
Th17 cell differentiation
anu04660
T cell receptor signaling pathway
anu05135
Yersinia infection
anu05166
Human T-cell leukemia virus 1 infection
anu05170
Human immunodeficiency virus 1 infection
anu05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
anu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117715411 (Cd4)
03260 Virion - Human immunodeficiency virus
117715411 (Cd4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117715411 (Cd4)
04514 Cell adhesion molecules
117715411 (Cd4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117715411 (Cd4)
04612 Antigen processing and presentation
117715411 (Cd4)
04660 T cell receptor signaling pathway
117715411 (Cd4)
04658 Th1 and Th2 cell differentiation
117715411 (Cd4)
04659 Th17 cell differentiation
117715411 (Cd4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
117715411 (Cd4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117715411 (Cd4)
05170 Human immunodeficiency virus 1 infection
117715411 (Cd4)
09171 Infectious disease: bacterial
05135 Yersinia infection
117715411 (Cd4)
09163 Immune disease
05340 Primary immunodeficiency
117715411 (Cd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
anu04090
]
117715411 (Cd4)
CD molecules [BR:
anu04090
]
Proteins
117715411 (Cd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
ig
Tcell_CD4_C
V-set
Ig_3
Ig_2
I-set
Receptor_2B4
LapA_dom
Motif
Other DBs
NCBI-GeneID:
117715411
NCBI-ProteinID:
XP_034368097
LinkDB
All DBs
Position
9:complement(62300718..62314446)
Genome browser
AA seq
457 aa
AA seq
DB search
MCGGISFRHLLLLQLQLSQLLADTQRTTVVLGKEGASVELPCESSQKNALFTWKYLDQRI
ILRRQNKEILLKGSFEKNDRFGSRKGAWEKGSFPLVINKLRMDDSQTYICEVENKKDKVE
LWVFRVTVSPGTTLLQGQNLTLTLDSNHKVSNPSIECKLKGGKIVKSSKVLFMSNLKTQD
SDVWNCTVTLSQKKHTFDMKLSVLGFQRTSITAYKSEGESAEFSFPLNFGEENLKGELWW
KAEKASFSQLWIDFSLKNRKISVEKSTNNPKPQLGEMLPLSLKIPQVSLQFAGSGILTLT
LDKGTLHQEVNLVVMKVTQHDNNTLTCEVAGPTSPKMRLTLKQENQEARVSEEKKWIQVT
APEEGMWHCLLSEDEEVKIDSKIQVLPRGLNQRAVFLAVVLGGAFGSLAIIGFCIFCCVR
CRHQQRQAARMSQIKKLLSEKKTCQCSHRMQKTHNLI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggaggcatctcctttaggcacttgctgctgctgcagctgcagctgtcccaactc
ctagctgacactcaaaggacgactgtggtgctggggaaagaaggggcttccgtggaactg
ccctgtgaaagttcccagaagaacgcactcttcacctggaagtaccttgaccagaggatt
attctgcgacggcagaacaaggagatattgcttaaaggttcatttgagaagaatgatcgg
tttggttccagaaaaggtgcatgggagaaggggtcatttcctcttgtcatcaataaactt
aggatggacgactctcagacttacatctgtgaggtggagaacaagaaagacaaggtggag
ttgtgggtgttcagagtgaccgtcagtccgggtaccaccctgttgcaggggcagaacctg
accctgaccttggatagcaaccataaggtctccaacccctcgatagagtgtaaactcaaa
gggggtaaaattgtcaagagctccaaagttctcttcatgtccaacctaaagactcaggac
agtgacgtctggaactgcaccgtgaccctgagccagaaaaagcacacgttcgacatgaaa
ctctcagtgctgggctttcagagaacatccatcacggcctataagagtgagggggagtca
gcggagttctccttcccactcaactttggagaggaaaacctgaagggagagctgtggtgg
aaggcagagaaggcttctttctcccagctctggatcgacttctctctaaagaacagaaag
atatctgtggaaaagtctaccaacaaccccaagccccagctgggggaaatgctccccctc
agcctcaagataccccaggtctcgcttcagtttgctggttctggcatcctgactctgact
ctggacaaaggcacactgcatcaggaagtgaacctggtggtgatgaaagtgactcagcat
gacaacaacactttgacctgtgaggtggcgggacctacctccccaaagatgagactgacc
ctgaagcaggagaatcaggaggctagggtctctgaggagaagaaatggattcaagtgacg
gcccctgaggaaggaatgtggcactgtctactgagtgaagatgaagaggtcaagatagac
tccaagatccaggttttacccagagggttgaaccagagagcagtgttcctggctgtcgtg
cttgggggcgcctttggttctctggctatcattgggttctgcatcttctgctgtgtcagg
tgccgccaccaacagcgccaggcagcacggatgtctcagatcaagaagctcctcagtgag
aagaagacctgccagtgctcccaccggatgcagaagacccataatctcatctga
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