Arvicanthis niloticus (African grass rat): 117716173
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Entry
117716173 CDS
T08817
Symbol
Dsel
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
anu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117716173 (Dsel)
Enzymes [BR:
anu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
117716173 (Dsel)
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
Motif
Other DBs
NCBI-GeneID:
117716173
NCBI-ProteinID:
XP_034369004
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All DBs
Position
10:68892179..68899840
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AA seq
1207 aa
AA seq
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MAFMFTGHLVFLTLMMYSFSTCEESVSNYSEWAVFTDDIQWFKSQKIQDFKPNQKLHPNL
YFDAGDIQTMKQKSRTSHLHIFRAIKSAVTIMLSNPSYYLPPPKHAEFAAKWNEIYGNNL
PPLALYCLLCPEDKVAFEFVMEYMDRMVSYKDWLVENAPGDEVPVGHSLTGFATAFDFLY
NLLGNQRKQKYLEKIWIVTEEMYEYSKTRSWGKQLLHNHQATNMIALLIGALVTGVDKGY
KANIWKQVVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTSKSVTQYVFLAQRHFNINNFDN
NWLKMHFWFFYATLLPGYQRTVGIADSNYNWFYGPESQLVFLDKFILQNGAGNWLAQQIR
KHRPKDGPMVPSTAQRWSTLHTEYIWYDPTFTPQPPVDFGTAKMHVFPNWGVVTYGGGLP
NTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWKSFNPGHEHPDQNSFTFAPNGQVFV
SEALYGPKLSHLNNVLVFAPSPSSQCNQPWEGQLGECAQWLKWIGEEVGDAAGEVITAAQ
HGDRMFVSGEAVSAYSSAMRLKSVYRALLLLNSQTLLVVDHIERQETSPINSVSAFFHNL
DIDFKYIPYRFMNRYNGAMMDVWDAHYKMFWFDHHGNSPVANIQEAEQAAEFKKRWTQFV
NVTFHMESTITRIAYVFYGPYVNISSCRFIDSSSSGLQISLHVNSSEHSVSVVTDYQNLK
SRFSYLGFGGFASVANEGQITRFGLGTQAIVNSVRHDRVNFPFGFKFNIAVGFILCISLV
ILTFQWRFYLSFRKLMRCVLILVMALWFIELLDLWSTCTQPICAKWTRTEAKTNEKVMIS
EGHHVDLPNVVITSLPGSGAEILKQVFFNSSDFLYIRIPTAYLDIPETEFEIDSFVDACE
WKVSDIHSGHFHLLRGWLQSLVQDTKLHLQNIHLHETSRNKLAQYFITNKDKKRKLKRRE
SLPDQRSRIRGTFDRDAEYIRALRRHLVYYPSARPVLSLSSGSWTLKLQFFQEVLGTSLR
ALYIVRDPRAWIYSMLYGSKPSLYSLKNVPEHLAKLFKIEEGKSKCNSNSGYAFEYESLK
KELEISQSNAVSLLSHLWVANTAAALRINTDLLPTSYHLVKFEDIVHFPQKTTERIFAFL
GIPLSPASLNQMLFATSTNLFYLPYEGEISPSSTNIWKTNLPGDEIKLIENICWTLMDRL
GYPKFMD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttatgtttacaggacatttagtatttttaacattgatgatgtatagtttttct
acttgtgaagaatctgtgagcaattattctgaatgggcagttttcacagacgatatacaa
tggtttaagtcacagaaaatacaagatttcaaacccaaccaaaaacttcatccaaattta
tattttgatgctggagatatacaaacaatgaaacaaaagtctcgtacgagccatttgcat
atttttagagctatcaaaagtgcagtgacaattatgctgtccaatccatcatactaccta
cctccacccaagcatgctgaatttgctgccaagtggaatgaaatatatggtaataatctt
cctcctttagcattgtattgtttattatgcccagaagacaaggttgcctttgaatttgtc
atggaatacatggacaggatggttagctacaaagactggctagttgagaatgcaccaggg
gatgaggttccagttggccattctttaacaggttttgccactgcctttgactttttatat
aatctattaggtaatcagcgaaaacaaaagtacctagaaaaaatttggattgttacagag
gaaatgtatgaatattccaagactcgctcatggggcaaacaacttcttcataaccaccaa
gctacaaacatgatagcattacttataggggccttggttactggagtagataaaggatat
aaagcaaacatatggaaacaagttgttgttgatgtgatggaaaagactatgtttctcttg
aatcatattgtagacggctctttggatgaaggtgtggcctatggaagctatacctcaaaa
tcagttacacagtatgttttcttggcacagcgccattttaacatcaacaactttgataat
aactggctaaaaatgcatttttggtttttttatgctacgcttttgccaggctatcaaaga
actgtaggcatagcagattccaattataattggttttatggtccagaaagccagctagtt
ttcttggataagttcattttacagaatggagctggaaattggttagctcagcaaattaga
aagcatcgacctaaggatggaccaatggttccttccactgctcagcggtggagtactctt
catactgaatacatctggtatgatccaacattcaccccacagcctcctgttgactttggt
actgcaaaaatgcacgtatttcctaactggggtgtcgtgacttatgggggtgggctgcca
aacacccagaccaatacctttgtgtcttttaaatctgggaaactgggaggacgagctgtg
tatgacatagttcactttcagccatattcctggattgatggatggaaaagctttaaccca
ggacatgaacatccagatcaaaattcatttacttttgcccctaatgggcaagtgtttgtt
tctgaggctctttatggaccaaagttgagccaccttaataacgtattggtgtttgcccca
tcaccatcaagccaatgtaatcagccctgggaaggtcaactgggagaatgtgcacagtgg
ctcaagtggattggcgaagaggttggtgatgcagctggggaagttattactgctgctcaa
catggagataggatgtttgtcagtggggaagcagtgtctgcttattcttctgcaatgaga
ctgaaaagtgtctatcgtgcactacttcttttaaattcacaaactctgcttgttgttgat
catattgaaaggcaagaaacttccccaataaattctgtcagtgccttctttcataatttg
gatattgattttaaatacatcccatacaggtttatgaataggtataatggtgccatgatg
gatgtgtgggatgcacactataaaatgttttggtttgatcaccatggcaacagtcctgtg
gctaatatacaggaagcagaacaggctgctgaatttaagaaacggtggactcagtttgtt
aatgttacatttcatatggaatccacaatcacaagaattgcttatgtattttatggtcca
tatgtcaatatttccagctgcagatttattgatagttccagttctggacttcagatttct
ttacatgtaaacagttcagaacatagtgtttctgttgtaactgactatcaaaacctgaaa
agcagattcagttacctaggatttggtggttttgccagtgtggctaatgaaggacaaata
acccgatttggtttgggtactcaagcaatagtaaactctgtaagacatgatagagttaat
ttccccttcgggtttaaatttaatatagcagttggattcattttgtgtattagtttggtt
attttaacttttcaatggcggttttacctttcctttagaaagctaatgcgctgtgtatta
atacttgttatggccttgtggtttattgagcttctggatctatggagcacttgcactcag
cccatctgtgcaaagtggacaaggactgaagctaagacaaatgagaaggtcatgatttct
gaagggcatcatgtggatcttcctaatgttgttattacctcactccctggttcaggagct
gaaattctcaaacaggtttttttcaacagtagtgattttctctacatcagaattcctaca
gcctacctggatatccctgaaactgaatttgagattgactcatttgtagatgcctgtgaa
tggaaagtatcagatatccacagtggacactttcatcttcttcgagggtggctgcagtct
ttggtccaggatacaaaacttcacttgcaaaacatccatctacatgaaaccagtaggaat
aaactggcccaatattttataactaataaggacaaaaaacgaaaattgaaaagaagagag
tctttgccagatcaaagaagtagaataagaggaacatttgatagagatgctgaatatatt
agggctttaagaagacaccttgtttattacccaagtgcacgtcctgtgctcagcttaagt
agtggtagctggacattgaagcttcagttttttcaggaagttttaggaacttcactgcgg
gcattgtatatagtgagagaccctcgagcttggatctattcaatgctatatggtagtaaa
ccaagtctttattctttgaagaatgtaccagagcacttagcaaaattgtttaaaatagag
gaaggtaaaagcaaatgtaactcgaattctggctatgcttttgagtatgaatcactcaag
aaagaattagaaatatcccaatcaaatgctgtctccttgttatctcatttgtgggtagca
aacactgcagcagccttgagaataaatacagatttgctgcctaccagctaccatctggtc
aagtttgaagatattgttcattttcctcagaagactactgaaaggatttttgctttcctt
ggcattcctttgtctcctgctagtttaaaccaaatgctatttgccacttccacaaacctt
ttttatcttccatatgagggggaaatatcaccgtctagtactaatatttggaaaacaaac
ttgcctggagatgaaattaaactaattgaaaacatttgctggacactgatggatcgtcta
ggatatccaaagtttatggactaa
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