Arvicanthis niloticus (African grass rat): 117716340
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Entry
117716340 CDS
T08817
Symbol
Dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117716340 (Dhx9)
03012 Translation factors [BR:
anu03012
]
117716340 (Dhx9)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117716340 (Dhx9)
5.6.2.6 RNA 3'-5' helicase
117716340 (Dhx9)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117716340 (Dhx9)
Translation factors [BR:
anu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117716340 (Dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
AAA_19
ResIII
AAA_22
AAA_14
ATPase
PhoH
Motif
Other DBs
NCBI-GeneID:
117716340
NCBI-ProteinID:
XP_034369276
LinkDB
All DBs
Position
10:complement(40625243..40656277)
Genome browser
AA seq
1390 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIVPPPPILSDTSDSTASTGEGLPAPMGGPLPPHLAL
KAAENNSGVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWT
LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKL
AAQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSPDLELQLQNVVQELDLEI
VPPPVDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYAST
EQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGK
TTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFES
ILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEV
RIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKE
DDGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL
PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE
TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC
SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR
ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEG
KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAK
VQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEG
RNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQS
DGQIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQ
ISRPSAAGINLMIGSVRYGDGPRPPKMARYDNGSGGYRRGYGGGGYGGGGYGGGYGGGGF
GGGFGSGGGGFGGGFNSGGGGFGSSGGGFGSGGGGFGGGGGGGFSGGGGGGFGGGRGGGG
GGFGGSGGFGSGGGGYGVGGGGYGGGGGSGGGYGGGSGGYGGGGGGYGGGEGYSMSPNSY
RGNYGGGGGGYRGGAQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGGFQRRGYGGGYFGQG
RGGGGGGGGY
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacatcaaaaattttctgtatgcctggtgtggcaaaaggaagatgacaccagcc
tatgaaattagagcagtaggaaacaaaaacagacagaaattcatgtgtgaggttcgagta
gaagggtttaattatgctggtatgggcaattccaccaataaaaaagatgcacagagtaat
gctgccagagactttgttaactatttggttcgaataaatgaagtaaagagtgaagaagtt
ccagctgttgggattgtaccacccccgcccatacttagtgacacctctgatagcacagca
agtactggagaaggcttaccagcacccatgggaggaccacttcctcctcatctggctctc
aaagcagcagaaaataattctggagttgagtcttcatctggctatggttctcctggacct
acctgggaccgaggagccaacttaaaggattactactcaagaaaggaagaacaagaagtg
caagcgactctagagtcagaagaagtggatttaaatgctgggcttcatggaaactggaca
ttggaaaatgctaaggctcgtctgaaccagtatttccaaaaagaaaagatccaaggagaa
tataagtacacccaagtgggtcccgaccacaacaggagctttattgcagaaatgaccatt
tatatcaagcagctgggcagaaggatttttgcacgtgaacatggatcaaataagaaatta
gcggcacagtcatgtgccctctcccttgtccgacagctctatcatcttggagtgattgaa
gcttactctggtcttacaaagaagaaagaaggagagagagtggagccttacaaagttttc
ctttctccagatttggagcttcagctgcaaaatgtggttcaagagctagatcttgaaatt
gtgcccccacctgttgatccttctatgcccgttatacttaacattgggaaattagctcat
tttgaaccatctcagaggcaaaatgcagtaggagtggttccttggtcacctccacagtcc
aactggaatccttggacaagtagcaacattgatgaggggcccctcgcttatgcttctaca
gaacaaataagcatggaccttaagaatgaattaacataccagatggaacaggatcataat
ttacaaagtgtgttacaagagagagagttgcttcctgtgaagaaatttgaagctgaaatt
ctggaagccattagtcaaaattcagttgtgattatccgaggggctactggttgtggtaaa
accacacaagttccacagtacattttggacgactttatccagaatgacagagcagccgag
tgcaatattgttgtgactcagcccagaagaatcagtgcagttgcagtggctgagcgagtt
gcttatgagagaggagaagaacctggaaaaagctgtggctacagtgtccgatttgagtct
attcttccacgccctcacgccagtataatgttttgtactgtaggtgtgctgctaagaaaa
ctagaagcaggcattcgaggaatcagtcacgttattgtggatgaaattcatgaaagagat
attaatactgacttccttttggtagtactgcgtgatgtggttctggcttatcctgaagtt
cgaattgttcttatgtctgcaactattgataccaccatgttctgtgaatatttcttcaat
tgtcccatcattgaagtttatggaaggactttcccagttcaagaatattttctggaagac
tgcattcagatgacccaattcattccccctccaaaggacaagaaaaagaaggacaaagag
gatgatggtggtgaagatgatgatgcaaattgcaatctaatatgtggtgacgaatatggg
ccagaaacaaagttgagcatgtctcagttgaatgaaaaggaaactccttttgagctcatt
gaagcgctccttaaatacattgaaacccttaatgttcctggagctgtgttggtattttta
cctggctggaacttgatttatactatgcaaaagcatttagaaaataattctcatttcgga
agtcatcggtatcagattctacctcttcattctcagattcctcgggaggaacagcgcaaa
gtgtttgatccagtaccggatggagtaacaaaggttattttgtccacaaacattgctgaa
acaagtattaccataaatgatgttgtttacgtcattgactcctgcaaacaaaaagtgaag
ctatttactgctcacaacaacatgaccaactatgctactgtatgggcatcaaaaacaaac
cttgagcagagaaaagggcgagctggccgtgtacgacctgggttctgtttccacctttgt
agtcgagctcgttttgacagattagagacccacatgacaccggagatgtttagaacacca
ttgcatgaaattgctttgagcataaaacttctccgtctaggaggaattggccagttcctt
gcaaaggcaattgaacctccacctttggatgctgtaattgaagcagagcatactctaaga
gaacttgatgctttagatgctaatgatgagttgactcctcttggacgaatcctggctaaa
ctccccattgagcctcgctttggaaaaatgatgataatggggtgtattttctatgttgga
gatgctgtctgtaccatctctgctgctacctgctttccagagccctttatcagtgaagga
aaacgcctggggtacatacaccggaattttgctggaaacagattttctgatcatgtggct
cttttatcagtattccaagcctgggatgatgctagaatgagtggagaagaagcagaaata
cgtttttgtgagcaaaagagacttaatatggctacactaagaatgacttgggaggccaaa
gtacagcttaaagagattctgattaactctggttttccagaagattgtttattgacacaa
gtgtttactaacactggcccagataataatttggatgttgttatctctctgctggctttt
ggtgtgtaccccaatgtatgctatcataaggaaaagagaaagattcttacgactgaaggg
cgtaatgcacttatccacaagtcatctgtgaactgtccttttagcagccaagacatgaag
tacccatctcccttttttgtttttggtgaaaagattcgaacccgagccatctctgctaaa
ggcatgaccttagtgaccccgttgcaactacttctctttgcctccaagaaagtccagtct
gatgggcagattgtgtttatagatgactggataagactacagatatcacatgaagctgca
gcgtgcatcacagccctcagggcagccatggaagctctggtggttgaagtatccaaacaa
ccaaatattatcagccagttggaccctgtaaatgaacatatgctaaacacaatccgacag
atttctaggccctcagctgctggtatcaaccttatgattgggagtgtaaggtatggcgat
ggtccaagacctcccaagatggcccgatatgataatggaagtggtggatataggagggga
tatggtggaggaggatatggtggaggaggatatggtggtggatatggtggaggtggcttt
gggggaggctttggaagtggtgggggaggctttggaggaggctttaacagtggtggggga
ggttttggtagtagtggaggtgggtttggcagtggtggaggtggatttggtggtggtggg
ggaggaggcttcagtggaggaggaggtggtggatttggtggtggcagaggaggaggcggt
ggtggctttgggggtagtggaggctttggaagtggtggaggaggctatggtgttggaggt
ggtggctatggaggtggtggcggtagtggtggcggctatggaggcggcagtggagggtat
ggaggtggtggagggggctatggtggtggggaaggttatagtatgagtcccaactcttac
cgtggaaattatggtggtggggggggaggatatagaggaggtgcccaaggaggctacaga
aacaactttggtggagactatagaggatccagtggagattaccggggatctggtgggggc
tatagaggatctggaggattccagcgaaggggttatggaggtggttattttggacaagga
agaggaggaggagggggtggtggtggctattaa
DBGET
integrated database retrieval system
