Arvicanthis niloticus (African grass rat): 117716349
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Entry
117716349 CDS
T08817
Symbol
Pkp1
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117716349 (Pkp1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117716349 (Pkp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
V-ATPase_H_C
Med16_bridge
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
117716349
NCBI-ProteinID:
XP_034369295
EnsemblRapid:
ENSANLG00005007799
LinkDB
All DBs
Position
10:complement(24974759..25017613)
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AA seq
731 aa
AA seq
DB search
MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVMMTVKRQKSKSSQSS
TLSHSNRGKGSMYDGLADNYNNYGTTSRSSYFSKFQAGNGSWGYPIYNGTLKREPDNRRF
SSYSQMENWSRHYPRGSCATTGAAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKG
QKTTQNRYSFYSTCSGQKAVKKCPVRPPSCTSKQDPVCVPPISCNKDLSFGHSRASSKIC
SEDIECSGLTIPKAVQYLCSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLL
RSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRSGSTEIQKQLTGLLWN
LSSTDELKEELVADALPVLTDRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSA
DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQL
EYNTRNAYTEKSSTGCFSNRADKMMNNNYDCPLPEEETNPKGSSWLYHSDAIRTYLNLMG
KSKKDATLEACAGALQNLTASKGLMSNGMSQLIGIKEKGLPQIARLLQSGNSDVVRSGAS
LLSNMSRHPVLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMTSQPQMAK
QYFSNSMLNNVFNLCRNSASSPKAAEAARLLLSDMWASKELQSVLRQQGFDRNMMGNIAG
ANSLRNFTSRF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcgccgctcaagaccgcgctggcgtacgaatgcttccaggaccaggacaac
tccacgctcgctttgccctctgatcaaaagatgaaaaccggcacgtccggcagacagcgt
gtgcaggagcaggtgatgatgaccgtcaaacggcagaagtccaagtcttctcagtcgtcc
accttgagtcactccaacagaggtaaaggctccatgtatgatgggctggctgacaattac
aacaactacggcactacgagcagaagcagctacttctccaagttccaggcaggcaatggc
tcgtggggatatccgatctacaatgggaccctcaagcgggagccggacaacaggcgcttc
agctcctatagtcagatggagaactggagccggcactatccccgagggagctgtgccacc
acgggcgccgccggcagtgacatctgcttcatgcagaaaatcaaggcgagccgcagtgag
cctgacctctactgtgacccaaggggcacactgcgcaagggcaccctgggcagcaagggc
caaaagaccacccagaaccggtacagcttttacagtacgtgcagcggccagaaggcggtc
aagaagtgtcccgtgcggccgccctcctgcacctccaagcaagacccggtgtgtgtgccg
cctatctcctgcaacaaggacctgtcctttggccactcaagggccagttccaaaatctgc
agtgaggacattgaatgtagtgggctgaccatccccaaggctgtgcagtacctgtgctcc
caggatgagaagtaccaggccatcggggcttattacatccagcacacctgcttccaggat
gaatcggccaagcaacaggtctatcagctggggggcatctgcaagctggtggaccttctc
cgcagccccaatcagaatgtccagcaggctgctgccggggccctgcgaaacctggtattc
agaagcaccaccaacaagctggagaccaggaggcagaatgggatccgtgaggctgtcagc
ctcctgaggagaagcgggagcacggagatccagaaacagttaactgggctactctggaac
ctgtcttccactgacgagctgaaggaggagctggtggccgatgccctgcccgtcctgact
gaccgggtcatcattcctttctctggctggtgtgatggtaacagcaacatgtcccgggaa
gtagtggaccctgaggtcttcttcaatgccacaggctgcttgaggaacctaagttcagct
gatgctggccgccagactatgaggaactactctgggctcattgactccctcatggcctat
gtccagaactgtgtggctgccagccgttgtgatgacaagtctgtggagaactgcatgtgt
atcctgcataacctctcctaccgcctggacgccgaggtgcccacccgttaccgccagctg
gagtacaatacccgcaatgcctacaccgagaagtcctccactggctgcttcagcaacagg
gctgacaagatgatgaacaataactatgactgcccacttcctgaggaagagaccaacccc
aaggggagcagctggctgtaccactcagatgccatccgcacctacctgaacctcatgggc
aagagcaagaaagatgctaccttggaggcctgtgctggggccctgcagaacctgacagcc
agcaagggactgatgtccaatggcatgagtcagttgattggaataaaggagaagggcttg
ccacaaatcgctcgtctactgcaatctggcaattcagatgtggtgaggtccggggcctct
ctgctgagcaacatgtctcgccaccctgtgctgcacagagtgatgggaaaccaggtgttc
ccagaggtaaccagactcctcactagccacaccggcaataccagcaactctgaagatatc
ttgtcgtcagcctgctacactgtgaggaacctgatgacctcacagcctcagatggccaag
cagtacttctccaacagcatgctcaacaatgtcttcaacctgtgccgcaacagtgcctcc
tcacctaaggctgcagaggctgcccggctactcctgtctgacatgtgggcaagcaaggag
ctgcagagtgtcctcaggcagcaaggtttcgataggaacatgatgggaaatatagctggg
gccaacagcctcagaaacttcacctctcggttctaa
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