Arvicanthis niloticus (African grass rat): 117716371
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Entry
117716371 CDS
T08817
Symbol
Traf5
Name
(RefSeq) TNF receptor-associated factor 5
KO
K09849
TNF receptor-associated factor 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04064
NF-kappa B signaling pathway
anu04217
Necroptosis
anu04621
NOD-like receptor signaling pathway
anu04657
IL-17 signaling pathway
anu04668
TNF signaling pathway
anu05163
Human cytomegalovirus infection
anu05168
Herpes simplex virus 1 infection
anu05169
Epstein-Barr virus infection
anu05170
Human immunodeficiency virus 1 infection
anu05200
Pathways in cancer
anu05203
Viral carcinogenesis
anu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
117716371 (Traf5)
04668 TNF signaling pathway
117716371 (Traf5)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117716371 (Traf5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117716371 (Traf5)
04657 IL-17 signaling pathway
117716371 (Traf5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117716371 (Traf5)
05203 Viral carcinogenesis
117716371 (Traf5)
09162 Cancer: specific types
05222 Small cell lung cancer
117716371 (Traf5)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
117716371 (Traf5)
05168 Herpes simplex virus 1 infection
117716371 (Traf5)
05163 Human cytomegalovirus infection
117716371 (Traf5)
05169 Epstein-Barr virus infection
117716371 (Traf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117716371 (Traf5)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117716371 (Traf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4_2
Sina_ZnF
zf-TRAF_2
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_4
TRAFD1-XIAF1_ZnF
zf-RING_6
zf-RING_UBOX
zf-RING_2
TFA2_Winged_2
KIF21A_2nd
OVT1
DUF5917
Motif
Other DBs
NCBI-GeneID:
117716371
NCBI-ProteinID:
XP_034369323
LinkDB
All DBs
Position
10:complement(65250263..65294544)
Genome browser
AA seq
558 aa
AA seq
DB search
MAHSEEQEVVPCAFIRQNSANSISLDFEPDTEYQFVEQLEERYKCAFCHSVLHNPHQTGC
GHRFCQHCILSLRELNAVPICPVDKEVIKPQEVFKDNCCKREVLNLHVYCKNAPGCNARI
ILGRFQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLSAYCRFREEKCLYCKRDIVVTNL
QDHEENSCPAYPVSCPNKCVQTIPRAGVNEHLTVCPEAEQDCPFKHYGCTVKGKRGNLQE
HERAALQDHMLLVLEKNFQLEQQISDLYQSLEQKESKIQQLAGTVKKFEKDLKQFTQMFG
RNGSFLSNVQALTSHTDKSAWLEAQVRQLLQIVNQQPSRLDLRSLVDAVDSVKQRITQLE
ASDQRLVLLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYSGKLIWKVTDYRVKKREA
VEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKKNHIVETFKADPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIK
DDTLFLKVAVDLTDLEDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccattcagaggagcaagaggttgtcccctgtgccttcatccgccagaactctgcc
aactccatttccttggactttgagcccgacacagagtaccaatttgtggagcagctggaa
gaacggtacaaatgtgccttctgtcactcggtgcttcacaacccccaccagactggctgc
gggcaccgcttctgccagcactgcatcctgtctctgagagaattgaacgcagtgccgatc
tgcccagtagacaaggaggtcatcaagcctcaggaggtgtttaaagacaactgctgcaag
agagaagttctcaatttacacgtctactgtaaaaacgcccccggatgcaatgccagaatt
attctgggacgattccaggaccaccttcagcactgttccttccaagccgtgccctgccct
aacgagagctgccgggaagccatgctccggaaagatgtgaaggagcatctgagcgcatac
tgccggttccgagaggagaagtgtctttactgcaaaagggacatagtggtgaccaacctg
caggatcatgaggaaaactcgtgtcctgcgtacccagtgtcttgtcccaacaagtgtgtg
cagactattccaagagctggggtgaatgaacaccttactgtatgtccagaggctgagcaa
gactgtccctttaagcactatggctgcactgtcaagggtaagcgggggaacttgcaggag
catgagcgggcagccctgcaggaccacatgcttctggttttagagaagaacttccaacta
gaacagcagatctctgacttgtatcagagtcttgaacagaaagaaagcaagatccagcag
ctggcaggaaccgtgaagaagttcgaaaaggaccttaagcagttcacacagatgtttggc
agaaacggaagtttcctctctaatgtccaggctctcaccagtcacacggacaagtcagcc
tggctggaagcgcaggtgcggcagctgctacagatagtcaaccagcagccaagtcgactt
gatctgaggtctttggtggatgcggttgacagcgtgaaacagaggatcactcagctggaa
gccagtgaccagaggttagttcttttagaaggggagaccaacaagcacgacgcacacatt
aatatccacaaagcccagctgaataagaacgaagaacggtttaaactgctggagggcgcc
tgctacagtggcaagctcatttggaaggtgacagattacagggtgaagaagagggaggct
gtggaggggcacacagtgtccgtcttcagccagcctttctacaccagccgctgcggctac
cggctctgtgccagggcgtacctgaacggggatgggtcggggaagggaacgcacctgtcc
ctgtactttgtggtgatgcggggtgagtttgactcactgttgcagtggccgttcaggcag
agggtgaccctgatgcttttggaccagagtggcaagaagaaccacattgtggagaccttc
aaagctgaccccaacagcagcagcttcaaaagaccggatggcgagatgaacattgcctct
ggctgtccccgctttgtgtcacattctactctggagaattccaagaacacctacattaaa
gacgacaccctattcttgaaagtggccgtggatttaactgacttggaggatctgtaa
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integrated database retrieval system
