KEGG   Arvicanthis niloticus (African grass rat): 117718524
Entry
117718524         CDS       T08817                                 
Symbol
Vdr
Name
(RefSeq) vitamin D3 receptor
  KO
K08539  vitamin D3 receptor
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04928  Parathyroid hormone synthesis, secretion and action
anu04961  Endocrine and other factor-regulated calcium reabsorption
anu04978  Mineral absorption
anu05152  Tuberculosis
anu05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:anu00001]
 09150 Organismal Systems
  09152 Endocrine system
   04928 Parathyroid hormone synthesis, secretion and action
    117718524 (Vdr)
  09154 Digestive system
   04978 Mineral absorption
    117718524 (Vdr)
  09155 Excretory system
   04961 Endocrine and other factor-regulated calcium reabsorption
    117718524 (Vdr)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    117718524 (Vdr)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    117718524 (Vdr)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:anu01009]
    117718524 (Vdr)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:anu03000]
    117718524 (Vdr)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:anu03310]
    117718524 (Vdr)
Protein phosphatases and associated proteins [BR:anu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117718524 (Vdr)
Transcription factors [BR:anu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    117718524 (Vdr)
Nuclear receptors [BR:anu03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   117718524 (Vdr)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 117718524
NCBI-ProteinID: XP_034372091
LinkDB
Position
13:complement(72126106..72177947)
AA seq 423 aa
MEAMAASTSLPDPGDFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTC
PFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMIMKRKEEEALKDSL
RPKLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPIRVDTSTGSYSPRPTLSFSGDSSS
SSSDVYTTSLDMMEPSSFSNLDLNEEDSDDPSVTLDLSPLSMLPHLADLVSYSIQKVIGF
AKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMTWDCGSQDYKYDIADVSKAG
HTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQ
TYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGN
EIS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggaggcaatggcagccagcacttccctgcctgaccctggtgactttgaccggaatgtg
ccccggatctgtggagtgtgtggagaccgagccacaggcttccacttcaatgctatgacc
tgtgaaggctgcaaaggtttcttcaggcggagcatgaagcgcaaagccctgttcacctgt
cccttcaatggagattgccgcatcaccaaggacaaccggcgacactgccaggcctgccga
ctcaaacgctgtgtggacatcggcatgatgaaggagttcatcctaacagacgaggaagtg
cagagaaagagggagatgatcatgaagagaaaggaggaagaggccctgaaggacagcctg
aggcccaagctgtctgaggagcagcagcacatcatagccatcctgctggatgcccaccac
aagacctacgatcccacctatgctgacttcagggacttccggcctccaattcgtgtggac
acaagtacagggagctattctccaaggcccacactcagcttctccggggactcctcctcc
tccagctccgatgtgtacaccacctcactagacatgatggaaccatccagcttctccaac
ctggatctgaatgaagaggattctgatgatccctctgtgactctggacctgtctccgctc
tccatgttgccccacctggctgaccttgtcagttacagcatccaaaaggtcatcggcttt
gccaagatgattccaggattcagggatctcacctccgatgaccagattgtcctgcttaag
tcaagtgccattgaggtgatcatgttgcgttccaaccagtctttcaccatggatgacatg
acctgggactgtggcagccaggactacaagtatgacatcgctgatgtctccaaagctggg
cacaccctggagctgattgagcccctcataaagttccaggtggggctgaagaagctgaac
ttacacgaggaagaacatgtcctgctcatggccatctgcattgtctccccagaccgacct
ggggtccaggacgccaagctggttgaagccatccaggaccgcctatccaacacgctgcag
acctatatccgctgccgccacccacccccaggcagccaccagctctacgccaagatgatc
cagaagctggctgacctgcggagcctcaacgaggaacactccaaacagtaccggtccctc
tccttccagccggagaatagcatgaagctcacaccccttgtgctagaggtgtttgggaat
gaaatctcctga

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