Arvicanthis niloticus (African grass rat): 117718608
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Entry
117718608 CDS
T08817
Symbol
Nectin2
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03266
Virion - Herpesvirus
anu04514
Cell adhesion molecule (CAM) interaction
anu04517
IgSF CAM signaling
anu04520
Adherens junction
anu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117718608 (Nectin2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117718608 (Nectin2)
04517 IgSF CAM signaling
117718608 (Nectin2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117718608 (Nectin2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117718608 (Nectin2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117718608 (Nectin2)
04090 CD molecules [BR:
anu04090
]
117718608 (Nectin2)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
Nectin family
117718608 (Nectin2)
CD molecules [BR:
anu04090
]
Proteins
117718608 (Nectin2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
ig
Ig_3
V-set
Ig_2
I-set
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
117718608
NCBI-ProteinID:
XP_034372295
LinkDB
All DBs
Position
1:complement(3168289..3201810)
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AA seq
529 aa
AA seq
DB search
MARAAVLPPSRLSPTLPLLPLLLLLLQETGAQDVRVRVLPEVRGRLGGIVELPCHLLPPT
TERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFNKERLSFVRARQETNADLRDATLAFRG
LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGR
PPARITWISSLGGEARDIQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPV
LLPVTLSVRYPPEVSISGYDDNWYLGRSEAVLTCDVRSNPEPTGYDWSTTSGVFPASAVV
QGSQLLVHSVDRMVNTTFICTATNAVGTGRAEQVILVRESPSTAGAGATGGIIGGIIAAI
IATAVAGTGILICRQQRKEQRLQAADEEEELEGPPSYKPPTPKAKLEEPEMPSQLFTLGA
SEHSPVKTPYFDAGVSCADQEMPRYHELPTLEERSGPLLLGATSLGPSLLVPPGPNVVEG
VSLSLEDEEEDEEEDFLDKINPIYDALSYPSPSDSYQSKDFFVSRAMYV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggccgcagtcctcccgccgtccagattgtcaccgacgctgccgttgttgccg
ctgctactgctcctgcttcaggaaacaggagcccaagatgtgcgggttcgagtgctcccc
gaggttaggggccgcctgggaggcatcgtggagctaccgtgccacctgctcccacccacg
acagagcgcgtctctcaggtgacctggcagcgcctggatggcacagttgtggccgccttc
cacccatccttcggcgtggattttcctaactctcagttcaacaaggagcgtctgtccttt
gtcagagcaagacaggaaacaaacgcggacctgcgggatgccacactggccttccgggga
ctgagggtagaagacgagggcaattatacctgcgagtttgccacgtttcccaacggtacc
cgcaggggggtgacctggctcagagtcatagcccagcctgagaaccacgctgaagcccag
gaggtcacaattggcccccagtccgtggctgttgcccgctgtgtctccacggggggccgc
ccccctgcccgaatcacctggatctcatccctgggtggagaggccagagatattcaggag
ccggggatacaggctggcacggtcaccatcatcagccgatactccttggtgcccgtgggc
cgagcggatggcgtcaaggtcacgtgcagagtggaacatgagagcttcgaagagccagtc
ctgctgccggtgactctctccgtacgctaccctcccgaagtatcgatctctggctatgat
gacaactggtaccttggccgcagtgaggccgtactgacctgtgatgtacgaagcaaccca
gagcccacaggctatgactggagcacgacctcgggcgtcttcccagcctccgcagtggtt
cagggctctcagctgcttgtccactctgtggatcgaatggtcaacactaccttcatctgt
acagccaccaacgctgtggggacaggtcgtgctgagcaggtcatcctggtgcgagagtca
cccagcacggcaggagcaggggccacggggggcatcatcggaggcatcatcgctgccatc
atcgccactgcagtggctggcacaggcatcctcatctgccgacaacagcggaaagagcag
aggcttcaggcggcagatgaggaagaagaactggaaggacctccctcctataagccaccc
actccgaaggccaagctggaggaacctgagatgccctctcagctcttcactttgggagcc
tcggagcacagcccagtgaagacaccatacttcgatgctggtgtctcttgtgctgatcag
gagatgcctcggtatcacgagttgcccaccctggaagagcggtcagggcccctgctgctg
ggggctacaagcctgggaccttctcttctggtgcctccaggacccaatgttgtggagggg
gtttccctgagtctggaagatgaagaggaagatgaggaggaagacttcctggataaaatc
aaccctatttatgatgccctgtcctatcccagcccctctgactcctaccagagcaaagac
ttttttgtgtcacgggccatgtatgtgtga
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