KEGG   Arvicanthis niloticus (African grass rat): 117719097
Entry
117719097         CDS       T08817                                 
Symbol
Rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03420  Nucleotide excision repair
anu04066  HIF-1 signaling pathway
anu04110  Cell cycle
anu04114  Oocyte meiosis
anu04120  Ubiquitin mediated proteolysis
anu04141  Protein processing in endoplasmic reticulum
anu04310  Wnt signaling pathway
anu04350  TGF-beta signaling pathway
anu04710  Circadian rhythm
anu05170  Human immunodeficiency virus 1 infection
anu05200  Pathways in cancer
anu05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117719097 (Rbx1)
   04120 Ubiquitin mediated proteolysis
    117719097 (Rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117719097 (Rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117719097 (Rbx1)
   04350 TGF-beta signaling pathway
    117719097 (Rbx1)
   04066 HIF-1 signaling pathway
    117719097 (Rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117719097 (Rbx1)
   04114 Oocyte meiosis
    117719097 (Rbx1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    117719097 (Rbx1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117719097 (Rbx1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    117719097 (Rbx1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    117719097 (Rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:anu04121]
    117719097 (Rbx1)
   03400 DNA repair and recombination proteins [BR:anu03400]
    117719097 (Rbx1)
Enzymes [BR:anu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     117719097 (Rbx1)
Ubiquitin system [BR:anu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   117719097 (Rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     117719097 (Rbx1)
   Cul2 complex
     117719097 (Rbx1)
   Cul3 complex
     117719097 (Rbx1)
   Cul4 complex
     117719097 (Rbx1)
   Cul7 complex
     117719097 (Rbx1)
   Cul8 complex
     117719097 (Rbx1)
   Cul9 complex
     117719097 (Rbx1)
DNA repair and recombination proteins [BR:anu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117719097 (Rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117719097 (Rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 117719097
NCBI-ProteinID: XP_034373091
LinkDB
Position
13:56463037..56471225
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggatacccccagcggcaccaacagcggcgcgggcaagaag
cgctttgaagttaaaaagtggaatgcagtagcgctctgggcctgggacatcgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcattgaatgtcaggccaaccag
gcgtcagctacttccgaagagtgtacggttgcatggggagtctgtaaccatgcttttcat
ttccactgcatctctcgatggctcaaaacgaggcaggtgtgtccgctggacaacagagag
tgggaattccaaaagtatgggcattaa

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