Arvicanthis niloticus (African grass rat): 117719688
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Entry
117719688 CDS
T08817
Symbol
Pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01521
EGFR tyrosine kinase inhibitor resistance
anu04010
MAPK signaling pathway
anu04014
Ras signaling pathway
anu04015
Rap1 signaling pathway
anu04020
Calcium signaling pathway
anu04072
Phospholipase D signaling pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04540
Gap junction
anu04630
JAK-STAT signaling pathway
anu04810
Regulation of actin cytoskeleton
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05206
MicroRNAs in cancer
anu05214
Glioma
anu05215
Prostate cancer
anu05218
Melanoma
anu05230
Central carbon metabolism in cancer
anu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117719688 (Pdgfrb)
04014 Ras signaling pathway
117719688 (Pdgfrb)
04015 Rap1 signaling pathway
117719688 (Pdgfrb)
04630 JAK-STAT signaling pathway
117719688 (Pdgfrb)
04020 Calcium signaling pathway
117719688 (Pdgfrb)
04072 Phospholipase D signaling pathway
117719688 (Pdgfrb)
04151 PI3K-Akt signaling pathway
117719688 (Pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117719688 (Pdgfrb)
04540 Gap junction
117719688 (Pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117719688 (Pdgfrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117719688 (Pdgfrb)
05206 MicroRNAs in cancer
117719688 (Pdgfrb)
05230 Central carbon metabolism in cancer
117719688 (Pdgfrb)
05231 Choline metabolism in cancer
117719688 (Pdgfrb)
09162 Cancer: specific types
05214 Glioma
117719688 (Pdgfrb)
05218 Melanoma
117719688 (Pdgfrb)
05215 Prostate cancer
117719688 (Pdgfrb)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117719688 (Pdgfrb)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
117719688 (Pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
anu01001
]
117719688 (Pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
anu04090
]
117719688 (Pdgfrb)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117719688 (Pdgfrb)
Protein kinases [BR:
anu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117719688 (Pdgfrb)
CD molecules [BR:
anu04090
]
Proteins
117719688 (Pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117719688
NCBI-ProteinID:
XP_034373765
LinkDB
All DBs
Position
14:complement(27837174..27875089)
Genome browser
AA seq
1098 aa
AA seq
DB search
MGFPGVMPASVLRGQLLLSVLLLLGPQTSQGLVIMPPGPEFILNVSSTFVLTCSSSAPVM
WEQMSQVPWQEAAMNLDGTFSSVLTLTNVTGGDTGEYFCVYNNSLGPEFSERKRIYIFVP
DPTMGFLPMDSEDLFIFVTDITETTIPCRVTDPQLEVTLHEKKVDIPLHVPYDHQRGFTG
TFEDKTYICKTTIGDREVDSDTYYVYSLQVSSINVSVNAVQTVVRQGESITIRCIVMGND
VVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPAAELSDSGTYTCNVSVSVNDHG
DEKAINITVIENGYVRLLGTLGDVQIAELHRSRTLQVVFEAYPTPSVLWLKDNRTLGDSS
AGELVLSTRNVSETRYVSELTLVRVKVSEAGYYTMRAFHEDDEVQLSFKLQVNVPVRVLE
LSESHPANGEQTIRCRGRGMPQPNVTWSTCRDLKSRCPRKLSPTPLGNSSKEESQLETNV
TFWEEDQEYEVVSTLRLRHVDQPLSVRCMLQNSMGKDSQEVTVVPHSLPFKVVVISAILA
LVVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQRHSNKHCPPSAELYSNAL
PVGLSLPSHLNLTGESDGGYMDMSKDESVDYVPMLDMKGDIKYADIESSSYMAPYDNYVP
SAPERTYRATLINDSPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG
GTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGIHSLRSPLDTSSVLYTAVQPNESDND
YIIPLPDPKPDAADEGLPEGSPSLASSTLNEVNTSSTISCDSPLELQEEPQAEPEGQLEQ
PQDSGCPGPLAEAEDSFL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggggtttccaggtgtgatgccagcttcagtcctcagaggccaattgttgctgtctgtg
ctgttgctcctgggaccacagacctcccaaggcttagtcatcatgcctcctgggccagag
ttcatcctcaacgtctccagcacctttgttctgacctgctccagttcagctccagtgatg
tgggaacagatgtcccaggtgccctggcaagaagcggccatgaatctggacggcaccttc
tccagtgtgctgacactgactaatgtcactgggggagacactggagaatacttttgtgtc
tacaacaactcgctagggccagagttcagtgagcggaagcgcatctatatcttcgtgcca
gatcccaccatgggcttcctccctatggactctgaggacctattcatttttgtcacggat
atcactgagacgacaattccatgccgagtgacagacccccagctggaagtgacgctgcat
gagaagaaagtggatatccccctacatgtaccctatgaccaccagcgaggtttcactggt
acttttgaggacaagacttacatttgcaaaaccaccattggggacagggaagtggactcc
gatacttactatgtctacagcctccaagtgtcatccatcaatgtctctgtgaatgcagtg
cagactgtggtccgccagggtgagagcatcaccatcaggtgcattgtgatgggtaatgat
gtggtcaacttccaatggacgtaccctcgcatgaagagtggacggctggtggagccagtg
acagactacctctttggagtgccctcccgcattggctccatcctgcatatccccgctgct
gagctgagtgactccggcacctatacttgcaacgtgtcagtgagtgtgaatgaccatgga
gacgagaaagccatcaacattactgtgatcgagaatggctacgtgcggctcctgggaacc
ctgggagatgtacaaattgctgagctgcaccggagccgaacgttgcaggtggtgttcgag
gcttatccgacgccctctgtcctgtggctcaaggacaaccgtaccttgggtgattccagc
gctggcgagttggttctgtccactcgcaacgtgtctgagaccaggtatgtgtcagaactg
actttggtacgtgtgaaggtgtcagaagcaggctactatactatgcgagccttccatgag
gacgatgaggtccagctctcattcaagctacaggtcaatgtccctgtccgtgtgctggag
ctgagtgagagtcaccctgccaatggggagcagacaatccgctgtcgtggccggggcatg
cctcagccaaatgtcacctggtctacctgcagagacctcaaaagtaggtgtccacgaaaa
ctgtcacccacacccttggggaacagttccaaggaggagagccagctagaaaccaacgtg
actttctgggaggaagatcaggaatacgaggtagtgagcacactgcgcctgcgtcatgtg
gaccagccactgtcagtacgttgtatgctgcagaactcgatgggcaaagattcacaggag
gtcaccgtggttccacattccctgcccttcaaagtggtggtgatctcagccatcctggcc
ttggtggtccttactgtcatctctctcatcatcctcatcatgctgtggcagaagaagcca
cgctatgagatccgatggaaggtcattgagtccgtgagctctgacggtcatgagtacatt
tacgtggatcctgtgcagttgccttacgactccacctgggagctgccacgggaccagctt
gttctgggacgcactcttggctctggggctttcggacaggtggtggaggccacggctcat
ggtctgagccattcacaggccaccatgaaagtggccgtcaagatgctgaaatctacagcc
agaagcagcgagaagcaagccctcatgtcagagctgaaaatcatgagtcacctcggaccc
cacctgaatgtggtcaacctgctgggggcctgtaccaaaggagggcccatctacatcatc
acggaatactgccgctatggtgacctggtggactatctgcaccgcaacaaacacaccttc
ttgcagcgacactccaacaagcattgtccgcccagtgccgaactctacagcaatgccctg
ccggtggggctctctcttcccagccacttgaacctgactggggagagtgacggtggctac
atggatatgagcaaggatgaatctgtagattacgtgcccatgttggacatgaaaggagac
attaaatacgcagacattgagtcctccagctacatggccccttacgataactatgtccca
tctgcccctgaaaggacctatcgcgccaccttaatcaatgactcaccagtgctcagctac
acagacctcgtgggcttcagctaccaagtggccaatggcatggagttcttggcctcgaag
aactgcgttcaccgagacctggcggccaggaatgtgctcatctgtgaaggcaagctggtc
aagatctgtgacttcggcctggctcgagacatcatgcgggactcaaactacatctccaaa
ggcagtactttcctgcctctgaagtggatggcgccagagagcatcttcaacagcctctac
accaccttgagtgacgtgtggtcctttgggatcctgctctgggagatcttcacactgggt
ggcaccccttacccagagctgcccatgaacgaccagttctacaacgccatcaagaggggc
taccgcatggcccagcctgctcatgcctccgacgagatctatgagatcatgcagaaatgc
tgggaagaaaagtttgagactcggccccccttctcccagctggtgttgctcctggagaga
cttctgggtgagggctataaaaagaagtaccagcaggtagatgaggagtttctgaggagt
gaccatccagccatcctgaggtcccaagcccgcttgccagggatccacagcctccgatct
cctctggacaccagctctgttctctacactgccgtgcaacctaatgaaagtgacaatgac
tacatcatccccttgcctgaccccaagcctgatgctgctgatgagggcctcccagagggt
tcccccagccttgccagctccaccttgaatgaagtcaacacttcctccaccatctcctgc
gacagccccctggagctccaagaagagccgcaggcagagcctgagggacagctggagcag
ccacaggattcaggctgcccgggacctctggctgaagcagaggacagcttcctgtag
DBGET
integrated database retrieval system