KEGG   Arvicanthis niloticus (African grass rat): 117719688
Entry
117719688         CDS       T08817                                 
Symbol
Pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu01521  EGFR tyrosine kinase inhibitor resistance
anu04010  MAPK signaling pathway
anu04014  Ras signaling pathway
anu04015  Rap1 signaling pathway
anu04020  Calcium signaling pathway
anu04072  Phospholipase D signaling pathway
anu04151  PI3K-Akt signaling pathway
anu04510  Focal adhesion
anu04540  Gap junction
anu04630  JAK-STAT signaling pathway
anu04810  Regulation of actin cytoskeleton
anu05165  Human papillomavirus infection
anu05200  Pathways in cancer
anu05206  MicroRNAs in cancer
anu05214  Glioma
anu05215  Prostate cancer
anu05218  Melanoma
anu05230  Central carbon metabolism in cancer
anu05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117719688 (Pdgfrb)
   04014 Ras signaling pathway
    117719688 (Pdgfrb)
   04015 Rap1 signaling pathway
    117719688 (Pdgfrb)
   04630 JAK-STAT signaling pathway
    117719688 (Pdgfrb)
   04020 Calcium signaling pathway
    117719688 (Pdgfrb)
   04072 Phospholipase D signaling pathway
    117719688 (Pdgfrb)
   04151 PI3K-Akt signaling pathway
    117719688 (Pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117719688 (Pdgfrb)
   04540 Gap junction
    117719688 (Pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117719688 (Pdgfrb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117719688 (Pdgfrb)
   05206 MicroRNAs in cancer
    117719688 (Pdgfrb)
   05230 Central carbon metabolism in cancer
    117719688 (Pdgfrb)
   05231 Choline metabolism in cancer
    117719688 (Pdgfrb)
  09162 Cancer: specific types
   05214 Glioma
    117719688 (Pdgfrb)
   05218 Melanoma
    117719688 (Pdgfrb)
   05215 Prostate cancer
    117719688 (Pdgfrb)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    117719688 (Pdgfrb)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    117719688 (Pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:anu01001]
    117719688 (Pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:anu04090]
    117719688 (Pdgfrb)
Enzymes [BR:anu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     117719688 (Pdgfrb)
Protein kinases [BR:anu01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   117719688 (Pdgfrb)
CD molecules [BR:anu04090]
 Proteins
  117719688 (Pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 ig I-set Ig_2 V-set VEGFR-1-like_Ig-like Haspin_kinase
Other DBs
NCBI-GeneID: 117719688
NCBI-ProteinID: XP_034373765
LinkDB
Position
14:complement(27837174..27875089)
AA seq 1098 aa
MGFPGVMPASVLRGQLLLSVLLLLGPQTSQGLVIMPPGPEFILNVSSTFVLTCSSSAPVM
WEQMSQVPWQEAAMNLDGTFSSVLTLTNVTGGDTGEYFCVYNNSLGPEFSERKRIYIFVP
DPTMGFLPMDSEDLFIFVTDITETTIPCRVTDPQLEVTLHEKKVDIPLHVPYDHQRGFTG
TFEDKTYICKTTIGDREVDSDTYYVYSLQVSSINVSVNAVQTVVRQGESITIRCIVMGND
VVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPAAELSDSGTYTCNVSVSVNDHG
DEKAINITVIENGYVRLLGTLGDVQIAELHRSRTLQVVFEAYPTPSVLWLKDNRTLGDSS
AGELVLSTRNVSETRYVSELTLVRVKVSEAGYYTMRAFHEDDEVQLSFKLQVNVPVRVLE
LSESHPANGEQTIRCRGRGMPQPNVTWSTCRDLKSRCPRKLSPTPLGNSSKEESQLETNV
TFWEEDQEYEVVSTLRLRHVDQPLSVRCMLQNSMGKDSQEVTVVPHSLPFKVVVISAILA
LVVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQRHSNKHCPPSAELYSNAL
PVGLSLPSHLNLTGESDGGYMDMSKDESVDYVPMLDMKGDIKYADIESSSYMAPYDNYVP
SAPERTYRATLINDSPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG
GTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGIHSLRSPLDTSSVLYTAVQPNESDND
YIIPLPDPKPDAADEGLPEGSPSLASSTLNEVNTSSTISCDSPLELQEEPQAEPEGQLEQ
PQDSGCPGPLAEAEDSFL
NT seq 3297 nt   +upstreamnt  +downstreamnt
atggggtttccaggtgtgatgccagcttcagtcctcagaggccaattgttgctgtctgtg
ctgttgctcctgggaccacagacctcccaaggcttagtcatcatgcctcctgggccagag
ttcatcctcaacgtctccagcacctttgttctgacctgctccagttcagctccagtgatg
tgggaacagatgtcccaggtgccctggcaagaagcggccatgaatctggacggcaccttc
tccagtgtgctgacactgactaatgtcactgggggagacactggagaatacttttgtgtc
tacaacaactcgctagggccagagttcagtgagcggaagcgcatctatatcttcgtgcca
gatcccaccatgggcttcctccctatggactctgaggacctattcatttttgtcacggat
atcactgagacgacaattccatgccgagtgacagacccccagctggaagtgacgctgcat
gagaagaaagtggatatccccctacatgtaccctatgaccaccagcgaggtttcactggt
acttttgaggacaagacttacatttgcaaaaccaccattggggacagggaagtggactcc
gatacttactatgtctacagcctccaagtgtcatccatcaatgtctctgtgaatgcagtg
cagactgtggtccgccagggtgagagcatcaccatcaggtgcattgtgatgggtaatgat
gtggtcaacttccaatggacgtaccctcgcatgaagagtggacggctggtggagccagtg
acagactacctctttggagtgccctcccgcattggctccatcctgcatatccccgctgct
gagctgagtgactccggcacctatacttgcaacgtgtcagtgagtgtgaatgaccatgga
gacgagaaagccatcaacattactgtgatcgagaatggctacgtgcggctcctgggaacc
ctgggagatgtacaaattgctgagctgcaccggagccgaacgttgcaggtggtgttcgag
gcttatccgacgccctctgtcctgtggctcaaggacaaccgtaccttgggtgattccagc
gctggcgagttggttctgtccactcgcaacgtgtctgagaccaggtatgtgtcagaactg
actttggtacgtgtgaaggtgtcagaagcaggctactatactatgcgagccttccatgag
gacgatgaggtccagctctcattcaagctacaggtcaatgtccctgtccgtgtgctggag
ctgagtgagagtcaccctgccaatggggagcagacaatccgctgtcgtggccggggcatg
cctcagccaaatgtcacctggtctacctgcagagacctcaaaagtaggtgtccacgaaaa
ctgtcacccacacccttggggaacagttccaaggaggagagccagctagaaaccaacgtg
actttctgggaggaagatcaggaatacgaggtagtgagcacactgcgcctgcgtcatgtg
gaccagccactgtcagtacgttgtatgctgcagaactcgatgggcaaagattcacaggag
gtcaccgtggttccacattccctgcccttcaaagtggtggtgatctcagccatcctggcc
ttggtggtccttactgtcatctctctcatcatcctcatcatgctgtggcagaagaagcca
cgctatgagatccgatggaaggtcattgagtccgtgagctctgacggtcatgagtacatt
tacgtggatcctgtgcagttgccttacgactccacctgggagctgccacgggaccagctt
gttctgggacgcactcttggctctggggctttcggacaggtggtggaggccacggctcat
ggtctgagccattcacaggccaccatgaaagtggccgtcaagatgctgaaatctacagcc
agaagcagcgagaagcaagccctcatgtcagagctgaaaatcatgagtcacctcggaccc
cacctgaatgtggtcaacctgctgggggcctgtaccaaaggagggcccatctacatcatc
acggaatactgccgctatggtgacctggtggactatctgcaccgcaacaaacacaccttc
ttgcagcgacactccaacaagcattgtccgcccagtgccgaactctacagcaatgccctg
ccggtggggctctctcttcccagccacttgaacctgactggggagagtgacggtggctac
atggatatgagcaaggatgaatctgtagattacgtgcccatgttggacatgaaaggagac
attaaatacgcagacattgagtcctccagctacatggccccttacgataactatgtccca
tctgcccctgaaaggacctatcgcgccaccttaatcaatgactcaccagtgctcagctac
acagacctcgtgggcttcagctaccaagtggccaatggcatggagttcttggcctcgaag
aactgcgttcaccgagacctggcggccaggaatgtgctcatctgtgaaggcaagctggtc
aagatctgtgacttcggcctggctcgagacatcatgcgggactcaaactacatctccaaa
ggcagtactttcctgcctctgaagtggatggcgccagagagcatcttcaacagcctctac
accaccttgagtgacgtgtggtcctttgggatcctgctctgggagatcttcacactgggt
ggcaccccttacccagagctgcccatgaacgaccagttctacaacgccatcaagaggggc
taccgcatggcccagcctgctcatgcctccgacgagatctatgagatcatgcagaaatgc
tgggaagaaaagtttgagactcggccccccttctcccagctggtgttgctcctggagaga
cttctgggtgagggctataaaaagaagtaccagcaggtagatgaggagtttctgaggagt
gaccatccagccatcctgaggtcccaagcccgcttgccagggatccacagcctccgatct
cctctggacaccagctctgttctctacactgccgtgcaacctaatgaaagtgacaatgac
tacatcatccccttgcctgaccccaagcctgatgctgctgatgagggcctcccagagggt
tcccccagccttgccagctccaccttgaatgaagtcaacacttcctccaccatctcctgc
gacagccccctggagctccaagaagagccgcaggcagagcctgagggacagctggagcag
ccacaggattcaggctgcccgggacctctggctgaagcagaggacagcttcctgtag

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