Arvicanthis niloticus (African grass rat): 117721886
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Entry
117721886 CDS
T08817
Symbol
Psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04330
Notch signaling pathway
anu04722
Neurotrophin signaling pathway
anu05010
Alzheimer disease
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117721886 (Psen2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
117721886 (Psen2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117721886 (Psen2)
05022 Pathways of neurodegeneration - multiple diseases
117721886 (Psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117721886 (Psen2)
Peptidases and inhibitors [BR:
anu01002
]
Aspartic peptidases
Family A22: presenilin family
117721886 (Psen2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
117721886
NCBI-ProteinID:
XP_034376625
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Position
16:complement(69950411..69975381)
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AA seq
448 aa
AA seq
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MLTFMASDSEEEVCDERTSLVSAESPTSRSCQEGRLGPEDGENTAQWRSQESEEDCEEDP
DRYACSGVPGRPSGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVIMTVFLVALYKCRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLAVWNFGAVGMVCIHWKGPLVLQQAYLIVISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGTLQLPYDPEMEEDSYDSFGEPSYPEAFEAPLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGNGDWNTTLACFIAVLIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcacattcatggcctctgacagcgaggaagaggtgtgtgatgagcggacgtccttg
gtgtcagccgagagccccacatcacgctcctgccaggagggcaggctaggcccggaggat
ggagagaacactgctcagtggaggagccaggagagcgaggaagactgtgaggaggacccg
gaccgctatgcctgcagtggggttcctggacgaccatcagggctggaagaagagctgacc
ctcaagtatggcgcgaagcatgtgatcatgctgttcgtgcctgtcacgctgtgtatgatc
gtggtggtggccaccatcaagtctgtgcgtttctacacggagaagaatgggcagctcatc
tacacacccttcactgaggacacgccctccgtgggccagcggctcctcaactccgtgctc
aacactctcatcatgatcagcgtcatcgtgattatgactgtctttctagtggcactctac
aagtgtcgatgctacaagttcatccatggctggctgatcatgtcttccctgatgctcctc
ttcttgttcacctacatctacctcggggaagtgctcaagacctacaatgtggccatggac
taccccacactcttcctggctgtctggaatttcggggcagtgggcatggtgtgtatccac
tggaaggggcctctggtgctgcagcaggcttaccttattgtgatcagcgcactcatggcc
ctggtgttcattaagtacctgccggagtggtctgcctgggtcatcttgggtgccatctct
gtgtacgatctcgtggctgtgctgtgccccaaagggcctctgaggatgctggtggaaact
gcccaggaaagaaacgagcccatatttcctgccctgatatactcatctgccatggtgtgg
acggtgggcatggcaaagctggacccctcctctcaaggaacactgcagctcccctatgac
cccgagatggaagaagactcctatgacagttttggggagccctcataccctgaagccttc
gaagcccccctgcctggctacccaggggaagagctggaagaggaggaggaaaggggtgtg
aagcttggcctgggagacttcatcttctatagtgtcctggtgggcaaggcagcggccacc
ggcaatggagactggaacactacgctggcctgcttcattgctgtcctcattggtttgtgc
ctcactcttcttctgcttgccgtgttcaagaaggccctgcccgcccttcccatctccatc
acctttgggctcatcttttacttctccacagacaacctggttcgtcctttcatggacacg
ctggcctcccaccagctctacatctga
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