Arvicanthis niloticus (African grass rat): 117722207
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Entry
117722207 CDS
T08817
Symbol
Hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117722207 (Hps6)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117722207 (Hps6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
117722207
NCBI-ProteinID:
XP_034377447
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Position
1:152397240..152399919
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AA seq
805 aa
AA seq
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MKRAGTLRLLSDLSNFTGAARLRELLSGDPAVLVRCSPDGRHLLLLRPPGSPAPQLLVAV
RGPGLPLERAWPEGDPSPLDAFFVPWLARPALILVWESGLAEVWGVGMEPGWKLLQSTEL
CPAGGARVMAVAATRGRLVWCEERQPGVEDQPEQLPVDFNHCVCVKTLETSGEAGTKLGC
THILLHHCPSFGLIASRKDLFLVPTTTTWPGVAHVLLIWSPSKGKVIVAAPSLGLSHSKS
LNPKQGDTWDFRILLRGLPGFLSPREPLAVHTWAPSSKGLLLLDLKGKVSLVHCHGGTRT
VGILQEAPVGLEGSAALGTFHGTLACVLGSTLELLDMSSGQLLERKVLSTDRVHLLEPPA
PGMKNEEELEPRGALRLLSALGLFCVCWEAPQGLELPSDKDLVFEEACGYYQRRSLRGTQ
LTPEELRHNSMFRAPQALASILQGHLPPSTLLTTLRAELRDYRSIEQLKAQLVAGDDEEA
GWTELAEHEVTRLLRTQLTGEQLAQLNTIFQALPTAAWSATLQALQLQPDRSGRLRSQAP
PDVWKKVLRAPTAGKEHPNGILPPFELLCQCLGQLEPQWLPPFVKLAQQQGGPGWGAEGP
SLPLYRRALTVLGEEGKRPEALELELLLGSGRPKAVLQAIRQLIKKEQWERALEAGLALD
SSSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCPPEVAPDELLLLLRTHLPDDVGATP
FPEPGAEPPLTVGLVRALLEQTGAQGRPSGPVQSTYEDILWDSGTPPPTPPRGPTTNLQA
SDLPGKEAWVPSGQGLGAADMGVHS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcaggaactctgcgcctactttcggatctgagcaacttcaccggcgcggcc
cggctccgcgagctgttgtctggggacccagctgtcctagtccgctgcagccctgacggc
cgccacttgctgctattaagacccccgggatcgcccgccccgcaacttctagtggctgtg
cgtgggccgggcctgccgctggagcgtgcctggccggagggcgacccttcgccgctggac
gcctttttcgtgccgtggctggcgcgacccgcgctgatcttggtatgggaaagtggccta
gcagaggtatggggtgtggggatggagcctggatggaagctacttcagagcactgagttg
tgtccggctggtggagcccgcgtgatggccgtggcagcaacccgaggccgcctagtttgg
tgcgaggagcgtcagcctggcgttgaggaccaaccagagcagcttccagtggacttcaac
cactgtgtgtgcgtcaagaccctggagaccagtggggaggctggcaccaaactaggctgc
acccacatcctgctgcaccactgcccctcttttgggctgatagcctctcgcaaggacctc
ttcctggtgcctactaccaccacttggcctggtgtggcccatgttctgctcatctggagc
ccaagcaagggaaaggtaatagttgctgccccatctcttggtctttctcacagtaaaagc
ctgaatcccaaacaaggggatacttgggactttcggatcctgcttcgaggtcttcctgga
ttcctgtcccccagggagccactggcggtacacacttgggccccatcttcgaagggctta
ttgttgcttgacttgaaaggtaaggtgagcctagtgcactgccatggtggtactcgaacc
gtgggaatcctgcaggaggcccctgtgggcctagaaggctctgcagccctgggaacattt
cacggcactttagcctgtgtcctgggctccaccttggaactactggacatgagcagtggg
cagctgttggaaaggaaggttctcagtacagacagagtacatctgctggagcctccagcc
cctggcatgaagaatgaggaagagttggagccccgaggagctctccgtttgctttcagcc
ttgggtctcttttgtgtgtgttgggaagctccccaaggccttgagctgccctcagacaag
gatctggtgtttgaggaggcttgtgggtactaccagcgtcggagccttcgaggtacccag
cttaccccagaagagctgagacacaacagcatgtttcgggctcctcaggccttggcctcc
atcctccagggccacctgcccccgtctacactgttgaccaccctgagggctgagcttcga
gattatcggagtatagaacagctcaaggcccagctggtggctggggatgatgaagaggcc
ggctggactgagttagcggagcatgaggtgacacgcctgctgagaacgcagttgacagga
gaacagctggcccagttgaacaccatcttccaagcccttcctactgcagcttggagtgct
accctccaggccctgcagctccagccagataggagtggcaggctgaggtcccaagcaccc
ccagatgtatggaagaaggtactaagggccccaacggctggaaaggaacaccccaatgga
atactgccgccctttgaactcctgtgtcagtgcctaggccagctagagcctcagtggctc
cccccatttgtgaaactggcacagcaacagggtggtccaggctggggggctgaaggcccc
agtctgcccctttatcgccgagccctgacagtgctaggtgaggaagggaagagacccgag
gctctagaactcgagttgcttctgggcagtgggcgacccaaagctgtgctgcaagctata
agacagctgataaagaaggaacagtgggaacgggctctggaggccggcctggccctggac
tcctccagccccttgcttcgaagtgagatctttaagctgctgctggctgagtttgcccag
caccgccgcctcgatgcacacctccctctcctctgtcgcctgtgcccgccagaagtggct
ccagatgagctcctgcttctactgaggacacatctcccagatgatgtgggagccacccct
ttccctgagcctggagcagagccccctctcacagtcggcttggtcagagccctgctagaa
cagactggagctcaaggaaggccctctggcccagttcaaagcacctatgaggacatccta
tgggattcaggcactccaccccctaccccacctcgtggacctactactaatctccaggcg
tcagacctcccaggaaaggaagcctgggtcccatctggacaggggctcggtgcagctgac
atgggagttcattcgtag
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