Arvicanthis niloticus (African grass rat): 117723332
Help
Entry
117723332 CDS
T08817
Symbol
Adamts18
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X2
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117723332 (Adamts18)
Peptidases and inhibitors [BR:
anu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117723332 (Adamts18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
Reprolysin
ADAMTS_CR_2
TSP1_spondin
Reprolysin_5
PLAC
ADAMTS_CR_3
Reprolysin_2
TSP1_CCN
Adt-1
Reprolysin_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117723332
NCBI-ProteinID:
XP_034378774
LinkDB
All DBs
Position
18:complement(39612445..39757588)
Genome browser
AA seq
1047 aa
AA seq
DB search
MNSSSHRYLSCWPRNTTTARLQATILTSCTKGQQRRGSGGTKTTLAPSGHILTTPQVTLP
LPPRAKRQSTAIEGGKSSIFVDDARNVYAPRPPSEDAYLRFDEYGGTGRPRRSAGKSQKG
LNVETLVVADAKMVEKHGKDDVTTYILTVMNMVSSLFKDGTIGSDINIVVVSLILLEEEP
GGLLINHHADQSLNSFCQWQSALVGKNGKRHDHAILLTGFDICSWKNEPCDTLGFAPISG
MCSKYRSCTINEDTGLGLAFTIAHESGHNFGMVHDGEGNPCRKAEGNIMSPTLTGNNGVF
SWSSCSRQYLKKFLSTPQAGCLVDEPKQTGQYKYPDKLPGQIYDADTQCKWQFGAKAKLC
SLGVMKDICKSLWCHRVGHRCETKFMPAAEGTVCGLSMWCRQGQCVKLGELGPRPVHGQW
SAWSKWSECSRTCGGGVKYQERHCNNPKPQYGGKYCPGSSRIYKLCNINPCHENSLDFRA
QQCAEYNNKPFRGWLYRWRPYTKVEEDDRCKLYCKAENFEFFFAMSGKVKDGTPCSPHRN
DVCIDGICEPVGCDHELGSKAVSDACGVCKGDNSTCKFYKGLYLSQHKANEYYPVVTIPA
GARSIEIQELQLSSSYLAVRSLSQKYYLTGGWSIDWPGDFTFAGTTFEYQRSFNHPERLY
APGPTNETLVFEILTQGKNPGITWKYALPKVMNVTQPTAKRHHHTWRTVQSDCSVTCGGG
YISTKAICLRDQNTQVNSSFCSVRTKPATEPKICNAFSCPAYWLPGEWSTCSKSCAGGQQ
SRKIRCVQKKPFQKEEAVLHSLCPVSTPTQVQVCNSHACPPEWSPGPWSQCSKTCGRGVR
RREVLCKSPAAETLPESLCSSSPRPEAQEGCVLGRCPKNNRLQWIASAWSECSATCGLGV
RKRELKCIEKTLQGKLITFPERRCRNIKKPSLELEETCNRRACPVYSVAAAGWYSSPWQQ
CTVTCGGGVQTRSVHCMQQGRPSSSCLLHQKPPVLRACNTNFCPAPEKRDDPSCVDFFSW
CHLVPQHGVCNHKFYGKQCCRSCTRKS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctcatctcaccgctacctcagctgctggcccaggaacacaactacagctcgc
ctgcaggccaccatcctcacgtcctgtacaaaaggacagcagagaagagggtcaggcggt
accaagactaccctggctcccagcggacatatcctgaccactccccaagtcaccctcccc
ctgcctccccgagccaagagacagagtaccgccatcgaaggtggcaaaagcagcattttt
gtggacgacgcaagaaatgtatatgcccccaggcctccttcagaggatgcctatctacgc
tttgatgaatatggaggcacagggcggcccagacgatcagctggaaagtcccaaaagggt
ctcaacgtggagacccttgtggtggcagatgcaaagatggtggagaaacacggcaaggat
gacgtcaccacatacattctcacagtcatgaacatggtttctagcctgttcaaagatggg
accattggaagcgacataaacattgtggttgtgagcctaattctgttggaagaagaacct
ggaggattgctgatcaatcaccatgcagaccagtctctaaatagtttctgtcagtggcaa
tcagcccttgtggggaagaatggcaagaggcacgaccacgccatcctcctcacaggattt
gacatttgttcctggaagaacgaaccatgtgacacactaggatttgctcctatcagtgga
atgtgcagtaagtaccgaagctgtaccatcaatgaagacacaggacttggtcttgccttc
accatcgcacatgagtcagggcacaactttggcatggttcacgatggtgaaggtaacccc
tgcaggaaggcagaaggcaacatcatgtcacccacgctgaccggaaacaatggggtgttt
tcatggtcttcctgcagccgacagtatctaaagaaattcctcagtacaccacaggctggc
tgtctggtggatgagcccaagcaaacgggacagtataaatatccggacaaactcccggga
cagatttatgatgccgacacacagtgtaagtggcaatttggagccaaagccaagctgtgc
agccttggggttatgaaggacatttgcaaatcactctggtgccaccgcgtgggccacaga
tgcgaaaccaagttcatgcctgcagcagaagggaccgtctgcggcttgagtatgtggtgt
cggcaaggccaatgtgtaaaacttggagaacttgggccccggcccgtccatggacagtgg
tctgcctggtcgaagtggtcagaatgttctcgcacatgtggaggaggagtcaagtaccag
gagagacactgcaataaccccaagcctcagtatggtggcaagtactgcccaggatctagc
cgcatctacaagctgtgcaacattaacccttgtcatgagaatagcttggatttccgtgcc
cagcagtgtgcagagtataacaacaagcccttccggggatggttgtaccgttggagaccc
tatacaaaagttgaagaggacgatcgatgtaaactctactgcaaggcggagaactttgag
ttttttttcgccatgtctggcaaggtgaaagacgggacgccttgttccccacacagaaac
gacgtctgcatcgatgggatttgtgaaccggtaggatgcgaccatgaacttggctctaag
gcggtgtctgatgcatgtggtgtgtgcaaaggcgataactcgacctgcaagttttataaa
ggcctgtacctcagtcagcacaaagcaaatgagtattaccctgtggtcaccatcccagct
ggggcccgaagcattgagattcaggagttgcagctttcttccagctatcttgctgttcga
agcctcagtcaaaagtattacctcacagggggctggagcattgactggcctggggacttc
accttcgcagggaccacgtttgaataccagcgttcctttaaccaccctgaacgactgtat
gccccaggacccaccaatgagacgcttgtctttgaaattctgacacaaggcaagaatcca
gggatcacttggaagtatgcacttcccaaggtcatgaatgtaactcagccaacggcaaag
agacaccaccacacctggcgtacagtgcagtctgactgctcagtcacctgcggcggaggt
tacataagcaccaaggccatctgcttacgagatcaaaacactcaagtcaattcctcattc
tgcagtgtaagaaccaagccagcaacagaacccaagatatgcaatgctttctcctgccca
gcctattggttgccaggtgagtggagtacatgcagcaagtcctgtgctgggggccagcag
agccgcaagatccggtgtgtgcagaagaaacctttccagaaagaggaggctgtgctgcat
tcgctctgtccagtgagcacgcccactcaggttcaagtctgcaacagccatgcttgccct
ccagagtggagccccggcccctggtctcagtgttccaagacctgtggacgaggagtgagg
agacgtgaggtcctttgtaagagccctgcagccgagacactccccgagagcctgtgttcc
agcagccccagaccagaggcacaggagggctgcgtgctaggacgatgccccaaaaacaac
aggctccagtggatcgcctctgcatggagtgagtgttctgcaacctgtggcttgggtgtg
aggaagagagaactgaagtgtatcgagaagaccttgcaggggaaactgataacattccca
gagcggagatgccgcaacattaagaagccaagcctggaactggaagaaacctgcaaccga
agggcttgcccagtgtacagtgtggcggcggcaggctggtattcatcgccatggcaacag
tgcacagtaacctgtggtggaggggtccagacccgatctgtccactgcatgcagcaaggc
cgaccttcctcaagttgtctgctccatcagaagcctccggtgctcagagcctgtaacacc
aatttctgtccagctcctgaaaagagagatgatccgtcttgtgtggatttcttcagctgg
tgtcacctggtccctcagcatggagtctgcaaccacaaattttatggaaaacagtgctgt
agatcatgcacaaggaagagctaa
DBGET
integrated database retrieval system
