KEGG   Arvicanthis niloticus (African grass rat): 117724568
Entry
117724568         CDS       T08817                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, I-E alpha chain-like
  KO
K06752  MHC class II antigen
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04145  Phagosome
anu04514  Cell adhesion molecules
anu04612  Antigen processing and presentation
anu04640  Hematopoietic cell lineage
anu04658  Th1 and Th2 cell differentiation
anu04659  Th17 cell differentiation
anu04672  Intestinal immune network for IgA production
anu04940  Type I diabetes mellitus
anu05140  Leishmaniasis
anu05145  Toxoplasmosis
anu05150  Staphylococcus aureus infection
anu05152  Tuberculosis
anu05164  Influenza A
anu05166  Human T-cell leukemia virus 1 infection
anu05168  Herpes simplex virus 1 infection
anu05169  Epstein-Barr virus infection
anu05310  Asthma
anu05320  Autoimmune thyroid disease
anu05321  Inflammatory bowel disease
anu05322  Systemic lupus erythematosus
anu05323  Rheumatoid arthritis
anu05330  Allograft rejection
anu05332  Graft-versus-host disease
anu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117724568
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117724568
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    117724568
   04612 Antigen processing and presentation
    117724568
   04658 Th1 and Th2 cell differentiation
    117724568
   04659 Th17 cell differentiation
    117724568
   04672 Intestinal immune network for IgA production
    117724568
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    117724568
   05164 Influenza A
    117724568
   05168 Herpes simplex virus 1 infection
    117724568
   05169 Epstein-Barr virus infection
    117724568
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    117724568
   05152 Tuberculosis
    117724568
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    117724568
   05140 Leishmaniasis
    117724568
  09163 Immune disease
   05310 Asthma
    117724568
   05322 Systemic lupus erythematosus
    117724568
   05323 Rheumatoid arthritis
    117724568
   05320 Autoimmune thyroid disease
    117724568
   05321 Inflammatory bowel disease
    117724568
   05330 Allograft rejection
    117724568
   05332 Graft-versus-host disease
    117724568
  09166 Cardiovascular disease
   05416 Viral myocarditis
    117724568
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    117724568
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:anu04147]
    117724568
Exosome [BR:anu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117724568
  Exosomal proteins of epithelial cells
   117724568
  Exosomal proteins of breast milk
   117724568
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3
Other DBs
NCBI-GeneID: 117724568
NCBI-ProteinID: XP_034380357
LinkDB
Position
20:complement(48677695..48683833)
AA seq 256 aa
MPLSRALILGVLALATVLSRCGGEDDIEADHVASYGALFYQSYGPNGQYWFEFDGDELFY
VDLDKRETVWRIPEFGKQTSFDPQGGLQQISVGRQNLDTLTKETNSTPATNKAPEATVFP
KSPVLLGQPNTLICFVNNIFPPVISITWLRNSESVTEGVYETNFLLSRDYSFHKMSYLTF
IPSDDDVYDCKVEHWGLDKPVLKHWEPEILAPMSELTETVVCALGLSVGIVGIMVGTIFI
IQGLRSGGTSRHPGPL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgccactcagcagagctctgattctgggggtcctcgccctggccaccgtgctcagccgc
tgtggcggtgaagacgacattgaggctgaccatgtagcctcctatggtgcacttttctat
cagtcttatggacccaatggccagtactggtttgaatttgatggtgacgagttattttat
gtggacttggataagagggagacagtctggaggattcccgagtttggcaaacagacaagc
tttgacccccaaggtggattgcaacagatatctgtaggaagacagaacttggacaccctg
actaaggagaccaattccaccccagctaccaacaaggctcctgaggcgaccgtgttcccc
aagtcccctgtgctgctgggtcagcccaacaccctcatctgctttgtgaacaacatcttc
cctcccgtgatcagcatcacatggttgagaaacagcgagtcagtcacagaaggcgtttat
gagacgaacttcctcctcagccgtgactattccttccacaagatgtcttacctcaccttc
atcccttctgacgatgacgtgtacgactgcaaggtggaacactggggcctggacaagccg
gttctcaaacactgggaacctgagattctggcccccatgtcagagctgacagagactgtg
gtctgtgccctggggttgtctgtgggcattgtgggcatcatggtgggcaccatcttcatc
attcaaggcctgcgatcaggtggcacctcaagacaccctgggcccttatga

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